Expression of MT-CYB in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

MT-CYB is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 6091.06

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

8502.6

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	28215.8
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	27155.2
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	24655.1
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	24000.4
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	22680.9
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	22631.9
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	22267.9
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	21954.5
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	19662.4
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	19380.1
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	18923.7
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	18373.8
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	18038.6
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	18008.7
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	17977.1
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	17954.1
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	17858.3
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	17780.8
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	17335.8
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	17294.0
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	17177.2
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	16887.4
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	16777.5
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	16564.4
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	16269.1
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	16183.1
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	16089.8
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	16057.9
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	15779.8
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	15643.5
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	15450.8
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	15277.2
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	15040.9
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	14986.1
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	14879.9
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	14843.8
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	14720.7
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	14574.7
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	14497.6
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	14388.2
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	14350.5
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	14270.8
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	14238.8
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	14224.4
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	14184.8
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	14137.6
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	14102.3
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	14087.1
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	13898.2
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	13719.6
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	13688.2
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	13685.3
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	13655.1
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	13642.6
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	13642.1
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	13623.6
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	13381.7
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	13364.9
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	13363.9
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	13318.2
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	13302.8
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	13302.4
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	13250.9
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	13179.6
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	13154.1
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	12982.4
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	12965.5
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	12960.4
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	12787.2
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	12620.7
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	12592.9
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	12566.4
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	12364.1
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	12312.1
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	12241.0
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	12050.3
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	11899.7
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	11874.8
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	11661.8
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	11525.6
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	11495.7
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	11488.4
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	11403.0
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	11269.6
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	11241.5
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	11235.1
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	11216.1
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	11140.3
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	11138.6
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	11080.9
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	11052.6
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	11016.1
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	10999.4
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	10961.2
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	10935.2
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	10912.6
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	10881.1
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	10879.4
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	10817.0
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	10816.2
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	10706.2
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	10688.8
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	10664.9
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	10549.2
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	10496.9
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	10391.2
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	10339.1
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	10336.7
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	10274.8
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	10222.6
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	10217.7
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	10173.8
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	10172.0
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	10158.1
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	10153.7
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	10153.1
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	10151.4
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	10066.9
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	10063.2
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	10007.6
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	9982.2
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	9979.7
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	9935.1
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	9826.0
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	9732.4
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	9683.5
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	9571.7
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	9560.3
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	9524.1
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	9508.3
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	9500.1
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	9413.9
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	9380.0
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	9379.1
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	9289.2
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	9244.2
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	9223.2
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	9121.4
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	9076.5
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	9056.3
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	9037.7
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	8993.6
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	8991.9
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	8970.0
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	8934.1
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	8857.2
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	8843.3
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	8795.3
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	8768.4
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	8765.4
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	8763.4
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	8676.3
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	8671.2
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	8635.3
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	8584.6
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	8507.9
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	8448.2
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	8432.9
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	8423.4
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	8365.2
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	8325.5
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	8276.6
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	8269.5
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	8154.0
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	8152.7
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	8130.3
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	8058.7
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	8042.3
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	8036.5
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	8017.0
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	7988.1
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	7969.5
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	7875.8
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	7873.4
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	7857.9
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	7754.8
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	7739.2
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	7723.3
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	7702.0
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	7695.4
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	7642.5
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	7631.2
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	7630.2
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	7611.9
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	7604.6
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	7571.0
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	7568.9
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	7514.4
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	7427.4
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	7414.6
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	7400.6
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	7391.9
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	7388.7
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	7311.5
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	7300.3
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	7179.5
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	7175.0
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	7099.6
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	7092.1
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	7059.3
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	7050.1
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	7026.5
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	7005.7
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	6970.4
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	6965.5
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	6949.4
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	6946.7
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	6938.3
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	6847.9
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	6837.7
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	6813.0
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	6771.7
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	6748.1
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	6682.2
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	6622.2
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	6535.2
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	6508.5
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	6490.8
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	6409.0
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	6383.8
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	6379.8
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	6351.0
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	6261.5
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	6258.3
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	6250.6
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	6244.4
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	6236.1
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	6218.7
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	6214.5
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	6173.6
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	6156.6
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	6148.4
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	6143.1
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	6142.9
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	6091.1
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	6060.6
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	6058.6
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	6057.7
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	6022.3
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	5955.9
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	5920.9
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	5898.6
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	5843.5
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	5824.4
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	5746.1
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	5690.5
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	5681.2
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	5651.0
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	5603.4
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	5560.1
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	5519.4
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	5413.6
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	5406.7
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	5400.9
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	5298.7
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	5271.8
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	5243.5
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	5222.3
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	5168.3
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	5161.6
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	5119.3
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	5090.4
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	5047.4
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	5019.4
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	4980.5
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	4945.3
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	4917.1
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	4909.2
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	4907.0
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	4765.2
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	4744.2
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	4731.5
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	4702.0
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	4689.8
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	4677.6
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	4650.8
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	4640.3
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	4556.4
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	4543.3
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	4515.6
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	4496.5
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	4480.3
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	4465.0
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	4458.4
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	4414.1
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	4394.9
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	4382.5
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	4343.0
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	4328.6
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	4312.9
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	4309.3
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	4262.7
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	4258.1
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	4205.4
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	4180.4
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	4145.6
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	4131.4
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	4097.5
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	4085.6
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	4072.8
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	3993.1
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	3990.5
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	3931.4
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	3890.1
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	3853.0
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	3833.9
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	3826.1
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	3815.1
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	3721.4
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	3716.7
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	3679.8
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	3631.4
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	3619.9
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	3555.5
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	3554.9
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	3531.2
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	3524.2
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	3515.8
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	3513.6
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	3505.9
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	3496.3
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	3364.3
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	3349.9
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	3294.5
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	3280.0
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	3279.7
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	3258.5
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	3194.2
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	3185.0
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	3129.7
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	3094.2
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	3046.4
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	2948.0
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	2872.0
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	2870.8
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	2860.0
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	2659.2
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	2652.8
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	2650.6
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	2606.9
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	2592.4
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	2371.1
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	2346.8
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	2315.2
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	2280.7
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	2267.0
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	2250.4
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	2195.3
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	2014.9
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	1943.9
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	1922.4
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	1792.5
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	1574.7
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	1498.6
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	1429.7
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	1383.1
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	1382.1
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	1280.5
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	1230.8
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	1187.3
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	889.5
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	583.9
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
471	Tumor	N/A
351	Tumor	N/A
472	Normal	N/A
231	Tumor	N/A
352	Normal	N/A
473	Tumor	N/A
111	Normal	N/A
232	Normal	N/A
353	Tumor	N/A
474	Normal	N/A
112	Tumor	N/A
354	Normal	N/A
113	Tumor	N/A
355	Tumor	N/A
114	Normal	N/A
356	Normal	N/A
477	Tumor	N/A
357	Tumor	N/A
478	Normal	N/A
358	Normal	N/A
911	Tumor	N/A
912	Normal	N/A
913	Tumor	N/A
914	Normal	N/A
915	Tumor	N/A
916	Normal	N/A
917	Tumor	N/A
918	Normal	N/A
481	Tumor	N/A
361	Tumor	N/A
482	Normal	N/A
362	Normal	N/A
483	Tumor	N/A
363	Tumor	N/A
484	Normal	N/A
364	Normal	N/A
123	Tumor	N/A
365	Tumor	N/A
124	Normal	N/A
366	Normal	N/A
487	Tumor	N/A
125	Tumor	N/A
367	Tumor	N/A
488	Normal	N/A
126	Normal	N/A
368	Normal	N/A
127	Tumor	N/A
128	Normal	N/A
921	Tumor	N/A
922	Normal	N/A
923	Tumor	N/A
924	Normal	N/A
925	Tumor	N/A
926	Normal	N/A
491	Tumor	N/A
492	Normal	N/A
493	Tumor	N/A
131	Tumor	N/A
494	Normal	N/A
132	Normal	N/A
375	Tumor	N/A
376	Normal	N/A
497	Tumor	N/A
135	Tumor	N/A
498	Normal	N/A
136	Normal	N/A
257	Tumor	N/A
137	Tumor	N/A
258	Normal	N/A
138	Normal	N/A
813	Tumor	N/A
814	Normal	N/A
815	Tumor	N/A
816	Normal	N/A
937	Tumor	N/A
817	Tumor	N/A
938	Normal	N/A
818	Normal	N/A
261	Tumor	N/A
141	Tumor	N/A
262	Normal	N/A
383	Tumor	N/A
142	Normal	N/A
384	Normal	N/A
385	Tumor	N/A
386	Normal	N/A
145	Tumor	N/A
387	Tumor	N/A
146	Normal	N/A
267	Tumor	N/A
388	Normal	N/A
147	Tumor	N/A
268	Normal	N/A
148	Normal	N/A
943	Tumor	N/A
823	Tumor	N/A
944	Normal	N/A
824	Normal	N/A
1022	Normal	N/A
1021	Tumor	N/A
391	Tumor	N/A
271	Tumor	N/A
392	Normal	N/A
272	Normal	N/A
393	Tumor	N/A
394	Normal	N/A
395	Tumor	N/A
396	Normal	N/A
277	Tumor	N/A
1016	Normal	N/A
278	Normal	N/A
1015	Tumor	N/A
1014	Normal	N/A
951	Tumor	N/A
1013	Tumor	N/A
952	Normal	N/A
953	Tumor	N/A
954	Normal	N/A
713	Tumor	N/A
955	Tumor	N/A
714	Normal	N/A
956	Normal	N/A
715	Tumor	N/A
957	Tumor	N/A
716	Normal	N/A
958	Normal	N/A
1032	Normal	N/A
1031	Tumor	N/A
161	Tumor	N/A
162	Normal	N/A
283	Tumor	N/A
284	Normal	N/A
285	Tumor	N/A
286	Normal	N/A
1028	Normal	N/A
1027	Tumor	N/A
1026	Normal	N/A
1025	Tumor	N/A
721	Tumor	N/A
963	Tumor	N/A
722	Normal	N/A
964	Normal	N/A
723	Tumor	N/A
965	Tumor	N/A
724	Normal	N/A
966	Normal	N/A
967	Tumor	N/A
968	Normal	N/A
727	Tumor	N/A
728	Normal	N/A
1044	Normal	N/A
1043	Tumor	N/A
1042	Normal	N/A
1041	Tumor	N/A
171	Tumor	N/A
172	Normal	N/A
297	Tumor	N/A
298	Normal	N/A
851	Tumor	N/A
852	Normal	N/A
975	Tumor	N/A
976	Normal	N/A
977	Tumor	N/A
615	Tumor	N/A
857	Tumor	N/A
978	Normal	N/A
616	Normal	N/A
737	Tumor	N/A
858	Normal	N/A
617	Tumor	N/A
738	Normal	N/A
618	Normal	N/A
185	Tumor	N/A
186	Normal	N/A
187	Tumor	N/A
188	Normal	N/A
981	Tumor	N/A
861	Tumor	N/A
982	Normal	N/A
741	Tumor	N/A
862	Normal	N/A
983	Tumor	N/A
742	Normal	N/A
863	Tumor	N/A
984	Normal	N/A
1046	Normal	N/A
743	Tumor	N/A
864	Normal	N/A
1045	Tumor	N/A
744	Normal	N/A
865	Tumor	N/A
745	Tumor	N/A
866	Normal	N/A
746	Normal	N/A
867	Tumor	N/A
868	Normal	N/A
627	Tumor	N/A
628	Normal	N/A
191	Tumor	N/A
192	Normal	N/A
195	Tumor	N/A
196	Normal	N/A
873	Tumor	N/A
874	Normal	N/A
513	Tumor	N/A
755	Tumor	N/A
514	Normal	N/A
635	Tumor	N/A
756	Normal	N/A
877	Tumor	N/A
515	Tumor	N/A
636	Normal	N/A
878	Normal	N/A
516	Normal	N/A
517	Tumor	N/A
518	Normal	N/A
881	Tumor	N/A
882	Normal	N/A
641	Tumor	N/A
883	Tumor	N/A
642	Normal	N/A
884	Normal	N/A
523	Tumor	N/A
524	Normal	N/A
525	Tumor	N/A
526	Normal	N/A
647	Tumor	N/A
527	Tumor	N/A
648	Normal	N/A
528	Normal	N/A
411	Tumor	N/A
412	Normal	N/A
533	Tumor	N/A
413	Tumor	N/A
534	Normal	N/A
414	Normal	N/A
535	Tumor	N/A
777	Tumor	N/A
415	Tumor	N/A
536	Normal	N/A
778	Normal	N/A
416	Normal	N/A
537	Tumor	N/A
538	Normal	N/A
661	Tumor	N/A
662	Normal	N/A
421	Tumor	N/A
663	Tumor	N/A
422	Normal	N/A
664	Normal	N/A
785	Tumor	N/A
423	Tumor	N/A
665	Tumor	N/A
786	Normal	N/A
424	Normal	N/A
545	Tumor	N/A
666	Normal	N/A
425	Tumor	N/A
546	Normal	N/A
426	Normal	N/A
427	Tumor	N/A
428	Normal	N/A
671	Tumor	N/A
672	Normal	N/A
431	Tumor	N/A
311	Tumor	N/A
432	Normal	N/A
553	Tumor	N/A
312	Normal	N/A
433	Tumor	N/A
554	Normal	N/A
313	Tumor	N/A
434	Normal	N/A
314	Normal	N/A
435	Tumor	N/A
436	Normal	N/A
557	Tumor	N/A
558	Normal	N/A
563	Tumor	N/A
443	Tumor	N/A
564	Normal	N/A
685	Tumor	N/A
444	Normal	N/A
686	Normal	N/A
445	Tumor	N/A
446	Normal	N/A
567	Tumor	N/A
447	Tumor	N/A
568	Normal	N/A
327	Tumor	N/A
448	Normal	N/A
328	Normal	N/A
571	Tumor	N/A
451	Tumor	N/A
572	Normal	N/A
331	Tumor	N/A
452	Normal	N/A
573	Tumor	N/A
211	Tumor	N/A
332	Normal	N/A
574	Normal	N/A
695	Tumor	N/A
212	Normal	N/A
696	Normal	N/A
213	Tumor	N/A
455	Tumor	N/A
697	Tumor	N/A
214	Normal	N/A
456	Normal	N/A
698	Normal	N/A
217	Tumor	N/A
218	Normal	N/A
461	Tumor	N/A
341	Tumor	N/A
462	Normal	N/A
221	Tumor	N/A
342	Normal	N/A
463	Tumor	N/A
222	Normal	N/A
343	Tumor	N/A
464	Normal	N/A
223	Tumor	N/A
344	Normal	N/A
465	Tumor	N/A
224	Normal	N/A
466	Normal	N/A
467	Tumor	N/A
468	Normal	N/A
227	Tumor	N/A
228	Normal	N/A
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA068400	Antibody CAB032215
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma