Expression of RPS4X in glioma - The Human Protein Atlas

GLIOBLASTOMA MULTIFORME (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

RPS4X is not prognostic in Glioblastoma Multiforme (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 863.71

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

3-year survival highⁱ N/A

3-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

782.4

Number of samples

141

Samples

Sample	Description	pTPM
TCGA-06-2569-01A	24 years, female, black or african american, stage:'--, alive, 13 days	3129.8
TCGA-02-0055-01A	62 years, female, white, stage:'--, dead, 76 days	2018.3
TCGA-14-2554-01A	52 years, female, white, stage:'--, dead, 532 days	1816.4
TCGA-14-0871-01A	74 years, female, white, stage:'--, dead, 880 days	1786.6
TCGA-06-0178-01A	38 years, male, white, stage:'--, dead, 2681 days	1722.4
TCGA-28-2509-01A	77 years, female, white, stage:'--, alive, 145 days	1557.8
TCGA-06-2563-01A	72 years, female, white, stage:'--, alive, 932 days	1541.6
TCGA-28-5218-01A	63 years, male, white, stage:'--, dead, 157 days	1477.0
TCGA-41-5651-01A	59 years, female, black or african american, stage:'--, dead, 460 days	1386.9
TCGA-02-2483-01A	43 years, male, asian, stage:'--, alive, 466 days	1335.9
TCGA-14-1823-01A	58 years, female, white, stage:'--, dead, 543 days	1330.2
TCGA-12-5299-01A	56 years, female, white, stage:'--, dead, 98 days	1319.6
TCGA-14-0817-01A	69 years, female, white, stage:'--, dead, 164 days	1259.8
TCGA-27-2526-01A	79 years, female, white, stage:'--, dead, 87 days	1221.2
TCGA-76-4932-01A	50 years, female, white, stage:'--, dead, 1458 days	1194.2
TCGA-27-1831-01A	66 years, male, white, stage:'--, dead, 505 days	1192.4
TCGA-26-5139-01A	65 years, female, white, stage:'--, alive, 48 days	1177.6
TCGA-06-5417-01A	45 years, female, white, stage:'--, alive, 155 days	1161.1
TCGA-06-5408-01A	54 years, female, white, stage:'--, dead, 357 days	1100.0
TCGA-14-1829-01A	57 years, male, black or african american, stage:'--, alive, 218 days	1100.0
TCGA-02-2485-01A	53 years, male, black or african american, stage:'--, alive, 470 days	1021.2
TCGA-14-1034-01A	60 years, female, stage:'--, dead, 485 days	1017.3
TCGA-32-5222-01A	66 years, male, white, stage:'--, dead, 585 days	1009.0
TCGA-12-3652-01A	60 years, male, white, stage:'--, dead, 1062 days	1008.2
TCGA-12-3650-01A	46 years, male, white, stage:'--, dead, 333 days	1008.0
TCGA-28-5208-01A	52 years, male, white, stage:'--, dead, 544 days	986.8
TCGA-76-4931-01A	70 years, female, white, stage:'--, dead, 279 days	960.5
TCGA-19-2619-01A	55 years, female, black or african american, stage:'--, alive, 294 days	950.7
TCGA-27-2521-01A	34 years, male, white, stage:'--, dead, 510 days	949.3
TCGA-06-5416-01A	23 years, female, white, stage:'--, alive, 204 days	944.5
TCGA-19-4065-01A	36 years, male, white, stage:'--, alive, 214 days	942.4
TCGA-06-5858-01A	45 years, female, white, stage:'--, alive, 187 days	940.6
TCGA-28-2513-01A	69 years, female, white, stage:'--, alive, 222 days	920.6
TCGA-06-0125-01A	63 years, female, white, stage:'--, dead, 1448 days	868.2
TCGA-06-0644-01A	71 years, male, black or african american, stage:'--, dead, 384 days	864.0
TCGA-28-5209-01A	66 years, female, white, stage:'--, alive, 442 days	863.7
TCGA-32-2632-01A	80 years, male, white, stage:'--, dead, 269 days	860.8
TCGA-06-0157-01A	63 years, female, white, stage:'--, dead, 97 days	859.4
TCGA-06-0168-01A	59 years, female, white, stage:'--, dead, 598 days	850.5
TCGA-06-0645-01A	55 years, female, white, stage:'--, dead, 175 days	836.1
TCGA-19-5960-01A	56 years, male, white, stage:'--, dead, 455 days	825.2
TCGA-06-2558-01A	75 years, female, white, stage:'--, dead, 380 days	821.6
TCGA-76-4929-01A	76 years, female, white, stage:'--, dead, 111 days	815.0
TCGA-06-5418-01A	75 years, female, white, stage:'--, dead, 83 days	814.6
TCGA-19-1390-01A	63 years, female, white, stage:'--, dead, 772 days	812.1
TCGA-12-5295-01A	60 years, female, white, stage:'--, dead, 454 days	804.5
TCGA-06-5413-01A	67 years, male, white, stage:'--, alive, 268 days	796.4
TCGA-06-0219-01A	67 years, male, white, stage:'--, dead, 22 days	796.1
TCGA-26-1442-01A	43 years, male, white, stage:'--, alive, 953 days	787.5
TCGA-27-2524-01A	56 years, male, white, stage:'--, dead, 231 days	778.6
TCGA-06-0139-01A	40 years, male, white, stage:'--, dead, 362 days	774.5
TCGA-12-0619-01A	60 years, male, white, stage:'--, dead, 1062 days	771.8
TCGA-32-4213-01A	47 years, female, white, stage:'--, alive, 604 days	771.5
TCGA-06-0138-01A	43 years, male, white, stage:'--, dead, 737 days	764.6
TCGA-28-5207-01A	71 years, male, white, stage:'--, dead, 343 days	756.4
TCGA-41-2571-01A	89 years, male, white, stage:'--, dead, 26 days	750.8
TCGA-06-0210-01A	72 years, female, white, stage:'--, dead, 225 days	747.9
TCGA-32-1982-01A	76 years, female, white, stage:'--, dead, 142 days	746.3
TCGA-06-0745-01A	59 years, male, white, stage:'--, dead, 239 days	744.4
TCGA-06-0184-01A	63 years, male, white, stage:'--, dead, 2126 days	743.3
TCGA-14-0787-01A	69 years, male, asian, stage:'--, dead, 68 days	739.1
TCGA-12-0616-01A	36 years, female, white, stage:'--, dead, 448 days	731.8
TCGA-26-5133-01A	59 years, male, white, stage:'--, alive, 452 days	720.0
TCGA-27-2528-01A	62 years, male, white, stage:'--, dead, 480 days	718.5
TCGA-06-2559-01A	83 years, male, white, stage:'--, dead, 150 days	718.0
TCGA-06-0744-01A	66 years, male, white, stage:'--, dead, 1426 days	709.7
TCGA-32-2616-01A	48 years, female, white, stage:'--, dead, 224 days	705.8
TCGA-06-2570-01A	21 years, female, white, stage:'--, alive, 958 days	702.8
TCGA-06-0190-01A	62 years, male, white, stage:'--, dead, 317 days	701.4
TCGA-06-0749-01A	50 years, male, black or african american, stage:'--, dead, 82 days	696.5
TCGA-27-1832-01A	59 years, female, white, stage:'--, dead, 300 days	691.4
TCGA-06-5410-01A	72 years, female, white, stage:'--, dead, 108 days	690.2
TCGA-06-5412-01A	78 years, female, white, stage:'--, dead, 138 days	687.5
TCGA-19-2629-01A	60 years, male, white, stage:'--, dead, 737 days	685.1
TCGA-12-3653-01A	34 years, female, white, stage:'--, dead, 442 days	684.9
TCGA-06-0130-01A	54 years, male, white, stage:'--, dead, 394 days	677.1
TCGA-06-0238-01A	46 years, male, white, stage:'--, dead, 405 days	675.4
TCGA-26-5134-01A	74 years, male, white, stage:'--, alive, 167 days	671.5
TCGA-06-0158-01A	73 years, male, white, stage:'--, dead, 329 days	670.9
TCGA-19-2625-01A	76 years, female, white, stage:'--, dead, 124 days	665.1
TCGA-06-0174-01A	54 years, male, white, stage:'--, dead, 98 days	661.8
TCGA-28-5216-01A	52 years, male, white, stage:'--, alive, 415 days	657.4
TCGA-06-0686-01A	53 years, male, white, stage:'--, dead, 432 days	647.3
TCGA-06-0878-01A	74 years, male, white, stage:'--, alive, 218 days	647.2
TCGA-14-0789-01A	54 years, male, white, stage:'--, dead, 342 days	644.9
TCGA-76-4927-01A	58 years, male, white, stage:'--, dead, 535 days	638.8
TCGA-28-5215-01A	62 years, female, white, stage:'--, dead, 335 days	635.2
TCGA-06-5856-01A	58 years, male, white, stage:'--, dead, 114 days	634.2
TCGA-19-2620-01A	70 years, male, white, stage:'--, dead, 148 days	632.9
TCGA-06-0211-01A	47 years, male, white, stage:'--, dead, 360 days	626.4
TCGA-06-2565-01A	59 years, male, asian, stage:'--, dead, 506 days	622.8
TCGA-32-1970-01A	59 years, male, white, stage:'--, dead, 468 days	622.5
TCGA-02-2486-01A	64 years, male, white, stage:'--, dead, 618 days	621.6
TCGA-06-2562-01A	81 years, male, white, stage:'--, dead, 382 days	616.3
TCGA-12-0821-01A	62 years, male, white, stage:'--, dead, 323 days	616.0
TCGA-06-2561-01A	53 years, female, white, stage:'--, dead, 537 days	606.4
TCGA-28-2514-01A	45 years, male, asian, stage:'--, alive, 160 days	604.7
TCGA-27-1835-01A	53 years, female, white, stage:'--, dead, 648 days	589.2
TCGA-06-0132-01A	49 years, male, white, stage:'--, dead, 771 days	581.1
TCGA-41-3915-01A	48 years, male, white, stage:'--, dead, 360 days	580.8
TCGA-26-5132-01A	74 years, male, white, stage:'--, alive, 286 days	576.5
TCGA-32-2615-01A	62 years, male, white, stage:'--, dead, 485 days	575.1
TCGA-14-1825-01A	70 years, male, white, stage:'--, dead, 232 days	567.8
TCGA-32-2634-01A	82 years, male, white, stage:'--, alive, 693 days	557.4
TCGA-28-5204-01A	72 years, male, white, stage:'--, dead, 454 days	555.7
TCGA-12-0618-01A	49 years, male, white, stage:'--, dead, 395 days	552.4
TCGA-06-0129-01A	30 years, male, asian, stage:'--, dead, 1024 days	550.1
TCGA-06-0156-01A	57 years, male, white, stage:'--, dead, 178 days	549.8
TCGA-32-2638-01A	67 years, male, white, stage:'--, dead, 766 days	546.8
TCGA-06-0747-01A	53 years, male, white, stage:'--, dead, 82 days	542.4
TCGA-06-5414-01A	61 years, male, white, stage:'--, alive, 273 days	533.8
TCGA-27-2523-01A	63 years, male, white, stage:'--, dead, 489 days	533.7
TCGA-28-5220-01A	67 years, male, white, stage:'--, dead, 388 days	511.3
TCGA-15-1444-01A	21 years, male, white, stage:'--, dead, 1537 days	507.8
TCGA-27-1830-01A	57 years, male, white, stage:'--, dead, 154 days	506.4
TCGA-08-0386-01A	74 years, male, white, stage:'--, dead, 548 days	505.2
TCGA-26-5135-01A	72 years, female, white, stage:'--, dead, 270 days	502.8
TCGA-76-4925-01A	76 years, male, white, stage:'--, dead, 146 days	501.9
TCGA-06-0882-01A	30 years, male, white, stage:'--, dead, 632 days	499.7
TCGA-19-2624-01A	51 years, male, white, stage:'--, dead, 5 days	491.2
TCGA-06-2564-01A	50 years, male, white, stage:'--, alive, 181 days	489.8
TCGA-06-5411-01A	51 years, male, white, stage:'--, dead, 254 days	484.7
TCGA-32-1980-01A	72 years, male, white, stage:'--, dead, 36 days	483.3
TCGA-06-0646-01A	60 years, male, white, stage:'--, dead, 175 days	482.4
TCGA-27-1837-01A	36 years, male, white, stage:'--, dead, 427 days	474.7
TCGA-41-2572-01A	67 years, male, white, stage:'--, dead, 406 days	473.6
TCGA-28-1753-01A	53 years, male, white, stage:'--, alive, 37 days	470.8
TCGA-06-5859-01A	63 years, male, white, stage:'--, alive, 139 days	468.3
TCGA-16-0846-01A	85 years, male, white, stage:'--, dead, 119 days	456.2
TCGA-27-1834-01A	56 years, male, white, stage:'--, dead, 1233 days	454.4
TCGA-41-4097-01A	63 years, female, white, stage:'--, dead, 6 days	453.9
TCGA-15-0742-01A	65 years, male, white, stage:'--, dead, 419 days	451.5
TCGA-06-0750-01A	43 years, male, white, stage:'--, dead, 28 days	444.1
TCGA-06-2557-01A	76 years, male, black or african american, stage:'--, dead, 33 days	440.5
TCGA-06-0141-01A	62 years, male, white, stage:'--, dead, 313 days	424.9
TCGA-06-0187-01A	69 years, male, white, stage:'--, dead, 828 days	422.3
TCGA-06-2567-01A	65 years, male, white, stage:'--, dead, 133 days	400.1
TCGA-02-0047-01A	78 years, male, white, stage:'--, dead, 448 days	382.1
TCGA-27-2519-01A	48 years, male, white, stage:'--, dead, 550 days	359.6
TCGA-06-0743-01A	69 years, male, white, stage:'--, dead, 803 days	352.0
TCGA-06-1804-01A	81 years, female, white, stage:'--, dead, 414 days	238.7
Show allShow less

GLIOBLASTOMA MULTIFORME (VALIDATION) - Interactive survival scatter plotⁱ

& Survival analysisⁱ

RPS4X is not prognostic in Glioblastoma Multiforme (validation)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 1069.12

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

3-year survival highⁱ N/A

3-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

891.3

Number of samples

Samples

Sample	Description	pTPM
AK043	N, NA, stage:NA, alive, 660 days	1877.5
AK066	N, NA, stage:NA, alive, 960 days	1486.4
AK142	N, NA, stage:NA, alive, 90 days	1484.2
AK002	N, NA, stage:NA, dead, 570 days	1467.0
AK133	N, NA, stage:NA, dead, 360 days	1354.5
AK088	N, NA, stage:NA, dead, 360 days	1341.6
AK124	N, NA, stage:NA, alive, 1920 days	1241.4
AK195	N, NA, stage:NA, dead, 390 days	1219.5
AK236	N, NA, stage:NA, dead, 360 days	1195.9
AK139	N, NA, stage:NA, dead, 270 days	1195.5
AK156	N, NA, stage:NA, dead, 330 days	1172.6
AK081	N, NA, stage:NA, dead, 180 days	1152.2
AK227	N, NA, stage:NA, alive, 300 days	1146.7
AK123	N, NA, stage:NA, dead, 180 days	1144.4
AK103	N, NA, stage:NA, alive, 1320 days	1114.9
AK041	N, NA, stage:NA, alive, 810 days	1102.1
AK185	N, NA, stage:NA, alive, 330 days	1071.6
AK055	N, NA, stage:NA, dead, 240 days	1066.7
AK134	N, NA, stage:NA, dead, 360 days	1013.2
AK205	N, NA, stage:NA, dead, 120 days	994.5
AK173	N, NA, stage:NA, dead, 180 days	991.0
AK188	N, NA, stage:NA, alive, 420 days	965.7
AK071	N, NA, stage:NA, dead, 540 days	964.9
AK178	N, NA, stage:NA, dead, 240 days	955.3
AK030	N, NA, stage:NA, dead, 120 days	946.0
AK183	N, NA, stage:NA, alive, 360 days	938.8
AK231	N, NA, stage:NA, dead, 240 days	935.3
AK051	N, NA, stage:NA, dead, 360 days	884.0
AK199	N, NA, stage:NA, alive, 1860 days	874.8
AK079	N, NA, stage:NA, dead, 210 days	843.4
AK165	N, NA, stage:NA, alive, 360 days	814.4
AK049	N, NA, stage:NA, dead, 180 days	808.2
AK035	N, NA, stage:NA, dead, 210 days	763.1
AK213	N, NA, stage:NA, alive, 2010 days	757.9
AK098	N, NA, stage:NA, dead, 660 days	745.1
AK072	N, NA, stage:NA, dead, 150 days	742.4
AK053	N, NA, stage:NA, dead, 300 days	724.8
AK216	N, NA, stage:NA, dead, 360 days	676.3
AK149	N, NA, stage:NA, dead, 420 days	669.6
AK003	N, NA, stage:NA, dead, 600 days	661.6
AK153	N, NA, stage:NA, dead, 240 days	660.3
AK102	N, NA, stage:NA, alive, 1740 days	653.3
AK158	N, NA, stage:NA, dead, 360 days	646.7
AK074	N, NA, stage:NA, alive, 300 days	639.2
AK015	N, NA, stage:NA, alive, 720 days	611.7
AK099	N, NA, stage:NA, dead, 420 days	608.1
AK218	N, NA, stage:NA, dead, 180 days	600.8
AK089	N, NA, stage:NA, dead, 330 days	593.8
AK117	N, NA, stage:NA, dead, 210 days	592.1
AK167	N, NA, stage:NA, dead, 180 days	591.9
AK006	N, NA, stage:NA, dead, 360 days	548.3
AK100	N, NA, stage:NA, alive, 960 days	547.9
AK085	N, NA, stage:NA, alive, 660 days	540.8
AK076	N, NA, stage:NA, alive, 660 days	522.7
AK091	N, NA, stage:NA, dead, 210 days	485.0
AK005	N, NA, stage:NA, dead, 240 days	464.8
AK226	N, NA, stage:NA, dead, 360 days	457.1
AK068	N, NA, stage:NA, alive, 360 days	426.7
Show allShow less

GLIOBLASTOMA MULTIFORME - Protein relative expression (CPTAC)

Number of samples

110

Samples

Sample ID	Sample type	nRPX
CPT0127480003	Tumor	0.6
CPT0168080003	Tumor	0.6
CPT0078580003	Tumor	0.5
CPT0217430008	Tumor	0.4
CPT0205450004	Tumor	0.4
CPT0217000004	Tumor	0.3
CPT0168830003	Tumor	0.3
CPT0224390004	Tumor	0.3
CPT0217710008	Tumor	0.3
CPT0218830004	Tumor	0.3
CPT0093510003	Tumor	0.3
CPT0206000004	Tumor	0.3
CPT0123530003	Tumor	0.3
CPT0206230003	Tumor	0.3
CPT0168590003	Tumor	0.3
CPT0207090003	Tumor	0.3
CPT0161730003	Tumor	0.3
CPT0167640003	Tumor	0.2
CPT0087680003	Tumor	0.2
CPT0228220003	Tumor	0.2
CPT0093360003	Tumor	0.2
CPT0168480003	Tumor	0.2
CPT0190360004	Tumor	0.2
CPT0224540004	Tumor	0.2
CPT0218690004	Tumor	0.2
CPT0205570003	Tumor	0.2
CPT0093590003	Tumor	0.2
CPT0182580003	Tumor	0.2
CPT0167860004	Tumor	0.2
CPT0218330004	Tumor	0.2
CPT0206560003	Tumor	0.2
CPT0093450003	Tumor	0.2
CPT0206670004	Tumor	0.2
CPT0225760003	Tumor	0.2
CPT0127420003	Tumor	0.2
CPT0167970003	Tumor	0.2
CPT0162020003	Tumor	0.2
CPT0168380003	Tumor	0.1
CPT0189750004	Tumor	0.1
CPT0079790003	Tumor	0.1
CPT0087570003	Tumor	0.1
CPT0125220003	Tumor	0.1
CPT0217100003	Tumor	0.1
CPT0167750004	Tumor	0.1
CPT0217060003	Tumor	0.1
CPT0225730003	Tumor	0.1
CPT0171580008	Tumor	0.1
CPT0071100003	Tumor	0.1
CPT0002410011	Tumor	0.1
CPT0205670004	Tumor	0.1
CPT0221180003	Tumor	0.1
CPT0218960004	Tumor	0.1
CPT0217880003	Tumor	0.1
CPT0206780003	Tumor	0.1
CPT0064890003	Tumor	0.1
CPT0206110003	Tumor	0.1
CPT0218890004	Tumor	0.1
CPT0087950003	Tumor	0.0
CPT0104330003	Tumor	0.0
CPT0125570003	Tumor	0.0
CPT0168720003	Tumor	0.0
CPT0217190003	Tumor	0.0
CPT0219080004	Tumor	0.0
CPT0205780003	Tumor	0.0
CPT0162100003	Tumor	0.0
CPT0206880003	Tumor	0.0
CPT0189460003	Tumor	0.0
CPT0162140003	Tumor	-0.1
CPT0189850004	Tumor	-0.1
CPT0216920008	Tumor	-0.1
CPT0201710003	Tumor	-0.1
CPT0189570004	Tumor	-0.1
CPT0175060003	Tumor	-0.1
CPT0224600003	Tumor	-0.1
CPT0209440003	Tumor	-0.1
CPT0168270003	Tumor	-0.1
CPT0125510003	Tumor	-0.1
CPT0208980003	Tumor	-0.1
CPT0218670003	Tumor	-0.1
CPT0199770003	Tumor	-0.1
CPT0093550003	Tumor	-0.1
CPT0186100003	Tumor	-0.1
CPT0182550003	Tumor	-0.2
CPT0087730003	Tumor	-0.2
CPT0182500003	Tumor	-0.2
CPT0092440003	Tumor	-0.2
CPT0207030003	Tumor	-0.2
CPT0089150003	Tumor	-0.2
CPT0218770003	Tumor	-0.2
CPT0167530003	Tumor	-0.2
CPT0206450003	Tumor	-0.2
CPT0189650004	Tumor	-0.2
CPT0224330003	Tumor	-0.2
CPT0205890003	Tumor	-0.3
CPT0064650003	Tumor	-0.3
CPT0189250003	Tumor	-0.3
CPT0206330003	Tumor	-0.3
CPT0196850003	Tumor	-0.4
CPT0190240004	Tumor	-0.4
CPT0204340003	Normal	-0.4
CPT0204380003	Normal	-0.4
CPT0204350003	Normal	-0.5
CPT0204400003	Normal	-0.5
CPT0204370003	Normal	-0.6
CPT0204330003	Normal	-0.6
CPT0204360003	Normal	-0.6
CPT0104220003	Tumor	-0.7
CPT0204390003	Normal	-0.7
CPT0204410003	Normal	-0.8
CPT0204420003	Normal	-0.9
Show allShow less

GLIOMA - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA000857
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Glioma, malignant, High grade
Glioma, malignant, Low grade
Glioma, malignant, NOS