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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:455.7 nTPM
HPA Brain:156.6 nTPM
GTEx:455.7 nTPM
FANTOM5:54.5 Scaled Tags Per Million
Pig:316.2 nTPM
Mouse:883.5 nTPM
Allen mouse:7.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA000857
Glial cells Not detected
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

156.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 129.5
2846 Female, age 79, unknown 164.0
1854 Male, age 80, left hemisphere 139.3
1781 Male, age 74, unknown 137.9
2290 Female, age 72, unknown 133.2
2288 Male, age 75, left hemisphere 131.0
1857 Female, age 85, left hemisphere 126.9
2481 Female, age 94, left hemisphere 113.3
2289 Male, age 61, right hemisphere 90.2
Globus pallidus, externus
nTPM: 156.6
1996 Male, age 80, right hemisphere 201.7
2772 Female, age 79, unknown 173.2
2395 Male, age 75, both hemispheres 161.3
2646 Male, age 61, right hemisphere 127.6
2567 Female, age 72, unknown 119.4
Globus pallidus, internus
nTPM: 156.5
2483 Female, age 94, right hemisphere 189.9
2287 Male, age 75, right hemisphere 188.9
2037 Male, age 80, right hemisphere 169.7
2778 Female, age 91, both hemispheres 152.3
1818 Male, age 74, unknown 137.3
2566 Female, age 72, unknown 132.4
2111 Female, age 85, right hemisphere 125.0
Nucleus accumbens
nTPM: 134.9
2698 Female, age 72, unknown 176.9
1856 Female, age 91, right hemisphere 142.2
1783 Male, age 74, unknown 138.8
2391 Female, age 94, left hemisphere 137.5
1806 Female, age 85, left hemisphere 127.2
2732 Male, age 80, right hemisphere 126.0
2286 Male, age 75, left hemisphere 120.5
2824 Male, age 61, right hemisphere 110.4
Nucleus basalis of Meynert
nTPM: 140.1
2821 Male, age 75, both hemispheres 161.4
2484 Female, age 94, left hemisphere 137.0
2569 Male, age 61, both hemispheres 134.2
2393 Male, age 80, right hemisphere 127.8
Nucleus of the diagonal band
nTPM: 121.2
1979 Male, age 74, unknown 146.8
2775 Male, age 80, right hemisphere 125.3
1812 Female, age 91, both hemispheres 125.2
2195 Female, age 85, both hemispheres 104.8
2029 Male, age 61, right hemisphere 104.0
Putamen
nTPM: 123.9
2482 Female, age 94, left hemisphere 141.6
1838 Male, age 80, right hemisphere 133.8
2466 Female, age 79, unknown 125.8
1937 Female, age 91, right hemisphere 119.8
2647 Male, age 75, left hemisphere 117.5
2489 Female, age 72, unknown 115.2
1829 Male, age 74, unknown 113.9
Septal nuclei
nTPM: 119.1
2199 Male, age 80, right hemisphere 142.8
2629 Female, age 94, right hemisphere 128.0
1960 Male, age 74, unknown 120.4
2031 Female, age 72, unknown 117.8
2394 Male, age 61, left hemisphere 112.0
2009 Female, age 91, both hemispheres 110.7
2059 Female, age 85, both hemispheres 102.0
Stria terminalis, bed nucleus
nTPM: 102.0
1974 Female, age 91, both hemispheres 109.7
2201 Male, age 74, unknown 109.0
2486 Female, age 94, both hemispheres 87.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

455.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 368.4
Samples: 246

Max nTPM: 830.4
Min nTPM: 193.3
Std nTPM: 97.2
Median nTPM: 356.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 830.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 703.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 690.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 659.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 654.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 606.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 593.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 588.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 585.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 580.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 577.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 570.5
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 568.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 565.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 557.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 551.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 549.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 545.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 530.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 527.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 505.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 503.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 490.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 487.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 487.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 480.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 475.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 473.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 467.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 465.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 463.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 459.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 457.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 457.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 456.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 453.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 453.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 449.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 449.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 448.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 443.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 438.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 438.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 436.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 434.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 434.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 433.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 433.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 433.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 433.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 430.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 430.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 427.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 425.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 424.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 424.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 423.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 420.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 419.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 418.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 417.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 416.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 415.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 413.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 413.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 412.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 409.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 407.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 407.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 404.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 403.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 403.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 402.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 402.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 401.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 399.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 396.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 395.6
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 394.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 394.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 394.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 393.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 392.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 391.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 391.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 391.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 391.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 390.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 388.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 388.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 386.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 385.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 385.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 383.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 379.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 377.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 376.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 376.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 374.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 374.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 373.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 373.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 371.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 370.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 369.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 369.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 368.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 368.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 368.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 367.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 366.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 365.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 363.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 363.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 362.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 362.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 362.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 361.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 361.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 359.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 358.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 357.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 357.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 355.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 354.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 354.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 351.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 351.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 349.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 349.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 349.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 349.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 348.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 346.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 345.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 343.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 342.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 341.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 340.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 340.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 339.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 337.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 337.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 336.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 336.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 335.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 334.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 334.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 333.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 331.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 331.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 331.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 329.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 327.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 325.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 325.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 325.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 322.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 322.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 321.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 321.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 320.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 318.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 316.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 313.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 313.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 312.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 311.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 310.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 308.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 308.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 307.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 306.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 302.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 302.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 301.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 301.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 301.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 300.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 298.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 298.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 298.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 297.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 296.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 294.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 294.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 292.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 292.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 291.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 291.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 291.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 290.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 289.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 289.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 288.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 288.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 286.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 286.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 284.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 284.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 283.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 281.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 281.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 279.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 279.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 279.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 279.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 279.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 278.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 273.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 272.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 272.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 271.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 270.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 269.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 269.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 269.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 267.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 267.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 267.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 265.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 263.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 263.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 262.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 262.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 262.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 261.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 261.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 259.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 256.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 255.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 254.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 250.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 247.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 246.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 242.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 241.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 239.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 237.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 234.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 230.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 226.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 224.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 211.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 203.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 193.3
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 455.7
Samples: 246

Max nTPM: 1565.0
Min nTPM: 215.9
Std nTPM: 142.9
Median nTPM: 436.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 1565.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 1135.9
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 881.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 825.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 817.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 776.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 745.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 720.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 710.2
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 703.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 702.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 695.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 692.9
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 683.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 671.2
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 669.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 668.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 635.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 634.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 629.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 615.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 607.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 604.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 601.4
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 597.2
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 596.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 594.5
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 589.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 585.0
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 582.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 582.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 581.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 576.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 576.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 572.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 568.2
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 564.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 564.4
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 560.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 559.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 552.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 551.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 551.7
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 551.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 551.0
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 549.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 541.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 539.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 538.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 534.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 531.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 530.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 530.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 527.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 523.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 523.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 523.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 520.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 519.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 518.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 516.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 515.8
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 514.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 511.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 511.4
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 509.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 507.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 507.0
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 506.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 505.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 504.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 502.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 500.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 499.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 497.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 496.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 495.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 495.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 493.9
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 492.3
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 490.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 488.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 488.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 488.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 488.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 487.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 486.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 484.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 484.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 483.6
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 482.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 482.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 482.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 482.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 481.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 480.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 480.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 474.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 473.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 473.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 470.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 469.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 469.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 468.6
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 463.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 463.3
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 461.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 460.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 460.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 456.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 454.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 453.4
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 452.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 450.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 450.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 448.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 446.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 443.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 443.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 440.9
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 439.7
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 437.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 437.0
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 436.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 435.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 431.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 431.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 429.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 427.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 427.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 425.1
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 424.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 422.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 422.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 422.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 419.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 418.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 418.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 416.8
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 415.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 414.2
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 411.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 410.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 410.2
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 410.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 408.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 408.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 407.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 406.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 404.2
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 404.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 401.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 400.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 400.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 400.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 399.8
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 396.6
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 396.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 394.6
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 392.2
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 391.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 388.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 387.9
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 385.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 385.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 385.7
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 384.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 384.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 381.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 380.2
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 379.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 379.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 379.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 378.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 376.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 376.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 374.3
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 372.0
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 371.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 371.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 370.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 368.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 367.4
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 366.3
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 365.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 364.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 363.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 363.3
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 363.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 362.2
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 361.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 357.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 357.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 352.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 351.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 345.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 345.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 344.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 344.2
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 343.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 343.0
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 340.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 339.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 338.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 338.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 337.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 337.2
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 333.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 330.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 329.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 328.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 325.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 321.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 321.4
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 319.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 319.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 318.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 315.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 314.6
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 313.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 313.9
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 313.7
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 312.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 312.8
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 305.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 300.9
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 297.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 295.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 293.7
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 293.0
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 292.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 289.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 287.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 283.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 283.5
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 280.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 277.8
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 268.1
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 267.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 266.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 263.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 259.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 252.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 245.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 238.8
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 215.9
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Brain - Putamen (basal ganglia)
Average nTPM: 396.0
Samples: 205

Max nTPM: 949.6
Min nTPM: 215.5
Std nTPM: 110.2
Median nTPM: 371.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 949.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 794.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 736.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 694.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 672.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 667.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 649.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 630.8
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 612.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 612.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 608.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 606.8
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 577.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 571.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 568.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 564.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 561.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 559.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 548.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 543.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 533.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 528.4
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 526.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 521.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 521.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 521.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 520.1
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 518.2
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 517.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 508.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 502.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 501.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 497.2
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 496.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 493.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 490.3
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 479.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 478.7
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 476.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 476.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 473.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 468.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 461.8
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 461.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 454.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 453.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 453.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 451.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 448.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 448.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 447.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 447.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 446.3
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 446.1
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 444.5
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 444.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 439.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 439.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 438.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 437.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 435.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 435.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 433.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 432.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 427.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 427.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 423.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 421.8
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 420.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 420.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 419.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 418.0
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 414.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 412.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 411.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 408.2
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 404.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 402.7
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 402.5
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 397.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 397.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 394.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 394.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 393.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 390.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 389.0
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 386.6
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 386.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 386.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 385.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 384.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 383.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 380.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 380.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 379.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 379.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 379.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 378.5
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 377.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 376.5
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 374.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 372.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 371.0
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 370.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 370.6
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 370.2
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 369.4
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 369.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 369.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 366.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 366.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 366.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 366.2
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 366.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 364.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 362.8
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 360.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 360.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 360.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 358.2
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 357.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 356.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 354.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 353.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 353.6
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 349.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 348.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 348.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 348.0
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 347.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 344.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 343.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 343.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 342.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 342.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 341.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 339.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 339.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 337.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 337.6
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 337.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 334.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 333.5
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 332.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 330.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 328.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 328.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 324.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 323.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 322.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 321.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 320.8
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 320.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 319.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 318.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 318.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 318.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 317.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 317.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 311.5
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 311.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 310.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 309.5
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 308.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 307.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 306.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 306.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 305.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 303.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 301.7
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 300.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 299.4
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 299.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 296.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 294.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 290.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 290.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 288.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 287.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 286.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 285.4
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 283.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 282.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 281.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 280.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 280.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 273.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 271.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 270.1
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 267.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 267.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 264.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 263.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 263.3
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 261.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 260.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 255.6
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 253.1
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 252.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 243.1
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 240.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 239.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 232.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 222.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 215.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

54.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 45.9
FF:10164-103B2 76 years, female 45.9
Nucleus accumbens
Scaled Tags Per Million: 39.0
FF:10037-101F1 23-56 years, mixed 39.0
Putamen
Scaled Tags Per Million: 54.5
FF:10176-103C5 60 years, female 54.5
Globus pallidus
Scaled Tags Per Million: 35.3
FF:10175-103C4 60 years, female 43.1
FF:10161-103A8 76 years, female 27.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

316.2
Pig sample Sample description nTPM
Caudate
nTPM: 243.1
Samples: 4

Max nTPM: 271.1
Min nTPM: 209.3
Sample A Female 250.2
Sample B Female 241.9
Sample C Male 271.1
Sample D Male 209.3
Putamen
nTPM: 297.2
Samples: 4

Max nTPM: 332.4
Min nTPM: 229.0
Sample A Female 332.4
Sample B Female 229.0
Sample C Male 332.3
Sample D Male 295.0
Septum
nTPM: 316.2
Samples: 4

Max nTPM: 352.1
Min nTPM: 277.4
Sample A Female 352.1
Sample B Female 277.4
Sample C Male 331.3
Sample D Male 304.1
Ventral pallidum
nTPM: 292.6
Samples: 4

Max nTPM: 316.3
Min nTPM: 250.4
Sample A Female 250.4
Sample B Female 316.3
Sample C Male 299.5
Sample D Male 304.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

883.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 851.8
Samples: 4

Max nTPM: 924.4
Min nTPM: 804.5
Sample A Male 804.5
Sample B Male 818.6
Sample C Female 859.5
Sample D Female 924.4
Septum
nTPM: 883.5
Samples: 4

Max nTPM: 1036.1
Min nTPM: 770.6
Sample A Male 770.6
Sample B Male 1036.1
Sample C Female 922.7
Sample D Female 804.5
Ventral forebrain
nTPM: 743.2
Samples: 4

Max nTPM: 888.8
Min nTPM: 682.1
Sample A Male 682.1
Sample B Male 718.4
Sample C Female 888.8
Sample D Female 683.4

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 7.9
69873295 Antisense, RP_050510_04_H12, Mouse strain C57BL/6J (56 days, male) 7.9
Pallidum
Expression energy: 7.3
69873295 Antisense, RP_050510_04_H12, Mouse strain C57BL/6J (56 days, male) 7.3

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