We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MT-CO2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • MT-CO2
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
AND
VALIDATION
Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-CO2 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 6267.03
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 11569.0
Number of samples 497
Samples
Sample Description pTPM
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 46543.3
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 44148.2
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 42687.2
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 42508.1
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 39690.0
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 39654.9
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 37779.2
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 35993.0
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 34618.9
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 31526.4
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 30900.3
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 30480.2
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 30477.7
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 30090.4
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 29269.5
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 28990.3
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 28799.1
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 27957.3
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 27928.5
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 27674.6
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 27638.8
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 27398.6
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 26976.8
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 26363.2
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 26035.1
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 25910.0
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 25851.2
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 25721.9
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 25413.9
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 25387.6
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 24898.3
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 24649.6
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 24636.8
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 24327.9
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 24268.6
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 24036.5
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 23863.1
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 23589.7
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 23399.6
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 23394.2
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 22729.7
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 22636.9
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 22369.5
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 21938.3
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 21904.9
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 21798.2
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 21748.2
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 21696.4
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 21691.0
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 21638.2
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 21461.5
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 20775.9
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 20710.0
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 20556.1
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 20497.2
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 20396.2
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 20287.4
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 20016.9
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 19983.4
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 19741.7
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 19723.0
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 19690.6
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 19675.4
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 19600.8
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 19550.6
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 19381.0
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 19329.3
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 18847.4
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 18767.2
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 18760.1
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 18637.2
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 18535.1
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 18416.3
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 18287.8
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 18213.0
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 18194.0
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 18147.8
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 18131.7
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 17984.5
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 17863.1
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 17848.4
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 17821.3
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 17703.9
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 17635.6
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 17628.2
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 17493.6
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 17324.1
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 17285.7
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 17266.0
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 17114.7
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 17005.7
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 16984.8
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 16927.2
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 16886.0
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 16876.4
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 16772.9
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 16751.7
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 16743.5
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 16715.5
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 16660.3
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 16478.7
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 16396.9
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 16396.9
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 16387.7
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 16314.7
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 16206.0
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 16103.1
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 16033.5
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 16015.2
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 15984.6
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 15921.6
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 15920.0
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 15915.5
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 15863.0
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 15821.1
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 15720.1
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 15665.6
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 15647.1
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 15596.4
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 15512.4
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 15483.3
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 15458.1
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 15438.7
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 15416.3
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 15234.6
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 15199.1
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 15130.5
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 15038.5
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 15036.2
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 15011.6
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 14971.5
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 14928.3
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 14884.8
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 14840.0
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 14806.2
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 14783.5
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 14748.6
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 14738.7
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 14713.7
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 14697.0
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 14668.6
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 14622.6
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 14554.3
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 14551.7
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 14436.0
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 14404.3
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 14382.2
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 14294.7
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 14192.4
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 14039.6
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 14034.4
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 14007.8
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 13972.5
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 13903.8
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 13882.5
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 13870.2
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 13832.8
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 13758.6
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 13743.3
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 13542.3
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 13515.0
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 13486.2
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 13428.7
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 13387.3
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 13301.7
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 13225.0
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 13171.4
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 13161.4
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 12824.1
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 12781.2
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 12575.5
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 12470.0
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 12447.6
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 12406.8
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 12356.5
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 12333.6
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 12331.1
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 12318.1
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 12285.0
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 12149.3
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 12146.8
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 12128.2
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 12115.1
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 11977.0
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 11942.7
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 11732.2
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 11634.7
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 11606.5
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 11593.0
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 11509.4
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 11433.0
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 11368.6
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 11325.8
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 11318.8
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 11316.5
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 11315.9
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 11294.5
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 11272.1
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 11237.5
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 11214.3
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 11198.3
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 11190.5
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 11107.4
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 11098.7
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 11098.0
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 11018.9
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 10993.7
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 10976.5
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 10959.3
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 10853.4
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 10831.4
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 10785.1
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 10772.4
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 10766.6
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 10747.5
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 10666.1
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 10600.1
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 10584.9
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 10553.7
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 10533.8
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 10459.5
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 10445.6
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 10426.0
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 10337.8
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 10279.1
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 10210.6
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 10208.7
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 10083.9
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 10047.6
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 10026.5
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 10023.6
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 10020.0
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 10018.3
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 9934.2
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 9928.5
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 9909.0
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 9900.8
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 9897.5
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 9852.9
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 9841.6
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 9840.0
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 9821.3
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 9797.5
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 9790.0
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 9788.3
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 9766.4
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 9563.1
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 9554.7
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 9553.3
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 9525.4
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 9519.7
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 9511.2
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 9487.5
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 9486.0
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 9463.9
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 9401.8
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 9381.2
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 9370.1
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 9296.6
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 9295.6
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 9231.2
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 9214.5
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 9212.8
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 9198.2
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 9155.4
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 9049.4
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 8921.0
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 8918.9
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 8910.8
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 8874.2
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 8868.1
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 8853.8
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 8839.6
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 8832.0
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 8806.2
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 8787.2
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 8756.6
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 8697.5
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 8629.2
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 8560.0
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 8555.1
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 8549.7
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 8504.9
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 8501.9
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 8499.1
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 8495.4
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 8481.0
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 8460.6
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 8448.4
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 8442.4
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 8429.4
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 8411.3
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 8404.0
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 8383.8
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 8348.8
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 8339.3
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 8317.6
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 8272.7
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 8209.8
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 8175.7
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 8122.5
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 8094.9
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 8052.7
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 8013.3
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 8007.0
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 7966.0
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 7914.4
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 7893.5
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 7867.1
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 7856.7
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 7849.5
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 7838.0
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 7815.3
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 7691.9
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 7650.3
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 7639.0
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 7628.2
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 7594.1
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 7567.8
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 7547.9
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 7538.8
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 7521.7
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 7480.0
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 7446.5
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 7440.7
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 7402.0
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 7394.9
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 7365.2
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 7359.4
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 7356.5
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 7350.6
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 7332.9
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 7293.6
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 7282.5
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 7277.0
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 7243.6
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 7215.0
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 7206.7
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 7204.0
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 7177.2
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 7173.0
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 7171.8
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 7166.4
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 7122.6
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 7122.3
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 7071.0
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 7028.6
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 7014.8
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 6972.2
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 6968.6
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 6924.3
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 6909.8
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 6903.1
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 6902.4
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 6901.4
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 6867.2
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 6843.5
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 6818.0
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 6745.6
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 6734.8
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 6729.8
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 6689.2
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 6666.3
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 6609.6
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 6578.0
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 6555.0
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 6554.5
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 6552.2
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 6490.8
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 6477.8
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 6465.9
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 6456.3
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 6454.2
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 6370.9
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 6363.4
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 6360.1
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 6303.7
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 6276.0
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 6271.6
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 6262.4
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 6254.7
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 6228.7
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 6210.9
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 6182.8
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 6159.9
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 6135.4
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 6118.5
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 6089.4
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 6073.4
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 6066.2
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 6032.7
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 6011.5
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 6001.6
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 5998.0
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 5991.3
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 5979.5
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 5962.2
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 5959.2
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 5949.9
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 5948.4
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 5904.1
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 5873.5
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 5847.8
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 5773.1
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 5650.8
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 5624.6
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 5597.1
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 5576.6
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 5568.3
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 5550.2
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 5483.1
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 5473.1
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 5471.2
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 5446.0
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 5405.9
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 5392.3
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 5346.2
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 5295.2
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 5249.9
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 5245.9
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 5208.3
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 5160.2
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 5143.2
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 5080.4
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 4971.6
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 4952.9
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 4946.3
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 4918.1
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 4911.3
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 4903.6
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 4882.7
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 4859.2
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 4848.4
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 4831.6
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 4830.3
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 4802.7
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 4758.8
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 4756.5
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 4737.9
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 4730.3
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 4714.0
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 4688.9
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 4654.9
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 4554.9
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 4525.8
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 4516.2
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 4444.8
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 4382.8
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 4365.2
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 4273.3
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 4262.3
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 4154.9
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 4119.6
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 4022.2
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 4003.2
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 3996.3
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 3990.4
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 3981.6
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 3965.6
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 3962.8
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 3915.7
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 3912.5
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 3811.7
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 3727.5
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 3633.8
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 3333.5
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 3301.9
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 3183.5
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 3066.3
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 2854.4
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 2807.2
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 2740.7
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 2620.7
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 2437.3
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 2429.5
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 2345.4
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 2333.3
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 2229.2
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 2118.2
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 2007.8
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 1732.1
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 1687.5
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 1647.3
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 1537.6
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 1447.5
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 1438.1
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 1312.5
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 1237.9
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 1220.8
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 1198.3
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 1109.6
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 1074.4
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 847.5
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 823.4
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 804.0
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 513.4
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 278.3
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-CO2 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 15741.8
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 15284.0
Number of samples 105
Samples
Sample Description pTPM
L728 77 years, male, stage:Stage IIB, dead, 1128 days 39087.6
L778 65 years, female, stage:Stage IA, alive, 1600 days 34034.8
L493 56 years, female, stage:Stage IIB, alive, 2945 days 32774.4
L850 77 years, male, stage:Stage IIIA, dead, 997 days 29724.4
L541 70 years, female, stage:Stage IIIA, dead, 915 days 29427.6
L695 68 years, female, stage:Stage IB, dead, 1762 days 29276.1
L596 74 years, female, stage:Stage IA, alive, 2319 days 27094.6
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 26170.7
L782 73 years, female, stage:Stage IIB, alive, 3371 days 26093.7
L749 49 years, female, stage:Stage IIIA, dead, 189 days 25646.0
L532 69 years, female, stage:Stage IA, dead, 301 days 25063.4
L872 71 years, female, stage:Stage IA, alive, 1793 days 23767.6
L504 65 years, female, stage:Stage IA, dead, 1295 days 23084.9
L566 58 years, male, stage:Stage IB, alive, 2489 days 22689.6
L638 65 years, male, stage:Stage IA, alive, 2076 days 22156.4
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 21914.2
L710 72 years, female, stage:Stage IIA, alive, 1775 days 21755.0
L879 75 years, male, stage:Stage IV, dead, 873 days 21566.7
L890 56 years, female, stage:Stage IIB, dead, 1264 days 21444.3
L826 45 years, female, stage:Stage IV, dead, 935 days 20857.8
L656 58 years, male, stage:Stage IA, alive, 2227 days 20732.1
L630 65 years, female, stage:Stage IA, dead, 1733 days 20078.8
L439 80 years, male, stage:Stage IIB, dead, 2773 days 19938.4
L613 72 years, male, stage:Stage IIIA, dead, 19 days 19689.2
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 19355.7
L871 74 years, male, stage:Stage IB, dead, 873 days 19182.3
L455 52 years, female, stage:Stage IA, alive, 3315 days 19132.5
L531 74 years, male, stage:Stage IB, dead, 928 days 18837.5
L561 62 years, female, stage:Stage IA, alive, 2543 days 18737.3
L865 75 years, female, stage:Stage IIB, alive, 1927 days 18502.0
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 17937.7
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 17882.0
L678 65 years, female, stage:Stage IB, dead, 1114 days 17624.6
L738 74 years, female, stage:Stage IB, dead, 1314 days 17552.5
L831 62 years, female, stage:Stage IB, alive, 2152 days 17513.9
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 17416.2
L689 69 years, male, stage:Stage IA, alive, 1943 days 16784.4
L569 76 years, female, stage:Stage IA, alive, 2531 days 16306.2
L827 70 years, male, stage:Stage IIB, dead, 1105 days 16189.9
L546 57 years, male, stage:Stage IA, dead, 973 days 16090.6
L663 62 years, female, stage:Stage IB, alive, 2018 days 16045.4
L875 69 years, female, stage:Stage IA, alive, 1675 days 15741.8
L816 73 years, female, stage:Stage IIA, dead, 353 days 15300.1
L458 76 years, female, stage:Stage IA, dead, 223 days 15159.8
L530 76 years, female, stage:Stage IIA, dead, 308 days 15143.5
L607 59 years, male, stage:Stage IB, alive, 2572 days 15138.0
L602 69 years, female, stage:Stage IA, alive, 2277 days 15042.7
L887 77 years, male, stage:Stage IA, dead, 374 days 14991.3
L673 74 years, female, stage:Stage IA, dead, 568 days 14801.7
L662 66 years, male, stage:Stage IA, dead, 865 days 14754.6
L773 64 years, female, stage:Stage IV, dead, 311 days 14514.6
L606 55 years, male, stage:Stage IA, alive, 2336 days 14293.4
L605 74 years, female, stage:Stage IA, alive, 2460 days 14139.7
L413 72 years, female, stage:Stage IIIA, dead, 313 days 14101.6
L599 80 years, male, stage:Stage IB, dead, 2083 days 13957.4
L867 62 years, female, stage:Stage IIIA, dead, 317 days 13944.8
L593 78 years, male, stage:Stage IA, dead, 2436 days 13865.9
L829 76 years, male, stage:Stage IA, alive, 2173 days 13741.0
L543 65 years, male, stage:Stage IA, alive, 2711 days 13583.5
L446 71 years, female, stage:Stage IIB, dead, 415 days 13431.1
L766 59 years, male, stage:Stage IB, alive, 1793 days 13228.5
L746 64 years, female, stage:Stage IIIA, dead, 594 days 13199.0
L585 70 years, female, stage:Stage IIA, dead, 402 days 12779.1
L400 78 years, male, stage:Stage IIA, dead, 1233 days 12740.1
L877 70 years, female, stage:Stage IA, alive, 1599 days 12682.0
L802 62 years, female, stage:Stage IA, dead, 773 days 12680.1
L851 70 years, male, stage:Stage IB, dead, 1315 days 12643.9
L800 66 years, female, stage:Stage IA, dead, 2417 days 12630.0
L484 64 years, female, stage:Stage IA, alive, 2895 days 12615.8
L768 60 years, male, stage:Stage IIIA, dead, 472 days 12171.4
L873 62 years, female, stage:Stage IA, alive, 1740 days 12002.6
L551 62 years, male, stage:Stage IA, alive, 2924 days 11994.5
L885 62 years, female, stage:Stage IA, alive, 1618 days 11764.5
L731 59 years, female, stage:Stage IA, dead, 964 days 11743.9
L626 76 years, female, stage:Stage IA, dead, 1994 days 11609.7
L565 59 years, female, stage:Stage IB, dead, 543 days 11254.9
L725 64 years, female, stage:Stage IA, alive, 1830 days 10817.7
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 10680.6
L810 64 years, female, stage:Stage IIIA, dead, 625 days 10531.0
L832 65 years, female, stage:Stage IA, alive, 2145 days 10458.4
L683 77 years, female, stage:Stage IIA, dead, 612 days 10105.6
L440 80 years, male, stage:Stage IIB, dead, 651 days 9395.9
L791 66 years, female, stage:Stage IIIA, dead, 368 days 9130.4
L617 68 years, male, stage:Stage IIIA, dead, 238 days 9061.2
L616 54 years, male, stage:Stage IA, dead, 410 days 9052.9
L880 75 years, female, stage:Stage IA, alive, 1767 days 8845.6
L620 70 years, female, stage:Stage IIIA, dead, 338 days 8819.6
L601 75 years, male, stage:Stage IB, dead, 2068 days 8624.1
L735 75 years, female, stage:Stage IA, alive, 1830 days 8618.2
L462 67 years, male, stage:Stage IIIA, dead, 568 days 8451.5
L682 64 years, female, stage:Stage IIB, dead, 840 days 8134.1
L828 68 years, female, stage:Stage IIB, alive, 2222 days 8067.7
L557 81 years, female, stage:Stage IB, alive, 2580 days 7827.8
L842 62 years, female, stage:Stage IB, alive, 2005 days 7741.2
L808 48 years, female, stage:Stage IA, alive, 3001 days 7537.6
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 7509.8
L404 74 years, female, stage:Stage IIA, dead, 2318 days 7019.5
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 7003.4
L545 60 years, female, stage:Stage IA, alive, 2874 days 6733.1
L703 71 years, male, stage:Stage IIA, dead, 1137 days 6539.3
L838 71 years, female, stage:Stage IA, dead, 1005 days 6298.6
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 4839.0
L603 70 years, female, stage:Stage IB, dead, 972 days 3347.1
L473 66 years, female, stage:Stage IA, alive, 3021 days 2662.8
L688 57 years, male, stage:Stage IIIA, dead, 789 days 2432.7
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-CO2 is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 8928.83
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 10263.0
Number of samples 489
Samples
Sample Description pTPM
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 43440.8
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 39775.1
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 36803.8
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 35888.8
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 33329.6
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 33011.0
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 32443.5
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 32140.2
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 30748.7
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 29486.0
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 29256.1
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 28337.5
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 27240.4
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 27041.0
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 26295.9
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 25674.8
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 25126.2
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 25096.1
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 24347.7
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 24214.7
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 23776.3
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 22799.5
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 22357.4
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 22231.8
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 22064.1
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 21794.0
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 21629.9
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 21474.4
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 21016.3
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 20854.8
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 20712.9
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 20399.3
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 20303.7
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 20014.2
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 19988.1
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 19987.7
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 19948.7
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 19887.4
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 19868.0
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 19560.3
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 19480.4
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 19478.7
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 19379.0
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 19271.3
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 19140.6
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 19108.0
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 19065.5
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 18852.4
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 18829.2
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 18675.3
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 18513.9
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 18359.8
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 18352.5
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 18236.1
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 18030.9
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 17720.9
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 17692.1
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 17667.7
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 17517.6
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 17233.3
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 17173.2
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 17074.7
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 16833.5
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 16760.1
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 16636.4
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 16548.3
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 16542.8
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 16223.6
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 16221.7
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 16207.5
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 16138.1
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 16121.5
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 16037.5
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 15864.0
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 15858.3
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 15823.6
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 15780.9
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 15647.8
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 15619.4
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 15554.6
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 15518.2
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 15476.6
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 15406.4
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 15281.2
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 15154.4
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 15144.9
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 14927.7
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 14921.1
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 14868.0
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 14774.5
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 14631.2
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 14572.7
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 14545.8
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 14502.9
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 14318.0
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 14246.7
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 14111.8
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 14074.0
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 13906.7
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 13842.3
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 13799.9
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 13771.1
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 13751.0
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 13644.9
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 13624.8
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 13600.4
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 13546.2
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 13466.1
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 13428.4
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 13346.3
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 13329.2
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 13320.1
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 13278.6
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 13256.8
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 13231.1
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 13213.3
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 13158.5
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 13088.6
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 13062.4
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 13030.4
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 13014.4
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 12951.0
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 12922.3
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 12847.9
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 12791.4
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 12787.2
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 12752.1
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 12749.4
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 12698.2
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 12652.2
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 12625.0
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 12455.9
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 12450.3
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 12398.3
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 12381.7
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 12370.3
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 12339.8
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 12295.6
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 12218.2
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 12208.6
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 12196.6
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 12110.0
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 12024.3
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 11938.6
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 11935.4
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 11924.3
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 11916.4
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 11914.5
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 11861.7
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 11780.6
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 11724.6
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 11701.1
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 11655.1
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 11605.6
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 11539.3
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 11537.3
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 11473.8
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 11450.8
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 11407.7
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 11374.7
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 11221.5
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 11220.5
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 11145.5
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 11143.3
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 11128.9
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 11023.5
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 10962.1
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 10962.0
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 10924.8
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 10876.2
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 10829.5
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 10778.2
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 10758.6
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 10691.4
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 10663.7
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 10650.1
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 10637.7
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 10595.5
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 10570.3
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 10561.4
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 10554.4
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 10523.0
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 10508.0
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 10504.5
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 10428.4
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 10424.8
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 10374.2
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 10344.2
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 10306.8
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 10289.9
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 10282.0
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 10267.5
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 10253.9
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 10251.6
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 10249.9
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 10237.2
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 10127.8
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 10078.8
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 10070.7
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 9966.9
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 9929.5
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 9860.1
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 9848.9
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 9844.3
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 9813.4
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 9812.4
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 9780.0
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 9738.0
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 9736.1
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 9689.1
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 9596.8
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 9591.5
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 9549.6
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 9528.2
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 9429.7
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 9407.2
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 9380.1
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 9371.1
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 9312.7
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 9306.3
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 9296.0
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 9288.3
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 9281.6
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 9232.0
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 9166.4
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 9165.7
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 9151.9
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 9100.5
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 9088.0
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 9081.8
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 9076.5
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 9024.6
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 9008.8
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 8992.8
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 8941.7
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 8928.8
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 8917.4
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 8900.1
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 8837.3
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 8829.8
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 8821.7
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 8819.9
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 8760.2
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 8751.4
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 8750.9
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 8717.7
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 8695.2
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 8630.8
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 8602.2
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 8585.5
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 8550.3
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 8549.8
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 8489.0
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 8477.5
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 8460.3
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 8433.3
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 8399.7
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 8320.6
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 8312.3
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 8272.7
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 8205.9
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 8183.3
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 8142.8
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 8128.1
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 8065.8
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 8061.4
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 8060.5
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 8055.6
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 8051.4
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 8049.7
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 8036.7
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 8036.4
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 8021.8
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 8012.2
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 8006.5
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 7964.6
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 7898.7
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 7887.7
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 7882.9
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 7846.0
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 7836.5
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 7822.4
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 7771.7
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 7766.9
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 7725.6
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 7704.7
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 7689.3
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 7660.2
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 7612.2
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 7530.8
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 7511.9
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 7455.7
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 7430.1
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 7381.9
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 7370.5
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 7340.2
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 7339.9
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 7306.5
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 7300.3
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 7278.5
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 7243.9
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 7233.1
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 7232.9
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 7231.0
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 7226.0
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 7218.9
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 7211.4
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 7177.8
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 7175.9
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 7102.6
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 7094.2
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 7084.8
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 7044.5
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 7023.4
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 6994.8
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 6988.5
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 6950.0
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 6894.5
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 6871.6
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 6863.5
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 6861.9
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 6860.0
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 6848.4
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 6841.8
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 6765.8
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 6736.4
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 6720.3
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 6659.3
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 6641.4
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 6640.0
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 6636.3
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 6635.6
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 6607.5
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 6596.2
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 6584.3
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 6539.6
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 6515.7
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 6473.2
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 6459.7
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 6456.2
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 6381.4
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 6355.1
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 6312.6
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 6302.5
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 6249.8
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 6247.7
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 6247.3
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 6222.1
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 6191.6
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 6164.1
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 6156.1
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 6131.6
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 6129.3
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 6129.3
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 6112.8
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 6100.6
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 6095.5
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 6071.9
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 6060.6
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 6019.5
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 5962.8
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 5876.9
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 5835.8
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 5808.1
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 5804.6
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 5804.2
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 5796.1
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 5771.8
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 5766.7
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 5748.1
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 5733.9
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 5733.1
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 5731.1
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 5729.9
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 5717.1
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 5715.3
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 5699.2
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 5697.9
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 5675.5
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 5646.4
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 5637.6
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 5600.9
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 5560.2
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 5553.3
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 5543.1
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 5530.6
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 5515.9
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 5496.1
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 5485.2
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 5481.2
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 5469.5
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 5414.7
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 5403.0
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 5399.6
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 5359.5
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 5350.7
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 5188.8
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 5151.0
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 5122.7
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 5113.1
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 5089.9
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 5079.8
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 5062.6
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 5056.1
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 5050.5
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 5041.7
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 4995.2
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 4947.8
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 4919.6
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 4856.3
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 4817.4
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 4775.9
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 4767.3
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 4759.9
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 4757.9
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 4668.7
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 4663.7
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 4620.3
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 4602.9
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 4591.4
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 4565.5
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 4542.1
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 4535.3
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 4520.6
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 4516.5
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 4495.6
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 4485.4
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 4466.3
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 4416.7
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 4414.7
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 4401.1
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 4388.8
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 4359.0
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 4306.7
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 4299.6
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 4294.3
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 4240.6
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 4226.4
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 4218.2
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 4187.7
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 4148.5
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 4138.4
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 4132.5
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 4128.0
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 4095.0
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 4092.2
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 4084.5
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 4052.5
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 4011.7
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 3971.9
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 3947.3
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 3943.5
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 3906.6
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 3877.1
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 3767.1
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 3755.2
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 3702.9
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 3698.5
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 3648.2
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 3631.8
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 3595.8
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 3581.2
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 3569.1
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 3490.6
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 3460.1
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 3336.6
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 3277.8
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 3269.7
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 3196.1
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 3188.4
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 3137.1
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 3079.6
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 2973.4
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 2919.9
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 2889.7
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 2872.7
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 2793.6
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 2781.9
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 2423.9
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 2322.1
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 2316.5
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 2045.1
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 2012.8
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 1882.0
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 1567.0
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 1502.8
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 1476.4
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 1464.4
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 1397.8
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-CO2 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 15765.2
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 12424.5
Number of samples 68
Samples
Sample Description pTPM
L854 62 years, female, stage:Stage IB, alive, 2256 days 25806.9
L744 75 years, male, stage:Stage IA, alive, 1614 days 19618.8
L586 67 years, male, stage:Stage IIA, dead, 784 days 19437.7
L685 71 years, female, stage:Stage IIB, alive, 1944 days 18853.0
L534 66 years, male, stage:Stage IIA, alive, 2693 days 18286.8
L633 77 years, female, stage:Stage IA, alive, 2102 days 18043.1
L490 58 years, male, stage:Stage IA, dead, 716 days 17843.5
L444 74 years, female, stage:Stage IIB, alive, 3337 days 17329.2
L592 61 years, male, stage:Stage IB, alive, 2368 days 17258.1
L488 61 years, female, stage:Stage IIA, alive, 2993 days 16853.9
L447 67 years, male, stage:Stage IIB, alive, 3203 days 16572.7
L472 71 years, male, stage:Stage IB, dead, 423 days 16113.5
L466 65 years, female, stage:Stage IIIA, dead, 412 days 16070.6
L559 72 years, male, stage:Stage IIB, alive, 2615 days 15998.2
L459 75 years, male, stage:Stage IIA, alive, 3181 days 15782.0
L736 67 years, male, stage:Stage IA, dead, 1195 days 15748.5
L483 65 years, male, stage:Stage IB, dead, 77 days 15677.7
L420 57 years, female, stage:Stage IIB, dead, 295 days 15179.1
L881 70 years, male, stage:Stage IB, alive, 1752 days 15167.9
L755 82 years, male, stage:Stage IIA, dead, 227 days 15148.4
L457 46 years, female, stage:Stage IIA, alive, 2901 days 14995.9
L858 69 years, female, stage:Stage IIB, dead, 558 days 14920.0
L650 69 years, female, stage:Stage IB, dead, 986 days 14663.2
L655 62 years, male, stage:Stage IIA, dead, 1603 days 14585.2
L719 63 years, male, stage:Stage IB, alive, 1615 days 14402.8
L758 84 years, male, stage:Stage IA, dead, 1562 days 14348.6
L818 67 years, male, stage:Stage IB, alive, 2480 days 14213.4
L886 71 years, male, stage:Stage IB, dead, 1932 days 14008.5
L604 67 years, male, stage:Stage IIA, dead, 286 days 14001.5
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 13901.6
L864 66 years, female, stage:Stage IA, alive, 2192 days 13133.2
L767 67 years, male, stage:Stage IA, alive, 1718 days 13096.4
L468 53 years, male, stage:Stage IB, alive, 3004 days 13061.2
L442 75 years, female, stage:Stage IB, dead, 2433 days 12577.1
L529 79 years, female, stage:Stage IA, alive, 2775 days 12540.8
L712 61 years, male, stage:Stage IA, alive, 1698 days 12137.9
L658 65 years, female, stage:Stage IIB, alive, 2083 days 12109.3
L739 49 years, female, stage:Stage IIIA, dead, 352 days 11634.6
L747 74 years, female, stage:Stage IA, dead, 1112 days 11207.1
L456 48 years, male, stage:Stage IIA, dead, 1660 days 11116.5
L856 69 years, male, stage:Stage IA, dead, 1465 days 10874.1
L824 70 years, male, stage:Stage IA, dead, 665 days 10439.4
L715 69 years, female, stage:Stage IIIA, dead, 150 days 10047.0
L568 77 years, female, stage:Stage IIB, dead, 71 days 10012.4
L884 71 years, male, stage:Stage IIA, alive, 1627 days 9814.7
L496 77 years, male, stage:Stage IB, alive, 2761 days 9572.6
L652 82 years, male, stage:Stage IA, dead, 5 days 9301.8
L464 66 years, male, stage:Stage IB, dead, 1935 days 9202.6
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 9116.0
L857 69 years, male, stage:Stage IB, dead, 226 days 9057.2
L852 64 years, male, stage:Stage IB, dead, 700 days 8862.8
L470 78 years, female, stage:Stage IB, dead, 1774 days 8843.2
L723 67 years, male, stage:Stage IIA, dead, 433 days 8822.9
L756 72 years, male, stage:Stage IB, alive, 1796 days 8520.1
L788 54 years, female, stage:Stage IA, alive, 3385 days 8492.2
L406 64 years, male, stage:Stage IA, alive, 3057 days 8475.8
L753 61 years, male, stage:Stage IIA, alive, 1705 days 8284.4
L572 58 years, male, stage:Stage IA, alive, 2532 days 7927.2
L608 73 years, male, stage:Stage IA, alive, 2350 days 7727.9
L563 61 years, female, stage:Stage IIB, dead, 1216 days 7662.1
L760 80 years, male, stage:Stage IIA, alive, 1895 days 7540.0
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 7247.3
L860 77 years, male, stage:Stage IA, alive, 2056 days 7011.9
L661 66 years, male, stage:Stage IA, dead, 1123 days 6803.8
L642 67 years, male, stage:Stage IB, dead, 1167 days 6738.4
L820 73 years, female, stage:Stage IA, alive, 2405 days 6602.9
L644 67 years, male, stage:Stage IA, dead, 282 days 5018.0
L539 78 years, male, stage:Stage IB, dead, 370 days 3407.3
Show allShow less
LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0000920017 Tumor N/A
CPT0000930003 Normal N/A
CPT0001060010 Tumor N/A
CPT0001070003 Normal N/A
CPT0001380003 Tumor N/A
CPT0001390003 Normal N/A
CPT0001580009 Tumor N/A
CPT0001590003 Normal N/A
CPT0001660013 Tumor N/A
CPT0001690003 Normal N/A
CPT0001800013 Tumor N/A
CPT0001810003 Normal N/A
CPT0001960003 Tumor N/A
CPT0001970003 Normal N/A
CPT0008410003 Tumor N/A
CPT0008420003 Normal N/A
CPT0008450003 Tumor N/A
CPT0011710004 Tumor N/A
CPT0011750003 Normal N/A
CPT0011910004 Tumor N/A
CPT0011930003 Normal N/A
CPT0013600003 Tumor N/A
CPT0013630003 Normal N/A
CPT0013880003 Tumor N/A
CPT0013910003 Normal N/A
CPT0014260003 Tumor N/A
CPT0014290003 Normal N/A
CPT0014860003 Tumor N/A
CPT0014930003 Normal N/A
CPT0015410003 Tumor N/A
CPT0015420003 Normal N/A
CPT0021450003 Tumor N/A
CPT0021490003 Normal N/A
CPT0023310003 Tumor N/A
CPT0023320003 Normal N/A
CPT0051690004 Tumor N/A
CPT0052170004 Tumor N/A
CPT0052940004 Tumor N/A
CPT0053040004 Tumor N/A
CPT0055100004 Tumor N/A
CPT0062810003 Normal N/A
CPT0063730003 Tumor N/A
CPT0063750003 Normal N/A
CPT0063810003 Tumor N/A
CPT0063840003 Normal N/A
CPT0066780003 Tumor N/A
CPT0066810003 Normal N/A
CPT0066890003 Tumor N/A
CPT0066930003 Normal N/A
CPT0067070003 Tumor N/A
CPT0067110003 Normal N/A
CPT0067250003 Tumor N/A
CPT0067290003 Normal N/A
CPT0067450003 Tumor N/A
CPT0067470004 Normal N/A
CPT0067620003 Tumor N/A
CPT0067770003 Normal N/A
CPT0067940003 Tumor N/A
CPT0067950003 Normal N/A
CPT0068100003 Tumor N/A
CPT0068130003 Normal N/A
CPT0068610003 Tumor N/A
CPT0068650003 Normal N/A
CPT0068800003 Tumor N/A
CPT0068830003 Normal N/A
CPT0069360003 Tumor N/A
CPT0069370003 Normal N/A
CPT0069520003 Tumor N/A
CPT0069550003 Normal N/A
CPT0069700003 Tumor N/A
CPT0069720003 Normal N/A
CPT0070060003 Tumor N/A
CPT0070080003 Normal N/A
CPT0079830003 Tumor N/A
CPT0079850003 Normal N/A
CPT0082740004 Tumor N/A
CPT0082770003 Normal N/A
CPT0082850004 Tumor N/A
CPT0082890003 Normal N/A
CPT0083100003 Tumor N/A
CPT0083140003 Normal N/A
CPT0083390004 Tumor N/A
CPT0083420003 Normal N/A
CPT0083780003 Tumor N/A
CPT0083810003 Normal N/A
CPT0084140003 Tumor N/A
CPT0084170003 Normal N/A
CPT0086310003 Tumor N/A
CPT0086320003 Normal N/A
CPT0086750003 Tumor N/A
CPT0086770003 Normal N/A
CPT0089340003 Tumor N/A
CPT0089360003 Normal N/A
CPT0090170004 Tumor N/A
CPT0090200003 Normal N/A
CPT0090340003 Tumor N/A
CPT0090370003 Normal N/A
CPT0090570004 Tumor N/A
CPT0090600003 Normal N/A
CPT0090700003 Tumor N/A
CPT0090720003 Normal N/A
CPT0090860003 Tumor N/A
CPT0090900004 Normal N/A
CPT0091240003 Tumor N/A
CPT0091260003 Normal N/A
CPT0091860003 Tumor N/A
CPT0091870003 Normal N/A
CPT0092240003 Tumor N/A
CPT0092250003 Normal N/A
CPT0092530003 Tumor N/A
CPT0092930003 Tumor N/A
CPT0092940003 Normal N/A
CPT0097580003 Tumor N/A
CPT0097600003 Normal N/A
CPT0098130003 Tumor N/A
CPT0102450003 Tumor N/A
CPT0102480003 Normal N/A
CPT0104630003 Tumor N/A
CPT0104650003 Normal N/A
CPT0104750003 Tumor N/A
CPT0104760003 Normal N/A
CPT0104970003 Tumor N/A
CPT0105010004 Normal N/A
CPT0105060003 Tumor N/A
CPT0105190003 Normal N/A
CPT0105230003 Tumor N/A
CPT0105250003 Normal N/A
CPT0105270003 Tumor N/A
CPT0105330003 Tumor N/A
CPT0105370004 Normal N/A
CPT0105510003 Tumor N/A
CPT0105550003 Normal N/A
CPT0105600003 Tumor N/A
CPT0105610003 Normal N/A
CPT0105630003 Tumor N/A
CPT0105680003 Normal N/A
CPT0105710003 Tumor N/A
CPT0105740003 Normal N/A
CPT0105940003 Tumor N/A
CPT0105980003 Normal N/A
CPT0106100003 Normal N/A
CPT0106110003 Tumor N/A
CPT0109680004 Tumor N/A
CPT0109700003 Normal N/A
CPT0109710003 Normal N/A
CPT0109720004 Tumor N/A
CPT0109740004 Tumor N/A
CPT0109760003 Normal N/A
CPT0109830004 Tumor N/A
CPT0109850003 Normal N/A
CPT0110860004 Tumor N/A
CPT0110890003 Normal N/A
CPT0110980004 Tumor N/A
CPT0111300003 Tumor N/A
CPT0111480003 Normal N/A
CPT0111590003 Normal N/A
CPT0112060003 Tumor N/A
CPT0112080003 Normal N/A
CPT0113210003 Tumor N/A
CPT0113220003 Normal N/A
CPT0113990003 Tumor N/A
CPT0114010003 Normal N/A
CPT0114660004 Tumor N/A
CPT0114690003 Normal N/A
CPT0114840003 Tumor N/A
CPT0114880003 Normal N/A
CPT0115070003 Tumor N/A
CPT0115090003 Normal N/A
CPT0117970003 Tumor N/A
CPT0118010003 Normal N/A
CPT0118160003 Tumor N/A
CPT0118180003 Normal N/A
CPT0118200003 Tumor N/A
CPT0118240003 Normal N/A
CPT0118340003 Tumor N/A
CPT0118360003 Normal N/A
CPT0118570003 Tumor N/A
CPT0118600003 Normal N/A
CPT0118620003 Tumor N/A
CPT0118650003 Normal N/A
CPT0118810003 Tumor N/A
CPT0118830003 Normal N/A
CPT0118880003 Tumor N/A
CPT0118890003 Normal N/A
CPT0125810003 Tumor N/A
CPT0125830003 Normal N/A
CPT0146580004 Tumor N/A
CPT0146600003 Normal N/A
CPT0146680004 Tumor N/A
CPT0146700003 Normal N/A
CPT0146780004 Tumor N/A
CPT0146800003 Normal N/A
CPT0146880004 Tumor N/A
CPT0146980004 Tumor N/A
CPT0147000003 Normal N/A
CPT0147080004 Tumor N/A
CPT0147100003 Normal N/A
CPT0147380004 Tumor N/A
CPT0147400003 Normal N/A
CPT0147480004 Tumor N/A
CPT0147500003 Normal N/A
CPT0147580004 Tumor N/A
CPT0147600003 Normal N/A
CPT0147880004 Tumor N/A
CPT0147900003 Normal N/A
CPT0147980004 Tumor N/A
CPT0148000003 Normal N/A
CPT0148080004 Tumor N/A
CPT0148100003 Normal N/A
CPT0148180004 Tumor N/A
CPT0148200003 Normal N/A
CPT0148280004 Tumor N/A
CPT0148300003 Normal N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0209510003 Normal N/A
CPT0001030003 Normal N/A
CPT0123370003 Normal N/A
CPT0175560003 Tumor N/A
CPT0218280003 Tumor N/A
CPT0126470003 Normal N/A
CPT0112660003 Normal N/A
CPT0237550004 Tumor N/A
CPT0245790003 Normal N/A
CPT0007740003 Tumor N/A
CPT0102840003 Normal N/A
CPT0233640003 Normal N/A
CPT0238130003 Normal N/A
CPT0221650003 Tumor N/A
CPT0083980003 Tumor N/A
CPT0130410003 Tumor N/A
CPT0112580003 Tumor N/A
CPT0241170003 Tumor N/A
CPT0086260003 Tumor N/A
CPT0064050003 Normal N/A
CPT0233330003 Normal N/A
CPT0079110003 Normal N/A
CPT0126400003 Normal N/A
CPT0104930003 Tumor N/A
CPT0105430003 Normal N/A
CPT0237200004 Tumor N/A
CPT0146400003 Normal N/A
CPT0063440003 Normal N/A
CPT0108560003 Tumor N/A
CPT0221220003 Normal N/A
CPT0079060003 Normal N/A
CPT0126830003 Normal N/A
CPT0208770003 Tumor N/A
CPT0232670003 Tumor N/A
CPT0222730003 Tumor N/A
CPT0209040003 Normal N/A
CPT0234930004 Tumor N/A
CPT0090440003 Tumor N/A
CPT0104380003 Normal N/A
CPT0202740003 Normal N/A
CPT0204600003 Tumor N/A
CPT0237080003 Normal N/A
CPT0183250004 Tumor N/A
CPT0175410003 Normal N/A
CPT0098770003 Tumor N/A
CPT0196810003 Tumor N/A
CPT0112540003 Tumor N/A
CPT0023470003 Tumor N/A
CPT0202530004 Tumor N/A
CPT0117770003 Normal N/A
CPT0245840003 Normal N/A
CPT0233600003 Tumor N/A
CPT0192540004 Tumor N/A
CPT0126740003 Tumor N/A
CPT0223820003 Normal N/A
CPT0197150003 Tumor N/A
CPT0227020003 Tumor N/A
CPT0197090003 Tumor N/A
CPT0197170003 Normal N/A
CPT0130440004 Normal N/A
CPT0146380004 Tumor N/A
CPT0245780003 Tumor N/A
CPT0091610003 Tumor N/A
CPT0175390003 Tumor N/A
CPT0010050003 Tumor N/A
CPT0136640003 Tumor N/A
CPT0111150004 Tumor N/A
CPT0234560003 Tumor N/A
CPT0204820003 Normal N/A
CPT0197860003 Normal N/A
CPT0098800003 Normal N/A
CPT0237990003 Normal N/A
CPT0068280003 Tumor N/A
CPT0108600003 Normal N/A
CPT0175160003 Normal N/A
CPT0091090003 Normal N/A
CPT0186180003 Tumor N/A
CPT0208780003 Normal N/A
CPT0105420003 Tumor N/A
CPT0079100003 Tumor N/A
CPT0225470003 Normal N/A
CPT0101130003 Tumor N/A
CPT0186210003 Normal N/A
CPT0079050003 Tumor N/A
CPT0233160003 Normal N/A
CPT0063430003 Tumor N/A
CPT0086270003 Normal N/A
CPT0089880003 Tumor N/A
CPT0219360003 Tumor N/A
CPT0202580004 Normal N/A
CPT0204660003 Normal N/A
CPT0146480004 Tumor N/A
CPT0237780003 Normal N/A
CPT0223790003 Tumor N/A
CPT0128890003 Tumor N/A
CPT0197380003 Normal N/A
CPT0069900003 Normal N/A
CPT0091820003 Tumor N/A
CPT0197480003 Tumor N/A
CPT0222740003 Normal N/A
CPT0126670003 Tumor N/A
CPT0146500003 Normal N/A
CPT0202220004 Normal N/A
CPT0175270003 Normal N/A
CPT0233120003 Tumor N/A
CPT0217420003 Tumor N/A
CPT0063480003 Tumor N/A
CPT0196820003 Normal N/A
CPT0091050003 Tumor N/A
CPT0126390003 Tumor N/A
CPT0186140003 Normal N/A
CPT0115860003 Normal N/A
CPT0007760003 Normal N/A
CPT0175120003 Tumor N/A
CPT0237410004 Tumor N/A
CPT0010060003 Normal N/A
CPT0232690003 Normal N/A
CPT0147180004 Tumor N/A
CPT0130270003 Tumor N/A
CPT0191750003 Normal N/A
CPT0238110004 Tumor N/A
CPT0183270003 Normal N/A
CPT0087210003 Normal N/A
CPT0237570003 Normal N/A
CPT0126450003 Tumor N/A
CPT0023500003 Normal N/A
CPT0104950003 Normal N/A
CPT0126810003 Tumor N/A
CPT0221200003 Tumor N/A
CPT0063500003 Normal N/A
CPT0197520003 Normal N/A
CPT0245890003 Normal N/A
CPT0128900003 Normal N/A
CPT0227400003 Tumor N/A
CPT0130070003 Normal N/A
CPT0209020004 Tumor N/A
CPT0069890003 Tumor N/A
CPT0191710003 Tumor N/A
CPT0117720003 Tumor N/A
CPT0126530003 Tumor N/A
CPT0190550003 Tumor N/A
CPT0123350003 Tumor N/A
CPT0091620003 Normal N/A
CPT0195510003 Tumor N/A
CPT0126760003 Normal N/A
CPT0197210003 Tumor N/A
CPT0130310003 Normal N/A
CPT0175260003 Tumor N/A
CPT0112600003 Normal N/A
CPT0218310003 Normal N/A
CPT0202040003 Normal N/A
CPT0234820003 Normal N/A
CPT0130030003 Tumor N/A
CPT0186130003 Tumor N/A
CPT0225380003 Tumor N/A
CPT0111000004 Normal N/A
CPT0202400004 Normal N/A
CPT0191860003 Tumor N/A
CPT0234950004 Normal N/A
CPT0001020003 Tumor N/A
CPT0237060004 Tumor N/A
CPT0202720003 Tumor N/A
CPT0209490003 Tumor N/A
CPT0104360003 Tumor N/A
CPT0187370003 Tumor N/A
CPT0112730003 Normal N/A
CPT0112650003 Tumor N/A
CPT0115830003 Tumor N/A
CPT0202350004 Tumor N/A
CPT0204990003 Tumor N/A
CPT0237210003 Normal N/A
CPT0204800003 Tumor N/A
CPT0202170003 Tumor N/A
CPT0205000003 Normal N/A
CPT0245880003 Tumor N/A
CPT0207210003 Tumor N/A
CPT0236420003 Tumor N/A
CPT0233320003 Tumor N/A
CPT0064040003 Tumor N/A
CPT0197100003 Normal N/A
CPT0207250003 Normal N/A
CPT0234580003 Normal N/A
CPT0227070003 Normal N/A
CPT0241210003 Normal N/A
CPT0087190003 Tumor N/A
CPT0147200003 Normal N/A
CPT0083990003 Normal N/A
CPT0192590004 Normal N/A
CPT0221660003 Normal N/A
CPT0237760003 Tumor N/A
CPT0202020008 Tumor N/A
CPT0237430003 Normal N/A
CPT0219390003 Normal N/A
CPT0068320003 Normal N/A
CPT0195520003 Normal N/A
CPT0187380003 Normal N/A
CPT0227420003 Normal N/A
CPT0102790003 Tumor N/A
CPT0197740003 Tumor N/A
CPT0237690004 Tumor N/A
CPT0245830003 Tumor N/A
CPT0147700003 Normal N/A
CPT0236430003 Normal N/A
CPT0191930003 Normal N/A
CPT0147680004 Tumor N/A
CPT0217490003 Normal N/A
CPT0112550003 Normal N/A
CPT0136660003 Normal N/A
CPT0237710003 Normal N/A
CPT0112720003 Tumor N/A
CPT0234790003 Tumor N/A
CPT0237970004 Tumor N/A
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA051505

Antibody HPA054758

Antibody CAB016243
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS
Adenocarcinoma, NOS
Adenocarcinoma, metastatic, NOS
Squamous cell carcinoma, NOS
Squamous cell carcinoma, metastatic, NOS

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org