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TISSUE PRIMARY DATA HYPOTHALAMUS Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Hypothalamus
HYPOTHALAMUS - Expression summary
Mouse brain, Intensity
Hypothalamusi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

141.917
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:15879.3 nTPM
HPA Brain:15859.4 nTPM
GTEx:15879.3 nTPM
Pig:6931.8 nTPM
Mouse:2728.5 nTPM
Allen mouse:14.9 Expression energy

HYPOTHALAMUS - Mouse brain profilei

Protein expression in mouse brain using immunofluorescence is reported as fluorescence intensity .

, antibody HPA049222
Hypothalamus mean intensity 141.917
intensityi

Protein expression in mouse brain using immunofluorescence is reported as mean fluorescence intensity .

FRONT BACK
Dorsal tuberomammillary nucleus 75.412
Mammillary nucleus 61.022
Periventricular hypothalamic nucleus 134.305
Supraoptic nucleus 141.917
Tuberal nucleus 83.219
Ventral tuberomammillary nucleus 136.243
Lateral preoptic area 55.423
Medial preoptic area 60.697
Suprachiasmatic nucleus 96.830
Paraventricular hypothalamic nucleus 140.998
Anterior hypothalamic area, central 122.940
Ventral medial hypothalamic nucleus 110.133
Ventral medial hypothalamic nucleus* -
Arcuate nucleus 121.746
Arcuate nucleus* -
Peduncular part of lateral hypothalmus 92.997
Dorsal medial hypothalamic nucleus 124.820
Stria terminalis* -

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15859.4
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 1249.6
2226 Male, age 75, left hemisphere 1545.8
1961 Female, age 42, unknown 953.5
Dorsomedial nucleus
nTPM: 4717.5
2017 Female, age 42, unknown 8771.1
1989 Male, age 62, unknown 4242.8
2041 Female, age 72, unknown 1138.6
Lateral hypothalamic area
nTPM: 7276.7
2412 Male, age 62, unknown 9274.8
2271 Male, age 75, both hemispheres 8170.3
2228 Male, age 66, unknown 7454.5
1791 Male, age 80, right hemisphere 4207.3
Mammillary body
nTPM: 12841.6
1948 Female, age 72, unknown 16884.7
1945 Male, age 80, right hemisphere 16452.0
1834 Female, age 42, unknown 15800.1
2413 Male, age 66, unknown 7895.1
1923 Female, age 72, unknown 7176.3
Paraventricular nucleus
nTPM: 15859.4
2700 Male, age 62, unknown 15859.4
Preoptic area
nTPM: 8890.6
2414 Female, age 72, unknown 15869.9
1861 Female, age 42, unknown 9552.8
1907 Male, age 80, right hemisphere 1249.0
Supraoptic nucleus
nTPM: 8251.4
2043 Male, age 62, unknown 12048.6
2835 Female, age 72, unknown 6971.5
1894 Female, age 72, unknown 5734.2
Ventromedial nucleus
nTPM: 1019.9
1982 Female, age 72, unknown 1146.5
1822 Female, age 42, unknown 893.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

15879.3
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 15879.3
Samples: 202

Max nTPM: 169729.7
Min nTPM: 235.0
Std nTPM: 21199.9
Median nTPM: 9265.0
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 169729.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 121519.4
GTEX-NL3H-0011-R8a-SM-DIPDY 60-69 years, male 100340.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 94526.3
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 76657.7
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 74629.0
GTEX-183WM-0011-R8a-SM-7189W 70-79 years, female 57695.1
GTEX-145MI-0011-R8b-SM-5PNZ9 60-69 years, female 57181.7
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 56370.5
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 53647.6
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 53045.4
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 52635.8
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 52547.4
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 51829.3
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 49018.1
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 47425.5
GTEX-N7MT-0011-R8a-SM-2I5GU 60-69 years, female 39765.5
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 38471.1
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 37407.4
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 36841.6
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 36571.9
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 36383.0
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 34701.8
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 33973.5
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 31731.4
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 31349.0
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 31029.3
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 30964.7
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 30088.0
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 29907.1
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 29809.0
GTEX-XLM4-0011-R8A-SM-4AT44 60-69 years, male 29155.9
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 28297.3
GTEX-R55E-0011-R8A-SM-2TC66 20-29 years, male 27340.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 25386.9
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 25009.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 24608.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 24544.8
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 24300.3
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 23706.9
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 22619.6
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 21538.9
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 21364.9
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 21136.4
GTEX-TSE9-0011-R8A-SM-3DB7R 60-69 years, female 20746.1
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 19457.2
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 19168.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 18678.3
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 18669.3
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 18658.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 18553.1
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 18433.3
GTEX-Q2AG-0011-R8A-SM-2HMK5 40-49 years, female 17792.8
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 17507.1
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 17290.5
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 17167.0
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 17130.8
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 16958.5
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 16938.2
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 16679.2
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 16675.3
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 15664.9
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 15562.8
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 15433.2
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 15373.1
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 14870.9
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 14811.9
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 14794.2
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 14434.9
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 13942.7
GTEX-QDT8-0011-R8A-SM-32PKE 30-39 years, female 13871.9
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 13834.1
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 13670.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 13398.7
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 13322.5
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 13310.2
GTEX-OHPN-0011-R8A-SM-33HBT 60-69 years, female 13305.0
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 13198.6
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 13195.5
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 12982.7
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 12405.7
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 12252.2
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 12114.1
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 12083.2
GTEX-13NZ8-0011-R8b-SM-5KM48 60-69 years, female 12029.2
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 11936.4
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 11683.2
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 11193.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 10957.2
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 10883.3
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 10845.0
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 10666.2
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 10610.2
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 10503.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 10206.2
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 9994.3
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 9959.0
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 9831.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 9688.0
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 9643.5
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 9587.4
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 8942.6
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 8921.4
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 8745.1
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 8256.3
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 8228.4
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 8205.1
GTEX-NPJ7-0011-R8a-SM-2I3G2 60-69 years, female 8039.3
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 7753.3
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 7670.3
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 7133.4
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 7055.5
GTEX-18464-0011-R8a-SM-72D4Z 50-59 years, male 6816.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 6764.7
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 6573.8
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 6531.9
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 6329.8
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 6028.1
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 6004.7
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 5957.7
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 5912.0
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 5874.4
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 5834.2
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 5802.6
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 5715.7
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 5699.9
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 5562.3
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 5486.0
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 5438.4
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 5423.9
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 5381.4
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 5376.5
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 5324.7
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 5247.3
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 5164.5
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 5134.2
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 5008.2
GTEX-13IVO-0011-R8a-SM-5L3DY 70-79 years, male 4758.4
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 4739.3
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 4690.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 4620.1
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 4513.5
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 4481.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 4400.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 4238.6
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 4217.2
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 4187.5
GTEX-RU72-0011-R8A-SM-2TF61 50-59 years, female 4159.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 4105.1
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 4089.6
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 3937.7
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 3873.2
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 3858.0
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 3697.3
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 3631.7
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 3628.6
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 3459.4
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 3436.0
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 3404.1
GTEX-S7SE-0011-R8A-SM-2XCDG 50-59 years, male 3338.7
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 3208.8
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 3197.8
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 3130.3
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 3037.9
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 2886.3
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 2841.4
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 2822.4
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 2775.5
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 2661.5
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 2654.6
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 2604.4
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 2562.6
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 2494.9
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 2437.2
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 2322.9
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 2281.9
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 2211.2
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 2152.4
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 2016.6
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 2014.0
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 1999.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 1928.1
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 1872.6
GTEX-1H3VE-0011-R8b-SM-A9G1L 40-49 years, male 1870.2
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 1824.2
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 1575.8
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 1444.4
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 1436.3
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 1416.6
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 1336.8
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 1303.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 1197.9
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 1156.7
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 1143.5
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 1082.8
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 936.0
GTEX-X4EP-0011-R8B-SM-4QASL 60-69 years, female 816.4
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 778.6
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 778.1
GTEX-14LLW-0011-R8a-SM-62LFG 70-79 years, female 633.2
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 362.3
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 235.0
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

6931.8
Pig sample Sample description nTPM
Hypothalamus
nTPM: 6931.8
Samples: 4

Max nTPM: 9418.2
Min nTPM: 2495.0
Sample A Female 7279.4
Sample B Female 8534.7
Sample C Male 9418.2
Sample D Male 2495.0

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

2728.5
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 2728.5
Samples: 4

Max nTPM: 3298.5
Min nTPM: 2116.4
Sample A Male 2116.4
Sample B Male 2465.0
Sample C Female 3034.0
Sample D Female 3298.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

14.9
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 14.9
112202838 Antisense, RP_110421_01_F01, Mouse strain C57BL/6J (56 days, male) 19.3
79632288 Antisense, RP_071204_01_C03, Mouse strain C57BL/6J (56 days, male) 10.5

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