Expression of MT-CO2 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

MT-CO2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 12553.7

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

18380.3

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	66497.9
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	58585.9
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	52732.6
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	47435.3
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	47402.1
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	45924.3
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	45079.2
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	44648.5
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	43393.4
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	40588.9
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	40518.4
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	39995.7
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	39515.0
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	36525.2
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	36300.0
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	35994.5
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	35809.0
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	34340.9
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	34162.0
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	33992.2
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	33720.4
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	33387.8
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	33244.0
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	33121.0
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	33113.9
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	32903.6
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	32455.8
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	32409.6
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	32034.3
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	31497.0
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	31303.4
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	31291.5
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	31148.3
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	31107.8
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	30832.0
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	30561.6
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	30430.6
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	30378.9
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	30237.3
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	30039.1
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	29670.9
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	29567.9
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	29527.2
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	29273.7
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	28713.4
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	28691.5
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	28080.7
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	27990.0
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	27930.8
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	27826.6
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	27604.7
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	27600.3
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	27519.9
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	27515.9
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	27372.2
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	27355.8
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	27315.8
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	26958.9
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	26918.7
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	26879.9
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	26742.1
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	26641.4
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	26551.7
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	26446.6
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	26414.8
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	26239.3
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	26065.8
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	25936.0
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	25887.9
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	25608.7
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	25379.6
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	25306.6
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	25152.1
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	25082.6
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	24600.7
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	24561.7
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	24540.2
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	24448.6
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	24242.9
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	24172.3
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	24094.7
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	24055.0
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	24027.0
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	23912.9
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	23819.5
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	23806.2
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	23731.3
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	23650.0
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	23615.1
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	23588.3
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	23523.9
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	23240.5
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	23111.2
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	22952.9
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	22506.5
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	22504.2
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	22477.8
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	22365.4
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	22343.3
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	21911.8
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	21822.1
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	21474.1
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	21356.2
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	21285.7
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	21241.6
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	21241.6
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	21179.8
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	21161.9
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	21083.0
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	21082.3
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	21047.1
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	20915.8
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	20810.7
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	20665.9
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	20643.6
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	20641.1
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	20620.1
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	20544.8
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	20461.6
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	20448.7
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	20164.5
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	20135.1
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	20110.4
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	20066.7
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	20037.3
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	19994.7
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	19962.4
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	19954.4
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	19953.5
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	19932.9
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	19776.5
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	19552.0
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	19546.1
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	19491.5
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	19488.4
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	19221.9
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	19115.7
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	19089.2
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	19066.1
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	19052.1
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	18906.5
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	18854.3
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	18712.6
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	18684.3
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	18663.2
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	18614.4
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	18497.9
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	18484.2
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	18287.4
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	18108.7
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	17987.9
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	17962.4
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	17884.4
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	17843.0
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	17835.1
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	17740.4
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	17710.8
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	17687.5
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	17667.1
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	17431.7
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	17409.5
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	17389.9
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	17305.6
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	17302.6
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	17223.6
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	17192.1
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	17158.3
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	17107.6
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	16992.8
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	16964.0
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	16893.1
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	16688.6
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	16661.5
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	16511.3
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	16443.2
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	16186.0
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	16152.0
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	16128.9
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	16046.7
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	16041.1
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	16031.8
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	15928.5
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	15900.2
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	15804.3
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	15801.3
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	15761.0
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	15688.9
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	15685.3
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	15577.5
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	15527.2
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	15503.5
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	15451.2
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	15435.4
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	15371.4
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	15335.2
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	15221.6
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	15219.6
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	15061.4
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	15054.5
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	14985.9
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	14942.5
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	14939.9
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	14783.1
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	14729.6
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	14711.6
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	14701.3
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	14562.3
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	14511.0
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	14478.1
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	14465.9
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	14436.9
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	14418.8
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	14414.6
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	14394.5
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	14373.5
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	14355.5
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	14336.3
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	14334.2
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	14312.7
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	14295.4
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	14277.7
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	14252.8
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	14158.7
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	14047.5
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	14027.8
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	14015.4
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	13908.6
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	13906.0
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	13903.9
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	13889.1
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	13876.2
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	13859.8
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	13849.1
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	13832.3
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	13777.5
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	13753.0
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	13743.5
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	13650.3
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	13648.2
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	13557.8
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	13552.8
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	13547.3
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	13490.7
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	13415.3
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	13377.8
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	13272.4
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	13252.3
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	13114.0
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	13049.1
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	12879.5
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	12861.2
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	12816.2
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	12770.4
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	12747.2
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	12703.5
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	12632.2
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	12630.7
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	12593.6
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	12584.8
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	12554.5
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	12553.7
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	12553.0
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	12521.4
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	12514.9
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	12514.0
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	12502.1
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	12412.5
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	12359.2
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	12261.8
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	11961.7
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	11949.0
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	11875.5
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	11819.5
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	11698.6
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	11551.6
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	11542.7
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	11471.5
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	11462.6
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	11460.6
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	11456.9
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	11421.5
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	11288.7
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	11252.9
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	11245.4
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	11244.8
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	11231.5
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	11109.4
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	11072.3
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	11062.4
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	10930.4
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	10824.1
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	10775.4
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	10714.3
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	10615.5
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	10589.6
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	10489.3
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	10485.3
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	10417.5
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	10372.7
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	10232.4
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	10192.9
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	10188.8
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	10135.0
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	10030.8
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	10027.4
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	10023.5
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	9983.0
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	9976.4
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	9946.6
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	9942.8
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	9937.0
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	9869.2
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	9735.7
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	9645.0
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	9642.3
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	9577.2
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	9554.6
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	9449.0
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	9432.0
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	9424.6
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	9369.4
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	9308.6
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	9152.2
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	9137.1
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	9002.8
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	8960.5
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	8958.0
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	8898.8
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	8880.4
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	8866.4
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	8818.1
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	8734.4
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	8729.5
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	8700.5
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	8652.7
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	8536.2
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	8498.3
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	8381.2
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	8359.1
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	7833.0
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	7750.5
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	7725.3
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	7601.4
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	7563.9
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	7500.7
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	7490.8
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	7461.9
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	7433.5
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	7136.9
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	6697.0
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	6683.2
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	6647.5
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	6629.2
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	6496.7
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	5995.0
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	5966.2
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	5877.7
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	5725.1
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	5017.6
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	4494.3
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	4301.8
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	3503.5
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
471	Tumor	N/A
351	Tumor	N/A
472	Normal	N/A
231	Tumor	N/A
352	Normal	N/A
473	Tumor	N/A
111	Normal	N/A
232	Normal	N/A
353	Tumor	N/A
474	Normal	N/A
112	Tumor	N/A
354	Normal	N/A
113	Tumor	N/A
355	Tumor	N/A
114	Normal	N/A
356	Normal	N/A
477	Tumor	N/A
357	Tumor	N/A
478	Normal	N/A
358	Normal	N/A
911	Tumor	N/A
912	Normal	N/A
913	Tumor	N/A
914	Normal	N/A
915	Tumor	N/A
916	Normal	N/A
917	Tumor	N/A
918	Normal	N/A
481	Tumor	N/A
361	Tumor	N/A
482	Normal	N/A
362	Normal	N/A
483	Tumor	N/A
363	Tumor	N/A
484	Normal	N/A
364	Normal	N/A
123	Tumor	N/A
365	Tumor	N/A
124	Normal	N/A
366	Normal	N/A
487	Tumor	N/A
125	Tumor	N/A
367	Tumor	N/A
488	Normal	N/A
126	Normal	N/A
368	Normal	N/A
127	Tumor	N/A
128	Normal	N/A
921	Tumor	N/A
922	Normal	N/A
923	Tumor	N/A
924	Normal	N/A
925	Tumor	N/A
926	Normal	N/A
491	Tumor	N/A
492	Normal	N/A
493	Tumor	N/A
131	Tumor	N/A
494	Normal	N/A
132	Normal	N/A
375	Tumor	N/A
376	Normal	N/A
497	Tumor	N/A
135	Tumor	N/A
498	Normal	N/A
136	Normal	N/A
257	Tumor	N/A
137	Tumor	N/A
258	Normal	N/A
138	Normal	N/A
813	Tumor	N/A
814	Normal	N/A
815	Tumor	N/A
816	Normal	N/A
937	Tumor	N/A
817	Tumor	N/A
938	Normal	N/A
818	Normal	N/A
261	Tumor	N/A
141	Tumor	N/A
262	Normal	N/A
383	Tumor	N/A
142	Normal	N/A
384	Normal	N/A
385	Tumor	N/A
386	Normal	N/A
145	Tumor	N/A
387	Tumor	N/A
146	Normal	N/A
267	Tumor	N/A
388	Normal	N/A
147	Tumor	N/A
268	Normal	N/A
148	Normal	N/A
943	Tumor	N/A
823	Tumor	N/A
944	Normal	N/A
824	Normal	N/A
1022	Normal	N/A
1021	Tumor	N/A
391	Tumor	N/A
271	Tumor	N/A
392	Normal	N/A
272	Normal	N/A
393	Tumor	N/A
394	Normal	N/A
395	Tumor	N/A
396	Normal	N/A
277	Tumor	N/A
1016	Normal	N/A
278	Normal	N/A
1015	Tumor	N/A
1014	Normal	N/A
951	Tumor	N/A
1013	Tumor	N/A
952	Normal	N/A
953	Tumor	N/A
954	Normal	N/A
713	Tumor	N/A
955	Tumor	N/A
714	Normal	N/A
956	Normal	N/A
715	Tumor	N/A
957	Tumor	N/A
716	Normal	N/A
958	Normal	N/A
1032	Normal	N/A
1031	Tumor	N/A
161	Tumor	N/A
162	Normal	N/A
283	Tumor	N/A
284	Normal	N/A
285	Tumor	N/A
286	Normal	N/A
1028	Normal	N/A
1027	Tumor	N/A
1026	Normal	N/A
1025	Tumor	N/A
721	Tumor	N/A
963	Tumor	N/A
722	Normal	N/A
964	Normal	N/A
723	Tumor	N/A
965	Tumor	N/A
724	Normal	N/A
966	Normal	N/A
967	Tumor	N/A
968	Normal	N/A
727	Tumor	N/A
728	Normal	N/A
1044	Normal	N/A
1043	Tumor	N/A
1042	Normal	N/A
1041	Tumor	N/A
171	Tumor	N/A
172	Normal	N/A
297	Tumor	N/A
298	Normal	N/A
851	Tumor	N/A
852	Normal	N/A
975	Tumor	N/A
976	Normal	N/A
977	Tumor	N/A
615	Tumor	N/A
857	Tumor	N/A
978	Normal	N/A
616	Normal	N/A
737	Tumor	N/A
858	Normal	N/A
617	Tumor	N/A
738	Normal	N/A
618	Normal	N/A
185	Tumor	N/A
186	Normal	N/A
187	Tumor	N/A
188	Normal	N/A
981	Tumor	N/A
861	Tumor	N/A
982	Normal	N/A
741	Tumor	N/A
862	Normal	N/A
983	Tumor	N/A
742	Normal	N/A
863	Tumor	N/A
984	Normal	N/A
1046	Normal	N/A
743	Tumor	N/A
864	Normal	N/A
1045	Tumor	N/A
744	Normal	N/A
865	Tumor	N/A
745	Tumor	N/A
866	Normal	N/A
746	Normal	N/A
867	Tumor	N/A
868	Normal	N/A
627	Tumor	N/A
628	Normal	N/A
191	Tumor	N/A
192	Normal	N/A
195	Tumor	N/A
196	Normal	N/A
873	Tumor	N/A
874	Normal	N/A
513	Tumor	N/A
755	Tumor	N/A
514	Normal	N/A
635	Tumor	N/A
756	Normal	N/A
877	Tumor	N/A
515	Tumor	N/A
636	Normal	N/A
878	Normal	N/A
516	Normal	N/A
517	Tumor	N/A
518	Normal	N/A
881	Tumor	N/A
882	Normal	N/A
641	Tumor	N/A
883	Tumor	N/A
642	Normal	N/A
884	Normal	N/A
523	Tumor	N/A
524	Normal	N/A
525	Tumor	N/A
526	Normal	N/A
647	Tumor	N/A
527	Tumor	N/A
648	Normal	N/A
528	Normal	N/A
411	Tumor	N/A
412	Normal	N/A
533	Tumor	N/A
413	Tumor	N/A
534	Normal	N/A
414	Normal	N/A
535	Tumor	N/A
777	Tumor	N/A
415	Tumor	N/A
536	Normal	N/A
778	Normal	N/A
416	Normal	N/A
537	Tumor	N/A
538	Normal	N/A
661	Tumor	N/A
662	Normal	N/A
421	Tumor	N/A
663	Tumor	N/A
422	Normal	N/A
664	Normal	N/A
785	Tumor	N/A
423	Tumor	N/A
665	Tumor	N/A
786	Normal	N/A
424	Normal	N/A
545	Tumor	N/A
666	Normal	N/A
425	Tumor	N/A
546	Normal	N/A
426	Normal	N/A
427	Tumor	N/A
428	Normal	N/A
671	Tumor	N/A
672	Normal	N/A
431	Tumor	N/A
311	Tumor	N/A
432	Normal	N/A
553	Tumor	N/A
312	Normal	N/A
433	Tumor	N/A
554	Normal	N/A
313	Tumor	N/A
434	Normal	N/A
314	Normal	N/A
435	Tumor	N/A
436	Normal	N/A
557	Tumor	N/A
558	Normal	N/A
563	Tumor	N/A
443	Tumor	N/A
564	Normal	N/A
685	Tumor	N/A
444	Normal	N/A
686	Normal	N/A
445	Tumor	N/A
446	Normal	N/A
567	Tumor	N/A
447	Tumor	N/A
568	Normal	N/A
327	Tumor	N/A
448	Normal	N/A
328	Normal	N/A
571	Tumor	N/A
451	Tumor	N/A
572	Normal	N/A
331	Tumor	N/A
452	Normal	N/A
573	Tumor	N/A
211	Tumor	N/A
332	Normal	N/A
574	Normal	N/A
695	Tumor	N/A
212	Normal	N/A
696	Normal	N/A
213	Tumor	N/A
455	Tumor	N/A
697	Tumor	N/A
214	Normal	N/A
456	Normal	N/A
698	Normal	N/A
217	Tumor	N/A
218	Normal	N/A
461	Tumor	N/A
341	Tumor	N/A
462	Normal	N/A
221	Tumor	N/A
342	Normal	N/A
463	Tumor	N/A
222	Normal	N/A
343	Tumor	N/A
464	Normal	N/A
223	Tumor	N/A
344	Normal	N/A
465	Tumor	N/A
224	Normal	N/A
466	Normal	N/A
467	Tumor	N/A
468	Normal	N/A
227	Tumor	N/A
228	Normal	N/A
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA051505	Antibody HPA054758	Antibody CAB016243
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS