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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:13866.7 nTPM
HPA Brain:26358.3 nTPM
GTEx:13866.7 nTPM
FANTOM5:24280.6 Scaled Tags Per Million
Pig:11337.9 nTPM
Mouse:4308.1 nTPM
Allen mouse:16.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA049222Antibody CAB002300
Glial cells LowHigh
Neuronal cells Not detectedNot detected




BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26358.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4147.7
2288 Male, age 75, left hemisphere 6992.6
2846 Female, age 79, unknown 6218.6
1781 Male, age 74, unknown 4825.2
2290 Female, age 72, unknown 3942.2
1854 Male, age 80, left hemisphere 3935.6
2289 Male, age 61, right hemisphere 2862.1
2481 Female, age 94, left hemisphere 2535.6
1857 Female, age 85, left hemisphere 1870.0
Globus pallidus, externus
nTPM: 26358.3
2567 Female, age 72, unknown 38416.1
2646 Male, age 61, right hemisphere 38411.7
1996 Male, age 80, right hemisphere 22955.4
2772 Female, age 79, unknown 17283.9
2395 Male, age 75, both hemispheres 14724.5
Globus pallidus, internus
nTPM: 25284.2
2111 Female, age 85, right hemisphere 37168.3
2566 Female, age 72, unknown 34274.8
2778 Female, age 91, both hemispheres 26470.6
1818 Male, age 74, unknown 20308.9
2287 Male, age 75, right hemisphere 20151.3
2483 Female, age 94, right hemisphere 19855.3
2037 Male, age 80, right hemisphere 18760.0
Nucleus accumbens
nTPM: 6417.9
2698 Female, age 72, unknown 12666.4
2732 Male, age 80, right hemisphere 10614.3
2391 Female, age 94, left hemisphere 9026.7
1806 Female, age 85, left hemisphere 4867.3
2286 Male, age 75, left hemisphere 4352.7
1783 Male, age 74, unknown 4337.1
2824 Male, age 61, right hemisphere 3506.0
1856 Female, age 91, right hemisphere 1972.8
Nucleus basalis of Meynert
nTPM: 16465.5
2569 Male, age 61, both hemispheres 41414.2
2821 Male, age 75, both hemispheres 10680.2
2484 Female, age 94, left hemisphere 8712.4
2393 Male, age 80, right hemisphere 5055.1
Nucleus of the diagonal band
nTPM: 2471.6
1812 Female, age 91, both hemispheres 5629.1
1979 Male, age 74, unknown 2439.9
2029 Male, age 61, right hemisphere 1711.2
2775 Male, age 80, right hemisphere 1347.1
2195 Female, age 85, both hemispheres 1230.6
Putamen
nTPM: 6892.2
2647 Male, age 75, left hemisphere 13571.4
2489 Female, age 72, unknown 10171.3
1829 Male, age 74, unknown 9506.0
1937 Female, age 91, right hemisphere 5471.1
2466 Female, age 79, unknown 4347.3
2482 Female, age 94, left hemisphere 3719.4
1838 Male, age 80, right hemisphere 1459.2
Septal nuclei
nTPM: 3653.5
2394 Male, age 61, left hemisphere 7528.8
2199 Male, age 80, right hemisphere 5601.1
2629 Female, age 94, right hemisphere 3609.2
2059 Female, age 85, both hemispheres 3174.0
2009 Female, age 91, both hemispheres 2386.1
2031 Female, age 72, unknown 2124.8
1960 Male, age 74, unknown 1150.3
Stria terminalis, bed nucleus
nTPM: 3497.5
2201 Male, age 74, unknown 4709.9
1974 Female, age 91, both hemispheres 4250.9
2486 Female, age 94, both hemispheres 1531.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

13866.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 6498.5
Samples: 246

Max nTPM: 47323.3
Min nTPM: 702.0
Std nTPM: 5934.2
Median nTPM: 4538.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 47323.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 34332.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 30696.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 28333.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 25592.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 20283.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 20009.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 19301.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 18775.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 18755.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 17560.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17304.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 17026.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 16990.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 16576.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 16170.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 16068.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 15973.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 15873.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 15761.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 15518.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 15283.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 14687.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 14505.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 13650.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 12375.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 12300.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 12279.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 12258.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 12197.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 12094.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 11835.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 11688.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 11620.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 11591.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 11508.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 11505.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 11449.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 11272.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 11060.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 10672.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 10512.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 10398.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 10195.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 10130.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 9989.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 9953.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 9912.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 9748.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 9677.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 9508.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 9317.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 9252.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 9001.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 8974.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 8964.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 8854.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 8694.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 8636.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 8461.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 8457.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 8456.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 8225.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 8163.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 8148.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 8093.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 8038.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 7979.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 7960.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 7843.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 7754.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 7727.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 7696.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 7602.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 7576.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 7541.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 7530.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 7472.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 7339.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 7278.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 6972.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 6969.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 6887.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 6841.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 6813.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 6780.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 6629.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 6264.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 6155.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 6081.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 5856.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 5839.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 5768.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 5766.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 5675.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 5645.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 5640.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 5576.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 5558.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 5463.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 5396.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 5228.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 5211.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 5204.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 5179.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 5149.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 5119.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 5092.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 5085.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 5079.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 5057.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 5049.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 4973.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 4950.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 4921.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 4899.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 4877.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 4869.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 4842.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 4747.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 4711.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 4669.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 4551.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 4524.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 4483.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 4443.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 4435.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 4403.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 4384.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 4376.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 4315.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 4303.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 4186.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 4123.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 4103.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 4064.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 4043.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 3939.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 3922.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 3916.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 3891.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 3882.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 3864.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 3856.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 3853.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 3847.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 3799.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 3759.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 3723.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 3721.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 3706.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 3704.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 3674.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 3643.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 3576.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 3475.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 3472.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 3446.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 3435.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 3400.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 3391.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 3358.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 3317.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 3316.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 3261.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 3180.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 3167.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 3063.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 3062.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 3057.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 3055.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 3053.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 3053.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 3031.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 3015.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 2935.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 2814.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 2801.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 2760.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 2732.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 2730.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 2728.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 2718.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2600.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 2599.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 2576.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 2551.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 2536.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 2527.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 2517.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 2504.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 2488.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 2484.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 2451.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 2441.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 2435.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 2431.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 2345.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 2302.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 2296.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 2278.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 2216.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 2214.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 2175.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 2162.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 2160.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 2152.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 2058.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 2041.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 2008.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1990.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1974.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1968.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1949.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1888.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 1858.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 1852.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1824.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 1821.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1796.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 1777.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1769.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1743.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1706.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1689.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 1683.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1668.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 1642.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1523.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1522.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1481.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 1464.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 1459.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 1419.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 1395.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1373.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1344.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 1280.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1219.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 1123.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1116.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 1038.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 974.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 816.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 702.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 702.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 6367.8
Samples: 246

Max nTPM: 44168.6
Min nTPM: 112.9
Std nTPM: 7937.4
Median nTPM: 3434.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 44168.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 43721.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 43659.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 42800.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 41103.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 38471.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 31129.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 26033.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 23633.5
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 23296.7
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 22960.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 21673.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 21143.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 21045.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 20036.6
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 19823.0
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 19577.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 19384.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 18759.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 18248.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 16909.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 16547.1
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 16049.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 15806.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 15592.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 14914.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 14584.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 14307.0
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 14022.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 13784.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 13360.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 12970.2
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 12881.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 12825.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 12559.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 11395.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 11319.5
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 11317.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 10921.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 10817.9
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 10517.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 10401.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 10305.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 10252.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 10093.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 9771.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 9624.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 9466.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 9441.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 9146.9
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 9066.7
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 8916.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 8842.5
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 8617.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 8472.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 8322.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 8210.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 8144.8
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 7781.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 7708.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 7696.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 7661.9
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 7456.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 7431.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 7431.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 7327.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 7253.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 7237.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 7051.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 6941.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 6911.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 6802.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 6657.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 6496.7
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 6488.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 6473.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 6299.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 6260.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 6155.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 6131.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 6005.8
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 5987.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 5824.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 5807.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 5755.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 5578.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 5526.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 5328.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 5259.6
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 5241.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 5215.2
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 5173.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 5171.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 5123.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 4939.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 4756.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 4714.8
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 4704.0
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 4650.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 4642.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 4493.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 4444.9
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 4395.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 4366.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 4272.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 4270.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 4242.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 4195.7
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 4184.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 4121.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 4111.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 4052.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 3980.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 3869.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 3869.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 3788.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 3690.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 3631.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 3604.2
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 3545.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 3537.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 3504.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 3450.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 3417.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 3386.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 3239.8
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 3230.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 3207.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 3196.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 3111.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 3089.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 3086.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 3070.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 3057.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 3038.3
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 3032.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 2955.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 2944.5
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 2933.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 2885.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 2795.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 2697.8
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 2696.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 2659.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 2640.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 2622.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 2604.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 2597.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 2574.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 2545.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 2544.1
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 2506.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 2431.5
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 2410.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 2395.8
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 2354.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 2310.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 2309.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 2297.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 2291.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 2281.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 2249.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 2231.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 2230.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 2221.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 2214.9
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 2179.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 2163.3
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 2154.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 2103.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 2013.8
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 2002.1
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 1912.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 1876.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 1845.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 1783.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 1733.9
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 1723.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 1688.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 1657.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 1626.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 1617.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 1609.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 1592.9
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 1581.2
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 1561.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 1525.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 1519.9
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 1492.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 1460.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 1454.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 1445.6
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 1432.0
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 1422.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 1409.2
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 1395.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 1386.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 1381.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 1331.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 1305.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 1277.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 1258.3
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 1245.7
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 1241.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 1238.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 1232.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 1225.8
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 1224.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 1223.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 1169.1
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 1164.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 1164.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 1135.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 1116.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 1109.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 1042.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 1019.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 1002.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 992.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 992.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 984.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 979.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 977.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 964.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 911.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 881.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 880.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 861.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 834.5
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 792.7
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 756.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 755.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 755.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 749.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 742.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 649.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 621.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 612.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 585.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 583.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 536.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 534.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 509.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 503.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 496.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 112.9
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Brain - Putamen (basal ganglia)
Average nTPM: 13866.7
Samples: 205

Max nTPM: 73495.6
Min nTPM: 1449.2
Std nTPM: 11107.0
Median nTPM: 11110.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 73495.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 70235.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 63448.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 54377.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 46056.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 44385.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 42572.0
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 37919.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 36641.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 34099.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 33581.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 31423.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 31250.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 30793.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 29408.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 26385.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 25763.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 25711.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 25412.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 24925.7
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 24179.1
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 23943.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 23868.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 23828.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 23764.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 23559.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 23406.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 23085.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 22857.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 22584.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 22434.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 22207.5
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 22075.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 21662.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 21593.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 21377.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 21286.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 21259.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 20428.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 20205.2
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 20044.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 19909.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 19589.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 18977.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 18771.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 18459.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 18317.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 18153.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 17911.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 17895.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 17465.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 17413.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 17288.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 17063.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 16932.1
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 16870.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 16539.1
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 16392.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 16043.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 16014.8
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 15848.6
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 15509.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 15504.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 15418.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 15343.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 15143.7
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 15130.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 15062.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 14850.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 14354.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 14025.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 13729.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 13577.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 13553.2
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 13518.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 13505.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 13452.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 13338.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 13190.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 13135.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 13135.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 12946.5
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 12942.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 12680.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 12633.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 12625.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12544.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 12540.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 12327.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 12196.6
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 12173.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 12048.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 11987.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 11898.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 11746.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 11659.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 11585.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 11524.9
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 11423.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 11315.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 11243.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 11238.9
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 11110.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 11095.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 11064.8
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 10748.8
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 10695.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 10674.0
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 10635.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 10581.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 10490.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 10403.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 10341.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 10200.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 10111.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 9910.7
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 9894.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 9893.3
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 9864.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 9853.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 9805.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 9742.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 9729.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 9721.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 9683.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 9497.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 9369.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 9323.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 9208.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 9151.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 9092.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 9071.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 8838.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 8825.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 8473.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 8462.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 8384.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 8197.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 8116.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 8049.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 7912.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 7871.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 7850.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 7677.8
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 7649.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 7616.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 7609.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 7550.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 7489.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 7476.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 7453.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 7304.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 7005.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 6859.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 6853.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 6799.0
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 6650.9
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 6573.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 6511.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 6501.4
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 6450.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 6429.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 6220.2
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 6190.8
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 6118.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 5802.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 5472.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 5414.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 5379.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 5318.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 5203.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 5172.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 5102.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 5006.7
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 4872.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 4681.9
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 4469.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 4399.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 4314.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 4267.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 4202.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 3948.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 3898.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 3895.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 3670.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 3626.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 3623.4
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 3516.3
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 3483.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 3446.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 3390.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 3340.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 3292.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 3161.7
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 3155.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 3028.9
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 2617.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 2351.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 2239.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 2180.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 2148.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 2136.2
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 2048.1
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 1841.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 1449.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

24280.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 2463.2
FF:10164-103B2 76 years, female 2463.2
Nucleus accumbens
Scaled Tags Per Million: 10283.5
FF:10037-101F1 23-56 years, mixed 10283.5
Putamen
Scaled Tags Per Million: 3671.2
FF:10176-103C5 60 years, female 3671.2
Globus pallidus
Scaled Tags Per Million: 24280.6
FF:10161-103A8 76 years, female 28580.1
FF:10175-103C4 60 years, female 19981.0

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

11337.9
Pig sample Sample description nTPM
Caudate
nTPM: 2206.4
Samples: 4

Max nTPM: 2575.7
Min nTPM: 1795.0
Sample A Female 1989.2
Sample B Female 1795.0
Sample C Male 2575.7
Sample D Male 2465.8
Putamen
nTPM: 11337.9
Samples: 4

Max nTPM: 16413.7
Min nTPM: 4973.9
Sample A Female 16413.7
Sample B Female 4973.9
Sample C Male 9144.3
Sample D Male 14819.5
Septum
nTPM: 5322.3
Samples: 4

Max nTPM: 7588.5
Min nTPM: 3660.4
Sample A Female 4738.5
Sample B Female 3660.4
Sample C Male 5301.7
Sample D Male 7588.5
Ventral pallidum
nTPM: 8118.0
Samples: 4

Max nTPM: 12262.7
Min nTPM: 2094.4
Sample A Female 2094.4
Sample B Female 6509.4
Sample C Male 12262.7
Sample D Male 11605.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

4308.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 4308.2
Samples: 4

Max nTPM: 4599.8
Min nTPM: 3986.1
Sample A Male 3986.1
Sample B Male 4552.2
Sample C Female 4599.8
Sample D Female 4094.5
Septum
nTPM: 3807.0
Samples: 4

Max nTPM: 5385.7
Min nTPM: 2352.2
Sample A Male 2352.2
Sample B Male 3093.4
Sample C Female 4396.8
Sample D Female 5385.7
Ventral forebrain
nTPM: 2219.9
Samples: 4

Max nTPM: 2388.5
Min nTPM: 1810.1
Sample A Male 2301.4
Sample B Male 1810.1
Sample C Female 2388.5
Sample D Female 2379.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 12.6
112202838 Antisense, RP_110421_01_F01, Mouse strain C57BL/6J (56 days, male) 16.0
79632288 Antisense, RP_071204_01_C03, Mouse strain C57BL/6J (56 days, male) 9.3
Pallidum
Expression energy: 16.2
112202838 Antisense, RP_110421_01_F01, Mouse strain C57BL/6J (56 days, male) 20.5
79632288 Antisense, RP_071204_01_C03, Mouse strain C57BL/6J (56 days, male) 11.8

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