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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:65.5 nTPM
HPA Brain:152.7 nTPM
GTEx:65.5 nTPM
FANTOM5:254.2 Scaled Tags Per Million
Pig:35.3 nTPM
Mouse:81.8 nTPM
Allen mouse:1.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA059303
Glial cells High
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 152.7
2481 Female, age 94, left hemisphere 208.7
1857 Female, age 85, left hemisphere 181.9
1854 Male, age 80, left hemisphere 155.4
2290 Female, age 72, unknown 150.8
2289 Male, age 61, right hemisphere 136.2
2846 Female, age 79, unknown 134.3
2288 Male, age 75, left hemisphere 129.9
1781 Male, age 74, unknown 124.4
Globus pallidus, externus
nTPM: 124.4
1996 Male, age 80, right hemisphere 163.3
2646 Male, age 61, right hemisphere 131.3
2772 Female, age 79, unknown 118.4
2567 Female, age 72, unknown 106.4
2395 Male, age 75, both hemispheres 102.4
Globus pallidus, internus
nTPM: 128.2
2037 Male, age 80, right hemisphere 162.6
1818 Male, age 74, unknown 147.7
2483 Female, age 94, right hemisphere 145.5
2287 Male, age 75, right hemisphere 122.0
2778 Female, age 91, both hemispheres 122.0
2566 Female, age 72, unknown 104.1
2111 Female, age 85, right hemisphere 93.2
Nucleus accumbens
nTPM: 137.8
1806 Female, age 85, left hemisphere 156.3
2286 Male, age 75, left hemisphere 145.7
2391 Female, age 94, left hemisphere 143.8
1856 Female, age 91, right hemisphere 140.5
2824 Male, age 61, right hemisphere 138.1
2698 Female, age 72, unknown 134.4
1783 Male, age 74, unknown 123.2
2732 Male, age 80, right hemisphere 120.4
Nucleus basalis of Meynert
nTPM: 136.9
2393 Male, age 80, right hemisphere 152.1
2484 Female, age 94, left hemisphere 144.9
2569 Male, age 61, both hemispheres 137.5
2821 Male, age 75, both hemispheres 112.9
Nucleus of the diagonal band
nTPM: 126.0
2195 Female, age 85, both hemispheres 128.4
2775 Male, age 80, right hemisphere 128.2
1979 Male, age 74, unknown 127.1
1812 Female, age 91, both hemispheres 126.8
2029 Male, age 61, right hemisphere 119.5
Putamen
nTPM: 132.0
2482 Female, age 94, left hemisphere 163.0
1838 Male, age 80, right hemisphere 148.5
1937 Female, age 91, right hemisphere 134.2
1829 Male, age 74, unknown 125.5
2489 Female, age 72, unknown 120.2
2647 Male, age 75, left hemisphere 117.8
2466 Female, age 79, unknown 115.0
Septal nuclei
nTPM: 123.3
2199 Male, age 80, right hemisphere 149.5
2059 Female, age 85, both hemispheres 133.9
2629 Female, age 94, right hemisphere 125.4
2031 Female, age 72, unknown 121.3
2009 Female, age 91, both hemispheres 120.7
1960 Male, age 74, unknown 110.1
2394 Male, age 61, left hemisphere 102.1
Stria terminalis, bed nucleus
nTPM: 116.4
2486 Female, age 94, both hemispheres 118.4
1974 Female, age 91, both hemispheres 117.2
2201 Male, age 74, unknown 113.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 65.5
Samples: 246

Max nTPM: 119.1
Min nTPM: 27.5
Std nTPM: 16.5
Median nTPM: 62.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 119.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 114.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 111.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 105.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 105.2
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 102.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 102.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 101.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 100.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 100.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 97.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 96.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 95.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 95.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 95.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 95.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 94.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 94.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 93.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 93.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 93.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 93.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 93.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 91.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 90.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 89.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 89.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 88.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 88.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 88.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 87.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 87.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 86.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 86.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 86.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 85.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 84.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 84.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 84.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 84.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 83.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 82.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 82.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 82.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 81.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 81.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 80.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 80.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 80.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 79.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 78.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 77.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 77.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 76.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 76.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 75.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 74.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 73.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 73.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 73.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 73.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 73.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 73.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 72.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 72.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 72.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 72.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 71.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 71.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 71.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 71.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 70.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 70.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 70.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 69.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 69.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 69.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 69.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 68.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 68.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 68.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 68.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 68.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 68.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 68.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 68.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 67.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 67.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 67.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 67.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 67.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 67.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 67.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 67.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 66.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 66.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 66.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 66.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 66.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 66.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 66.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 65.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 65.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 65.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 64.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 64.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 64.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 64.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 64.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 64.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 64.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 64.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 64.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 63.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 63.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 63.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 63.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 63.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 63.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 63.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 62.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 62.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 62.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 62.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 62.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 62.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 62.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 62.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 62.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 62.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 61.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 61.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 61.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 61.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 61.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 61.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 61.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 61.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 61.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 60.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 60.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 60.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 60.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 60.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 59.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 59.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 59.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 59.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 59.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 59.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 59.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 58.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 58.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 58.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 58.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 58.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 58.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 58.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 58.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 58.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 58.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 58.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 57.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 57.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 57.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 57.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 57.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 57.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 57.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 56.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 56.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 56.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 56.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 56.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 56.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 55.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 55.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 55.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 55.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 55.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 55.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 55.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 54.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 54.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 54.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 54.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 54.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 54.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 54.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 54.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 54.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 54.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 53.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 53.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 53.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 53.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 53.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 51.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 51.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 51.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 51.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 51.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 50.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 50.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 50.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 50.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 50.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 49.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 49.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 49.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 49.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 49.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 49.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 49.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 48.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 48.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 48.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 48.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 47.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 47.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 47.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 46.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 45.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 44.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 43.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 43.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 43.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 41.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 40.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 40.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 40.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 40.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 39.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 39.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 39.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 38.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 36.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 36.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 33.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 33.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 29.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 27.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 62.5
Samples: 246

Max nTPM: 100.4
Min nTPM: 24.3
Std nTPM: 13.5
Median nTPM: 62.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 100.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 100.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 94.2
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 90.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 90.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 90.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 89.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 88.7
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 88.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 87.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 86.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 86.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 85.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 84.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 84.1
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 83.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 83.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 83.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 83.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 82.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 81.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 81.0
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 81.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 80.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 80.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 80.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 80.1
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 80.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 79.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 79.2
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 78.6
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 78.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 78.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 78.3
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 77.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 77.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 76.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 76.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 76.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 76.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 76.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 76.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 76.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 75.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 75.5
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 75.4
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 75.0
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 74.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 73.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 73.7
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 73.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 73.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 72.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 72.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 72.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 71.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 71.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 71.3
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 71.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 70.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 70.8
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 70.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 70.5
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 70.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 70.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 70.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 70.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 70.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 70.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 69.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 69.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 69.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 69.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 68.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 68.8
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 68.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 68.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 68.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 68.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 68.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 68.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 68.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 68.0
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 67.3
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 67.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 66.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 66.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 66.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 66.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 66.2
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 66.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 66.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 66.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 65.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 65.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 65.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 65.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 65.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 65.4
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 65.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 65.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 65.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 64.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 64.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 64.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 64.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 64.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 64.0
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 63.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 63.8
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 63.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 63.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 63.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 63.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 63.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 63.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 63.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 63.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 63.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 62.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 62.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 62.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 62.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 62.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 62.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 62.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 62.4
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 62.3
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 62.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 62.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 62.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 61.9
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 61.8
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 61.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 61.4
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 61.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 61.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 61.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 61.0
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 60.8
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 60.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 60.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 59.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 59.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 59.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 59.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 59.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 59.1
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 59.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 58.4
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 58.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 58.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 58.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 57.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 57.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 57.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 57.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 57.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 56.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 56.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 56.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 56.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 56.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 56.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 56.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 56.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 56.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 55.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 55.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 55.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 55.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 55.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 55.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 55.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 55.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 54.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 54.8
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 54.7
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 54.6
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 54.6
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 54.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 54.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 54.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 54.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 53.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 53.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 53.5
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 53.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 53.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 53.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 53.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 53.2
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 53.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 52.8
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 52.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 52.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 51.9
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 51.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 51.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 51.7
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 51.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 51.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 50.9
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 50.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 50.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 49.9
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 49.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 49.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 49.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 49.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 48.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 47.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 46.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 46.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 46.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 46.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 45.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 45.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 45.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 45.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 45.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 45.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 44.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 43.7
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 43.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 42.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 42.2
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 42.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 42.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 42.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 41.8
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 41.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 41.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 40.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 40.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 39.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 39.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 39.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 37.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 35.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 35.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 34.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 33.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 32.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 29.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 24.3
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Brain - Putamen (basal ganglia)
Average nTPM: 62.1
Samples: 205

Max nTPM: 141.8
Min nTPM: 27.5
Std nTPM: 16.8
Median nTPM: 58.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 141.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 117.7
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 109.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 106.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 105.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 101.1
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 100.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 99.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 94.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 92.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 91.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 91.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 88.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 88.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 87.7
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 87.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 86.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 85.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 85.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 84.4
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 84.2
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 83.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 83.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 82.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 81.8
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 81.3
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 81.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 81.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 81.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 81.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 80.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 80.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 79.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 79.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 79.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 79.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 78.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 77.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 77.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 77.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 76.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 76.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 75.5
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 75.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 73.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 72.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 72.0
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 71.0
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 70.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 70.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 69.2
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 68.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 68.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 68.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 68.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 68.6
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 68.4
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 68.2
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 67.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 67.8
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 67.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 67.6
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 67.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 67.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 67.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 67.1
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 66.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 66.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 65.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 65.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 65.2
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 65.2
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 65.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 65.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 64.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 64.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 64.4
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 64.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 63.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 63.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 63.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 62.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 62.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 61.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 61.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 61.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 61.6
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 61.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 61.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 60.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 60.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 60.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 60.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 60.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 60.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 59.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 59.7
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 59.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 59.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 59.3
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 59.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 58.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 58.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 58.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 58.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 58.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 58.0
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 58.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 57.9
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 57.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 57.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 57.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 57.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 57.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 57.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 56.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 56.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 56.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 56.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 56.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 56.4
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 56.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 56.3
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 56.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 56.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 56.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 55.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 55.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 55.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 54.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 54.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 54.4
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 54.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 54.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 54.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 54.0
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 54.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 54.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 53.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 53.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 53.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 53.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 53.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 53.0
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 52.9
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 52.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 52.7
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 52.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 52.4
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 52.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 52.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 52.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 52.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 51.9
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 51.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 51.3
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 51.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 50.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 50.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 50.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 49.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 49.3
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 49.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 48.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 48.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 48.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 48.6
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 48.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 48.5
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 48.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 47.5
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 47.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 45.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 45.5
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 45.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 45.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 45.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 44.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 44.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 44.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 44.3
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 44.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 43.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 43.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 43.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 42.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 42.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 42.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 42.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 42.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 42.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 41.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 41.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 40.9
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 40.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 40.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 39.7
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 39.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 37.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 36.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 35.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 35.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 30.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 29.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 27.5
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

254.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 235.9
FF:10164-103B2 76 years, female 235.9
Nucleus accumbens
Scaled Tags Per Million: 153.0
FF:10037-101F1 23-56 years, mixed 153.0
Putamen
Scaled Tags Per Million: 254.2
FF:10176-103C5 60 years, female 254.2
Globus pallidus
Scaled Tags Per Million: 174.4
FF:10175-103C4 60 years, female 193.0
FF:10161-103A8 76 years, female 155.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

35.3
Pig sample Sample description nTPM
Caudate
nTPM: 30.1
Samples: 4

Max nTPM: 32.7
Min nTPM: 28.2
Sample A Female 28.2
Sample B Female 28.2
Sample C Male 32.7
Sample D Male 31.3
Putamen
nTPM: 28.1
Samples: 4

Max nTPM: 33.1
Min nTPM: 23.9
Sample A Female 23.9
Sample B Female 30.0
Sample C Male 33.1
Sample D Male 25.2
Septum
nTPM: 35.3
Samples: 4

Max nTPM: 43.1
Min nTPM: 31.1
Sample A Female 32.5
Sample B Female 34.3
Sample C Male 43.1
Sample D Male 31.1
Ventral pallidum
nTPM: 29.8
Samples: 4

Max nTPM: 32.6
Min nTPM: 25.0
Sample A Female 31.3
Sample B Female 30.4
Sample C Male 32.6
Sample D Male 25.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.8
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 57.6
Samples: 4

Max nTPM: 69.7
Min nTPM: 47.2
Sample A Male 51.6
Sample B Male 47.2
Sample C Female 69.7
Sample D Female 62.0
Septum
nTPM: 66.1
Samples: 4

Max nTPM: 69.6
Min nTPM: 60.3
Sample A Male 66.0
Sample B Male 68.5
Sample C Female 69.6
Sample D Female 60.3
Ventral forebrain
nTPM: 81.8
Samples: 4

Max nTPM: 89.5
Min nTPM: 76.6
Sample A Male 79.2
Sample B Male 76.6
Sample C Female 82.0
Sample D Female 89.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.2
69169433 Antisense, RP_050321_03_E10, Mouse strain C57BL/6J (56 days, male) 1.2
Pallidum
Expression energy: 1.1
69169433 Antisense, RP_050321_03_E10, Mouse strain C57BL/6J (56 days, male) 1.1

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