PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:175.4 nTPM
FANTOM5:122.7 Scaled Tags Per Million
Pig:514.3 nTPM
Mouse:551.4 nTPM
Allen mouse:4.0 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 175.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 122.6
2188 Female, age 91, both hemispheres 137.6
2090 Male, age 80, both hemispheres 135.1
1984 Male, age 76, both hemispheres 115.9
2301 Female, age 85, both hemispheres 101.6
Area postrema
nTPM: 125.1
2799 Male, age 61, both hemispheres 147.0
2306 Male, age 80, both hemispheres 119.0
2054 Male, age 76, both hemispheres 109.4
Dorsal cochlear nucleus
nTPM: 123.6
2802 Male, age 74, right hemisphere 161.4
2187 Female, age 91, both hemispheres 138.9
2370 Male, age 61, both hemispheres 117.6
2058 Male, age 76, both hemispheres 104.2
2378 Male, age 80, both hemispheres 95.7
Dorsal medullary reticular nucleus
nTPM: 127.5
2040 Female, age 85, both hemispheres 172.3
2373 Male, age 61, both hemispheres 112.2
2088 Male, age 76, both hemispheres 98.1
Dorsal motor vagal complex
nTPM: 120.3
2844 Male, age 55, unknown 151.4
2133 Female, age 91, both hemispheres 149.7
2000 Male, age 74, unknown 140.5
2643 Male, age 74, both hemispheres 120.0
2813 Female, age 72, unknown 111.3
2797 Male, age 61, both hemispheres 107.2
2185 Male, age 76, both hemispheres 96.7
2807 Female, age 85, both hemispheres 85.9
Dorsal tegmental nucleus
nTPM: 139.9
2326 Male, age 74, both hemispheres 171.7
2083 Male, age 80, both hemispheres 153.1
1936 Male, age 76, left hemisphere 131.0
2358 Male, age 61, both hemispheres 103.9
Dorsolateral tegmental area
nTPM: 151.6
2751 Female, age 85, both hemispheres 170.3
2337 Male, age 61, both hemispheres 162.8
2654 Male, age 80, both hemispheres 151.4
2360 Male, age 74, both hemispheres 146.4
2141 Male, age 76, both hemispheres 127.0
Gigantocellular reticular nuclei, medullary
nTPM: 133.0
1876 Female, age 85, both hemispheres 170.4
2314 Male, age 61, both hemispheres 139.1
2462 Male, age 74, both hemispheres 137.8
2022 Male, age 76, right hemisphere 136.5
2310 Male, age 80, both hemispheres 108.3
2387 Female, age 91, both hemispheres 105.7
Gigantocellular reticular nuclei, pars
nTPM: 108.3
2084 Female, age 85, both hemispheres 147.4
2336 Male, age 61, both hemispheres 112.1
2168 Male, age 76, both hemispheres 109.5
2706 Male, age 80, both hemispheres 91.2
2330 Male, age 80, both hemispheres 81.4
Inferior olive
nTPM: 142.4
2563 Male, age 74, both hemispheres 191.6
2085 Female, age 85, both hemispheres 156.1
2178 Male, age 61, both hemispheres 144.4
2379 Male, age 80, both hemispheres 116.5
2628 Female, age 91, both hemispheres 103.2
Kolliker-Fuse nucleus
nTPM: 140.1
2315 Male, age 76, right hemisphere 164.8
2163 Male, age 80, both hemispheres 155.4
2793 Female, age 91, left hemisphere 100.0
Lateral lemniscal nuclei
nTPM: 110.9
2746 Female, age 85, left hemisphere 122.4
2169 Male, age 76, both hemispheres 120.0
2036 Male, age 80, both hemispheres 116.4
2453 Male, age 74, right hemisphere 109.9
2320 Female, age 91, left hemisphere 86.1
Lateral medullary reticular nucleus
nTPM: 153.9
2305 Male, age 74, both hemispheres 207.5
2852 Male, age 80, both hemispheres 160.5
2044 Male, age 76, both hemispheres 149.4
2190 Female, age 85, both hemispheres 141.7
2804 Female, age 91, both hemispheres 139.3
2374 Male, age 61, both hemispheres 124.8
Lateral parabrachial nucleus
nTPM: 138.2
2139 Female, age 85, right hemisphere 151.4
2013 Male, age 80, both hemispheres 147.0
2792 Male, age 76, both hemispheres 132.0
2790 Male, age 61, both hemispheres 122.6
Lateral vestibular nucleus
nTPM: 133.3
2311 Male, age 80, both hemispheres 135.1
2184 Male, age 76, both hemispheres 131.5
Locus coeruleus
nTPM: 159.5
2123 Female, age 91, both hemispheres 189.4
2014 Male, age 55, unknown 183.8
1980 Male, age 76, both hemispheres 170.4
2317 Female, age 72, unknown 168.8
2788 Male, age 74, unknown 152.2
2720 Male, age 74, both hemispheres 139.9
2162 Male, age 80, both hemispheres 111.7
Medial olivary nucleus
nTPM: 152.0
1943 Male, age 61, both hemispheres 171.6
2138 Female, age 91, both hemispheres 160.5
1962 Male, age 76, both hemispheres 159.6
2851 Male, age 80, both hemispheres 116.2
Medial parabrachial nucleus
nTPM: 140.0
2170 Female, age 91, both hemispheres 181.8
2854 Male, age 80, both hemispheres 145.2
2463 Female, age 85, right hemisphere 128.6
2156 Male, age 61, both hemispheres 122.7
2786 Male, age 76, both hemispheres 121.8
Medial periolivary nuclei
nTPM: 127.0
2791 Male, age 74, right hemisphere 181.0
2063 Male, age 76, both hemispheres 136.9
2171 Female, age 85, both hemispheres 117.2
2081 Male, age 80, both hemispheres 107.7
2458 Female, age 91, both hemispheres 92.3
Medial vestibular nucleus
nTPM: 147.7
2801 Male, age 74, both hemispheres 191.2
2743 Female, age 85, both hemispheres 154.2
2803 Female, age 91, both hemispheres 143.7
2093 Male, age 80, both hemispheres 139.7
2134 Male, age 76, both hemispheres 134.8
2624 Male, age 61, both hemispheres 122.6
Motor facial nucleus
nTPM: 115.4
2365 Male, age 74, right hemisphere 169.4
2062 Male, age 76, both hemispheres 132.5
2126 Male, age 61, both hemispheres 123.8
2795 Female, age 91, both hemispheres 99.6
2697 Female, age 85, both hemispheres 89.5
2327 Male, age 80, both hemispheres 77.8
Motor hypoglossal nucleus
nTPM: 116.2
2125 Female, age 91, both hemispheres 158.2
2132 Female, age 85, both hemispheres 143.2
2182 Male, age 80, both hemispheres 110.1
2277 Male, age 76, both hemispheres 101.5
2461 Male, age 61, both hemispheres 67.9
Motor trigeminal nucleus
nTPM: 119.5
2309 Male, age 76, both hemispheres 129.1
2560 Male, age 74, both hemispheres 127.8
2335 Male, age 61, both hemispheres 124.9
2079 Male, age 80, both hemispheres 113.9
2321 Female, age 91, both hemispheres 102.0
Nuclei of the trapezoid body
nTPM: 120.0
1983 Male, age 76, both hemispheres 151.4
2159 Male, age 61, both hemispheres 135.8
2735 Female, age 85, both hemispheres 119.9
2166 Male, age 80, both hemispheres 108.7
2368 Female, age 91, both hemispheres 84.4
Nucleus ambiguus
nTPM: 122.5
2071 Male, age 76, both hemispheres 150.3
2096 Female, age 85, both hemispheres 94.7
Nucleus cuneatus
nTPM: 116.4
2564 Male, age 74, both hemispheres 180.4
2808 Female, age 85, both hemispheres 128.8
2380 Male, age 80, both hemispheres 120.1
2376 Male, age 61, both hemispheres 118.5
2381 Male, age 80, both hemispheres 110.1
2562 Male, age 61, both hemispheres 107.1
2131 Male, age 76, both hemispheres 103.7
2805 Female, age 91, both hemispheres 91.8
2100 Male, age 76, both hemispheres 87.2
Nucleus gracilis
nTPM: 130.8
2627 Male, age 74, both hemispheres 178.7
2382 Male, age 80, both hemispheres 117.7
2299 Female, age 85, both hemispheres 95.9
Nucleus raphe magnus
nTPM: 122.3
2160 Male, age 61, both hemispheres 167.4
2455 Male, age 74, both hemispheres 143.2
2051 Male, age 76, both hemispheres 123.8
2172 Female, age 85, both hemispheres 110.0
2459 Female, age 91, both hemispheres 95.2
2328 Male, age 80, both hemispheres 94.0
Nucleus raphe obscurus
nTPM: 149.5
2845 Female, age 85, midline 167.5
2800 Male, age 61, midline 157.5
2142 Male, age 76, midline 123.4
Nucleus raphe pallidus
nTPM: 172.2
1924 Male, age 61, midline 263.5
2183 Male, age 80, midline 145.0
2145 Male, age 76, midline 108.0
Nucleus tractus solitarii
nTPM: 120.7
2144 Female, age 91, right hemisphere 160.0
2656 Male, age 76, both hemispheres 125.3
2191 Female, age 85, both hemispheres 112.0
2307 Male, age 80, both hemispheres 85.7
Paramedian reticular nucleus
nTPM: 146.8
2050 Female, age 85, both hemispheres 161.0
2313 Male, age 61, both hemispheres 149.4
2057 Male, age 80, both hemispheres 148.2
2052 Male, age 76, both hemispheres 128.4
Parvicellular reticular nuclei
nTPM: 119.0
2119 Male, age 80, both hemispheres 155.8
2095 Male, age 76, both hemispheres 128.5
2558 Male, age 74, both hemispheres 72.6
Parvicellular reticular nuclei, medullary
nTPM: 134.4
2189 Female, age 91, both hemispheres 156.1
2091 Female, age 85, both hemispheres 141.9
2181 Male, age 80, left hemisphere 105.2
Pedunculopontine tegmental nucleus
nTPM: 153.8
1921 Female, age 85, both hemispheres 155.7
2334 Male, age 80, both hemispheres 155.0
2338 Male, age 61, both hemispheres 150.9
Peritrigeminal nucleus
nTPM: 153.9
2067 Female, age 85, both hemispheres 172.3
2136 Male, age 76, both hemispheres 152.4
2179 Male, age 61, both hemispheres 136.9
Pontine nuclei
nTPM: 149.2
1863 Male, age 55, unknown 184.4
2109 Female, age 72, unknown 169.4
2454 Male, age 74, left hemisphere 168.8
2727 Male, age 61, right hemisphere 166.5
2787 Female, age 85, both hemispheres 143.6
1968 Male, age 76, left hemisphere 128.1
2319 Female, age 91, both hemispheres 121.4
2115 Male, age 80, left hemisphere 111.4
Pontine raphe nucleus
nTPM: 145.7
2853 Male, age 76, midline 152.1
2122 Female, age 85, midline 139.4
Posteroventral cochlear nucleus
nTPM: 138.7
2341 Male, age 80, both hemispheres 152.0
2752 Female, age 85, both hemispheres 144.6
2070 Male, age 76, both hemispheres 135.4
2135 Female, age 91, both hemispheres 134.6
2371 Male, age 61, both hemispheres 126.9
Prepositus hypoglossal nucleus
nTPM: 155.5
2855 Female, age 85, right hemisphere 175.0
2086 Male, age 80, both hemispheres 136.1
Principal sensory trigeminal nucleus
nTPM: 120.1
2158 Male, age 61, both hemispheres 144.8
2324 Male, age 76, both hemispheres 121.9
2008 Male, age 80, left hemisphere 115.3
2367 Female, age 91, left hemisphere 98.5
Reticular pontine nucleus, caudal
nTPM: 112.7
2092 Male, age 76, both hemispheres 144.3
2559 Male, age 74, both hemispheres 136.4
2457 Female, age 91, both hemispheres 88.1
2332 Male, age 80, right hemisphere 82.1
Reticular pontine nucleus, oral
nTPM: 146.5
1939 Male, age 80, both hemispheres 168.9
2361 Male, age 74, both hemispheres 161.7
2012 Female, age 85, both hemispheres 149.5
2167 Male, age 76, both hemispheres 141.2
2366 Female, age 91, both hemispheres 111.2
Reticulotegmental nucleus
nTPM: 120.6
2452 Male, age 74, both hemispheres 130.6
2325 Male, age 76, both hemispheres 128.8
2333 Male, age 80, both hemispheres 112.8
2322 Female, age 91, both hemispheres 110.0
Spinal trigeminal nucleus, caudal
nTPM: 123.2
2390 Female, age 91, both hemispheres 146.6
2642 Male, age 74, both hemispheres 129.7
2312 Male, age 61, both hemispheres 118.8
2308 Male, age 80, both hemispheres 114.5
2447 Male, age 76, both hemispheres 106.4
Spinal trigeminal nucleus, interpolar
nTPM: 143.8
2066 Male, age 76, right hemisphere 168.5
2033 Male, age 80, both hemispheres 151.5
2625 Male, age 61, both hemispheres 146.3
2386 Female, age 85, both hemispheres 133.9
2389 Female, age 91, both hemispheres 118.6
Spinal trigeminal nucleus, oral
nTPM: 131.3
2737 Female, age 85, both hemispheres 147.1
1978 Male, age 76, both hemispheres 133.7
2164 Male, age 80, both hemispheres 113.2
Spinal vestibular nucleus
nTPM: 136.4
2780 Male, age 80, both hemispheres 161.4
2748 Male, age 76, both hemispheres 145.8
2806 Female, age 85, both hemispheres 144.1
2186 Female, age 91, both hemispheres 128.2
2384 Male, age 74, both hemispheres 123.0
2796 Male, age 61, both hemispheres 116.0
Subcoeruleus area
nTPM: 142.2
2369 Female, age 85, left hemisphere 162.4
1958 Male, age 80, both hemispheres 154.9
2451 Male, age 74, both hemispheres 152.3
2323 Female, age 91, left hemisphere 134.8
2089 Male, age 76, left hemisphere 106.4
Superior olive
nTPM: 125.8
2364 Male, age 74, right hemisphere 169.1
1875 Female, age 85, both hemispheres 153.9
2020 Male, age 76, both hemispheres 123.5
2329 Male, age 80, right hemisphere 94.6
2561 Female, age 91, both hemispheres 87.9
Superior vestibular nucleus
nTPM: 175.4
2383 Male, age 74, both hemispheres 235.1
2015 Male, age 80, both hemispheres 150.7
2061 Male, age 76, both hemispheres 140.4
Ventral medullary reticular nucleus
nTPM: 124.1
2372 Male, age 61, both hemispheres 125.6
2060 Male, age 76, both hemispheres 122.5
Ventral periolivary nuclei
nTPM: 112.7
2023 Male, age 76, both hemispheres 145.7
2165 Male, age 80, both hemispheres 120.3
2130 Female, age 85, both hemispheres 97.3
2794 Female, age 91, left hemisphere 87.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 147.0
1986 Male, age 76, both hemispheres 168.8
2741 Female, age 85, both hemispheres 158.7
2180 Male, age 61, both hemispheres 153.4
2118 Male, age 80, both hemispheres 140.1
2302 Female, age 91, both hemispheres 114.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 123.5
2359 Male, age 61, both hemispheres 161.1
1959 Male, age 76, both hemispheres 134.6
2449 Male, age 74, both hemispheres 120.6
2840 Female, age 85, both hemispheres 115.1
2161 Male, age 80, both hemispheres 113.6
2456 Female, age 91, both hemispheres 96.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 122.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 122.7
FF:10182-103D2 60 years, female 126.6
FF:10165-103B3 76 years, female 118.9
Medulla oblongata
Scaled Tags Per Million: 115.7
FF:10174-103C3 60 years, female 172.4
FF:10155-103A2 76 years, female 93.9
FF:10038-101F2 18-64 years, mixed 80.9
Pons
Scaled Tags Per Million: 85.6
FF:10033-101E6 18-54 years, mixed 85.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 514.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 459.7
Samples: 4

Max nTPM: 500.8
Min nTPM: 408.9
Sample A Female 430.1
Sample B Female 408.9
Sample C Male 500.8
Sample D Male 499.0
Pons
nTPM: 514.3
Samples: 4

Max nTPM: 606.0
Min nTPM: 375.2
Sample A Female 540.7
Sample B Female 375.2
Sample C Male 535.2
Sample D Male 606.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 551.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 551.4
Samples: 4

Max nTPM: 578.2
Min nTPM: 512.1
Sample A Male 547.1
Sample B Male 512.1
Sample C Female 578.2
Sample D Female 568.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.0
68744600 Antisense, RP_050208_01_C02, Mouse strain C57BL/6J (56 days, male) 4.0
Pons
Expression energy: 3.8
68744600 Antisense, RP_050208_01_C02, Mouse strain C57BL/6J (56 days, male) 3.8

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