We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
MT-CYB
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • MT-CYB
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
AND
VALIDATION
Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-CYB is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 5211.93
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4858.2
Number of samples 497
Samples
Sample Description pTPM
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 21391.7
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 19773.1
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 18177.4
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 16829.7
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 16301.7
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 15208.7
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 14880.9
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 14879.5
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 14622.5
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 13947.7
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 13310.1
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 13287.3
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 13118.1
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 12936.5
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 12839.2
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 12812.2
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 12586.4
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 12495.5
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 12285.3
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 12249.7
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 12155.8
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 12152.7
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 12017.5
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 11969.4
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 11967.5
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 11893.4
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 11432.8
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 11321.3
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 11314.5
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 10945.4
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 10708.1
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 10579.7
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 10487.0
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 10458.4
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 10417.8
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 10393.3
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 10308.1
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 10021.0
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 9988.9
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 9988.6
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 9987.5
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 9982.4
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 9801.1
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 9785.8
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 9759.2
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 9716.9
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 9653.3
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 9627.6
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 9595.0
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 9590.9
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 9463.4
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 9307.0
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 9138.1
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 9129.9
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 9095.4
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 9075.2
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 9072.5
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 9060.9
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 9039.9
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 9037.0
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 9005.1
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 8993.7
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 8993.4
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 8987.3
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 8975.8
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 8923.1
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 8753.9
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 8751.9
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 8587.9
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 8584.1
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 8568.0
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 8502.7
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 8363.7
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 8226.2
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 8210.4
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 8176.7
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 8099.4
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 7948.6
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 7936.1
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 7882.6
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 7870.3
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 7868.6
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 7842.0
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 7840.8
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 7793.7
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 7766.5
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 7623.1
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 7595.1
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 7534.2
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 7461.1
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 7356.3
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 7309.8
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 7296.4
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 7287.6
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 7228.5
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 7079.8
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 7026.7
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 6998.5
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 6985.7
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 6984.7
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 6936.1
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 6888.2
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 6871.3
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 6861.6
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 6861.5
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 6858.4
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 6811.3
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 6781.9
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 6767.6
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 6724.6
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 6712.6
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 6689.6
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 6546.9
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 6464.2
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 6362.5
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 6350.9
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 6302.3
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 6266.4
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 6266.4
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 6244.5
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 6222.2
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 6221.5
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 6126.2
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 6117.7
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 6070.2
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 6059.8
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 6049.6
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 6043.1
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 6040.9
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 5992.4
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 5982.8
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 5948.6
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 5863.0
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 5859.4
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 5844.0
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 5840.3
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 5832.7
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 5818.1
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 5803.6
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 5768.3
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 5696.9
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 5688.9
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 5683.6
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 5669.7
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 5605.5
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 5575.1
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 5527.3
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 5521.2
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 5508.2
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 5497.0
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 5467.1
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 5430.8
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 5430.3
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 5422.3
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 5420.8
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 5353.9
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 5330.8
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 5323.3
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 5309.0
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 5302.7
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 5270.2
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 5241.8
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 5237.1
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 5211.9
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 5199.2
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 5172.8
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 5170.0
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 5163.3
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 5142.9
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 5117.0
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 5112.6
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 5107.1
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 5103.4
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 5091.0
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 5072.4
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 5041.1
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 5035.5
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 5017.4
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 4996.1
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 4995.2
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 4984.4
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 4960.0
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 4959.3
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 4954.7
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 4917.2
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 4901.5
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 4884.9
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 4871.1
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 4870.0
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 4857.6
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 4839.8
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 4836.5
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 4826.3
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 4811.6
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 4809.4
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 4794.1
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 4790.7
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 4790.0
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 4783.9
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 4780.4
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 4775.8
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 4771.8
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 4763.3
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 4751.3
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 4739.2
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 4711.3
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 4677.8
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 4623.5
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 4609.3
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 4597.0
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 4587.7
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 4579.4
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 4557.0
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 4555.4
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 4543.8
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 4523.3
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 4511.5
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 4504.3
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 4465.6
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 4461.1
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 4422.8
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 4419.4
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 4369.5
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 4359.3
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 4323.5
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 4316.2
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 4271.1
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 4270.4
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 4214.5
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 4214.1
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 4210.5
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 4182.9
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 4168.1
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 4154.9
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 4141.4
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 4141.0
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 4122.5
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 4121.9
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 4114.8
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 4101.2
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 4078.6
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 4068.4
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 4053.7
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 4044.0
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 4041.6
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 4016.9
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 4010.9
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 4002.5
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 3999.7
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 3997.8
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 3988.0
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 3962.2
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 3960.9
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 3950.4
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 3942.9
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 3921.5
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 3902.5
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 3902.1
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 3895.8
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 3883.8
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 3874.4
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 3873.5
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 3865.0
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 3823.7
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 3780.1
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 3765.2
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 3755.6
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 3754.2
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 3733.4
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 3713.7
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 3712.7
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 3709.8
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 3682.8
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 3678.1
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 3646.7
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 3640.7
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 3631.5
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 3624.9
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 3611.7
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 3605.7
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 3600.8
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 3597.4
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 3589.1
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 3588.9
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 3587.9
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 3577.9
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 3577.5
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 3567.4
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 3564.8
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 3558.7
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 3557.9
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 3553.0
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 3534.0
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 3525.9
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 3509.1
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 3496.4
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 3490.9
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 3489.5
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 3472.4
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 3448.8
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 3419.7
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 3418.9
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 3410.2
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 3370.9
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 3357.6
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 3350.1
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 3348.8
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 3345.6
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 3327.8
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 3316.9
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 3303.8
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 3299.6
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 3289.5
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 3277.5
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 3271.9
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 3260.2
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 3254.6
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 3224.9
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 3224.7
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 3217.3
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 3207.1
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 3201.5
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 3180.6
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 3161.8
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 3153.8
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 3148.7
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 3142.4
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 3131.8
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 3120.5
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 3111.0
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 3095.3
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 3093.6
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 3092.7
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 3080.9
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 3076.6
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 3058.2
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 3047.8
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 3034.3
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 3028.8
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 3015.8
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 3009.5
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 2954.4
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 2947.0
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 2934.4
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 2931.3
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 2912.7
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 2907.4
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 2900.3
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 2897.0
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 2881.2
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 2864.6
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 2858.1
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 2855.0
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 2852.3
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 2851.8
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 2846.3
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 2829.1
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 2824.1
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 2823.7
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 2811.0
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 2796.1
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 2781.2
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 2768.0
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 2754.2
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 2753.1
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 2753.1
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 2745.7
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 2739.5
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 2714.9
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 2704.7
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 2691.3
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 2687.5
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 2680.4
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 2650.9
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 2640.6
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 2628.8
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 2604.0
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 2583.7
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 2579.4
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 2561.9
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 2558.9
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 2539.3
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 2531.1
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 2531.0
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 2529.4
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 2506.9
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 2488.8
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 2448.1
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 2445.6
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 2439.8
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 2436.2
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 2428.4
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 2418.5
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 2417.3
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 2415.5
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 2409.8
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 2407.6
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 2399.4
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 2381.8
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 2378.3
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 2366.3
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 2337.3
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 2317.8
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 2275.6
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 2275.3
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 2275.2
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 2241.4
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 2229.6
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 2185.2
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 2177.2
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 2172.4
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 2158.9
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 2155.0
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 2154.3
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 2125.6
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 2083.2
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 2061.3
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 2059.3
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 2033.1
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 2000.7
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 1998.5
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 1949.3
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 1914.1
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 1908.9
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 1908.1
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 1907.5
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 1902.1
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 1892.7
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 1871.3
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 1865.3
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 1828.6
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 1813.5
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 1789.4
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 1788.0
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 1780.1
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 1776.2
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 1756.5
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 1724.0
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 1722.5
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 1716.9
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 1682.6
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 1664.7
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 1645.3
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 1603.9
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 1572.2
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 1572.1
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 1554.4
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 1552.5
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 1543.6
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 1515.2
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 1512.9
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 1506.5
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 1491.5
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 1487.9
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 1459.8
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 1449.6
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 1441.4
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 1383.9
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 1335.3
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 1325.3
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 1313.4
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 1290.6
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 1286.7
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 1249.0
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 1216.0
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 1202.2
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 1153.2
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 1126.6
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 1120.0
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 1045.3
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 1035.5
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 1009.2
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 992.3
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 979.9
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 962.0
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 952.2
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 950.5
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 815.0
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 797.5
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 769.4
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 767.0
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 682.9
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 615.2
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 593.1
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 551.9
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 529.5
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 528.6
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 528.5
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 520.4
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 480.4
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 455.3
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 337.9
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 289.2
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 152.1
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 133.6
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 81.2
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 70.8
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-CYB is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 5927.75
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 5256.0
Number of samples 105
Samples
Sample Description pTPM
L728 77 years, male, stage:Stage IIB, dead, 1128 days 14632.6
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 12158.6
L493 56 years, female, stage:Stage IIB, alive, 2945 days 11750.3
L596 74 years, female, stage:Stage IA, alive, 2319 days 10943.2
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 9855.6
L872 71 years, female, stage:Stage IA, alive, 1793 days 9720.3
L630 65 years, female, stage:Stage IA, dead, 1733 days 9254.6
L566 58 years, male, stage:Stage IB, alive, 2489 days 9233.5
L749 49 years, female, stage:Stage IIIA, dead, 189 days 9047.3
L778 65 years, female, stage:Stage IA, alive, 1600 days 8694.5
L656 58 years, male, stage:Stage IA, alive, 2227 days 8274.3
L850 77 years, male, stage:Stage IIIA, dead, 997 days 8040.0
L695 68 years, female, stage:Stage IB, dead, 1762 days 8035.4
L606 55 years, male, stage:Stage IA, alive, 2336 days 7804.8
L504 65 years, female, stage:Stage IA, dead, 1295 days 7737.9
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 7687.6
L532 69 years, female, stage:Stage IA, dead, 301 days 7625.1
L782 73 years, female, stage:Stage IIB, alive, 3371 days 7565.8
L455 52 years, female, stage:Stage IA, alive, 3315 days 7446.3
L738 74 years, female, stage:Stage IB, dead, 1314 days 7330.3
L439 80 years, male, stage:Stage IIB, dead, 2773 days 7180.7
L613 72 years, male, stage:Stage IIIA, dead, 19 days 6922.4
L879 75 years, male, stage:Stage IV, dead, 873 days 6683.5
L626 76 years, female, stage:Stage IA, dead, 1994 days 6653.4
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 6580.5
L605 74 years, female, stage:Stage IA, alive, 2460 days 6443.0
L413 72 years, female, stage:Stage IIIA, dead, 313 days 6360.3
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 6214.7
L561 62 years, female, stage:Stage IA, alive, 2543 days 6142.0
L638 65 years, male, stage:Stage IA, alive, 2076 days 5967.0
L875 69 years, female, stage:Stage IA, alive, 1675 days 5927.9
L890 56 years, female, stage:Stage IIB, dead, 1264 days 5927.6
L816 73 years, female, stage:Stage IIA, dead, 353 days 5877.2
L826 45 years, female, stage:Stage IV, dead, 935 days 5825.7
L607 59 years, male, stage:Stage IB, alive, 2572 days 5815.4
L602 69 years, female, stage:Stage IA, alive, 2277 days 5739.5
L541 70 years, female, stage:Stage IIIA, dead, 915 days 5738.2
L531 74 years, male, stage:Stage IB, dead, 928 days 5643.8
L673 74 years, female, stage:Stage IA, dead, 568 days 5583.0
L710 72 years, female, stage:Stage IIA, alive, 1775 days 5582.9
L678 65 years, female, stage:Stage IB, dead, 1114 days 5535.0
L851 70 years, male, stage:Stage IB, dead, 1315 days 5462.3
L773 64 years, female, stage:Stage IV, dead, 311 days 5413.2
L662 66 years, male, stage:Stage IA, dead, 865 days 5278.7
L593 78 years, male, stage:Stage IA, dead, 2436 days 5272.6
L569 76 years, female, stage:Stage IA, alive, 2531 days 5213.4
L802 62 years, female, stage:Stage IA, dead, 773 days 5103.7
L551 62 years, male, stage:Stage IA, alive, 2924 days 5073.7
L800 66 years, female, stage:Stage IA, dead, 2417 days 5058.0
L725 64 years, female, stage:Stage IA, alive, 1830 days 4981.8
L731 59 years, female, stage:Stage IA, dead, 964 days 4948.8
L827 70 years, male, stage:Stage IIB, dead, 1105 days 4947.2
L400 78 years, male, stage:Stage IIA, dead, 1233 days 4892.9
L885 62 years, female, stage:Stage IA, alive, 1618 days 4811.9
L871 74 years, male, stage:Stage IB, dead, 873 days 4793.9
L768 60 years, male, stage:Stage IIIA, dead, 472 days 4778.6
L877 70 years, female, stage:Stage IA, alive, 1599 days 4768.6
L832 65 years, female, stage:Stage IA, alive, 2145 days 4765.2
L599 80 years, male, stage:Stage IB, dead, 2083 days 4736.9
L831 62 years, female, stage:Stage IB, alive, 2152 days 4735.9
L865 75 years, female, stage:Stage IIB, alive, 1927 days 4717.1
L530 76 years, female, stage:Stage IIA, dead, 308 days 4664.7
L873 62 years, female, stage:Stage IA, alive, 1740 days 4636.0
L543 65 years, male, stage:Stage IA, alive, 2711 days 4493.3
L746 64 years, female, stage:Stage IIIA, dead, 594 days 4469.1
L689 69 years, male, stage:Stage IA, alive, 1943 days 4454.6
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 4368.6
L546 57 years, male, stage:Stage IA, dead, 973 days 4341.2
L446 71 years, female, stage:Stage IIB, dead, 415 days 4268.9
L458 76 years, female, stage:Stage IA, dead, 223 days 4214.9
L663 62 years, female, stage:Stage IB, alive, 2018 days 4212.0
L867 62 years, female, stage:Stage IIIA, dead, 317 days 4198.7
L829 76 years, male, stage:Stage IA, alive, 2173 days 4181.5
L585 70 years, female, stage:Stage IIA, dead, 402 days 4128.4
L766 59 years, male, stage:Stage IB, alive, 1793 days 4108.6
L810 64 years, female, stage:Stage IIIA, dead, 625 days 3981.5
L887 77 years, male, stage:Stage IA, dead, 374 days 3953.6
L683 77 years, female, stage:Stage IIA, dead, 612 days 3872.3
L601 75 years, male, stage:Stage IB, dead, 2068 days 3856.7
L791 66 years, female, stage:Stage IIIA, dead, 368 days 3816.6
L565 59 years, female, stage:Stage IB, dead, 543 days 3628.2
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 3561.8
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 3440.2
L735 75 years, female, stage:Stage IA, alive, 1830 days 3340.7
L880 75 years, female, stage:Stage IA, alive, 1767 days 3308.5
L440 80 years, male, stage:Stage IIB, dead, 651 days 3197.6
L616 54 years, male, stage:Stage IA, dead, 410 days 2899.3
L620 70 years, female, stage:Stage IIIA, dead, 338 days 2780.2
L617 68 years, male, stage:Stage IIIA, dead, 238 days 2764.3
L462 67 years, male, stage:Stage IIIA, dead, 568 days 2712.5
L838 71 years, female, stage:Stage IA, dead, 1005 days 2634.3
L828 68 years, female, stage:Stage IIB, alive, 2222 days 2546.3
L404 74 years, female, stage:Stage IIA, dead, 2318 days 2522.7
L484 64 years, female, stage:Stage IA, alive, 2895 days 2464.4
L842 62 years, female, stage:Stage IB, alive, 2005 days 2433.5
L557 81 years, female, stage:Stage IB, alive, 2580 days 2275.2
L703 71 years, male, stage:Stage IIA, dead, 1137 days 2169.7
L682 64 years, female, stage:Stage IIB, dead, 840 days 2070.1
L808 48 years, female, stage:Stage IA, alive, 3001 days 1816.7
L545 60 years, female, stage:Stage IA, alive, 2874 days 1780.9
L603 70 years, female, stage:Stage IB, dead, 972 days 1617.5
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 1535.6
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 1493.7
L688 57 years, male, stage:Stage IIIA, dead, 789 days 1011.9
L473 66 years, female, stage:Stage IA, alive, 3021 days 719.9
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-CYB is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 2582.38
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3518.9
Number of samples 489
Samples
Sample Description pTPM
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 17357.9
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 16812.8
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 13483.9
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 12170.4
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 11800.3
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 11455.5
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 11186.2
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 10716.2
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 10667.5
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 10592.9
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 10223.1
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 9299.5
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 9245.0
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 8844.9
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 8801.5
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 8619.7
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 8592.1
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 7881.2
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 7809.9
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 7786.4
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 7768.5
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 7732.4
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 7673.2
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 7458.8
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 7437.9
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 7418.2
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 7406.9
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 7377.6
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 7276.0
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 7243.5
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 7142.5
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 7100.8
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 6995.2
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 6991.5
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 6977.9
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 6958.2
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 6918.0
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 6733.2
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 6727.9
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 6710.5
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 6682.2
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 6680.8
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 6611.9
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 6606.3
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 6422.4
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 6418.1
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 6395.8
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 6383.6
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 6362.3
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 6289.0
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 6233.7
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 6229.8
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 6206.4
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 6171.6
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 6117.6
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 6074.8
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 6072.1
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 6067.9
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 6036.1
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 5994.7
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 5922.4
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 5905.6
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 5868.7
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 5846.8
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 5824.3
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 5800.1
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 5734.3
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 5731.3
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 5716.5
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 5659.9
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 5517.3
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 5506.8
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 5472.0
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 5446.8
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 5391.4
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 5386.5
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 5359.1
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 5320.5
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 5292.6
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 5204.7
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 5199.6
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 5197.6
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 5189.1
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 5184.8
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 5184.3
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 5179.7
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 5163.3
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 5125.4
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 5123.8
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 5072.6
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 5044.0
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 5036.7
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 5022.2
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 5009.7
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 4949.4
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 4939.3
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 4919.3
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 4894.2
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 4890.3
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 4873.6
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 4812.9
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 4807.2
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 4777.0
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 4768.9
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 4765.5
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 4761.8
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 4755.9
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 4739.6
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 4736.8
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 4709.0
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 4694.8
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 4686.5
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 4668.9
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 4666.7
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 4659.5
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 4659.0
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 4639.5
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 4624.8
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 4583.5
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 4552.6
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 4508.7
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 4500.5
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 4475.2
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 4461.4
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 4442.3
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 4424.3
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 4328.9
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 4322.4
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 4294.4
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 4277.7
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 4214.1
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 4206.4
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 4195.7
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 4183.1
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 4180.9
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 4160.6
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 4144.9
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 4144.7
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 4127.7
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 4119.2
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 4115.2
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 4110.1
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 4108.8
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 4107.0
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 4101.6
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 4099.2
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 4064.3
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 4039.9
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 4039.4
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 4024.1
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 4015.8
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 4011.2
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 4000.2
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 3964.5
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 3956.5
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 3934.7
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 3917.5
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 3916.4
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 3906.2
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 3901.4
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 3899.7
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 3886.9
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 3877.9
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 3838.3
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 3831.7
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 3825.8
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 3813.4
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 3807.4
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 3796.7
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 3785.2
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 3780.8
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 3778.6
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 3748.6
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 3748.1
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 3729.4
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 3719.2
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 3718.8
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 3700.2
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 3653.7
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 3653.5
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 3605.0
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 3602.0
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 3580.3
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 3580.2
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 3569.5
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 3555.9
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 3553.7
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 3547.5
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 3542.5
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 3540.0
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 3531.4
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 3464.9
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 3456.6
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 3453.0
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 3452.2
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 3431.4
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 3430.8
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 3424.1
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 3423.1
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 3393.1
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 3386.0
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 3378.4
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 3369.8
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 3368.7
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 3367.7
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 3366.6
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 3366.1
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 3339.8
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 3310.1
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 3304.1
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 3300.6
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 3292.6
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 3287.3
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 3258.6
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 3253.5
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 3243.0
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 3239.0
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 3238.7
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 3220.5
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 3207.4
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 3206.9
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 3188.4
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 3186.7
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 3186.1
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 3184.4
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 3178.2
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 3167.5
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 3156.7
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 3125.2
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 3121.9
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 3111.7
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 3106.3
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 3067.9
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 3058.8
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 3053.7
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 3050.1
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 3048.5
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 3036.5
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 3023.6
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 3013.6
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 3001.9
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 2995.7
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 2991.0
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 2987.3
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 2981.9
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 2971.3
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 2961.0
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 2959.0
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 2952.7
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 2942.0
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 2934.7
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 2933.3
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 2924.7
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 2908.1
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 2900.9
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 2891.2
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 2887.3
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 2867.3
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 2865.8
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 2865.5
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 2849.0
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 2838.6
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 2826.5
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 2814.2
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 2794.1
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 2793.0
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 2790.3
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 2785.3
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 2782.1
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 2775.2
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 2754.5
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 2749.8
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 2735.6
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 2722.7
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 2721.8
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 2719.6
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 2718.5
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 2710.8
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 2707.5
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 2699.4
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 2690.7
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 2689.0
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 2687.0
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 2652.5
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 2648.6
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 2632.2
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 2627.6
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 2610.1
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 2591.7
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 2588.7
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 2582.4
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 2580.7
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 2543.4
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 2525.6
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 2524.7
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 2522.0
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 2519.5
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 2507.7
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 2503.1
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 2501.1
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 2501.0
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 2500.7
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 2497.4
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 2495.4
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 2489.2
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 2476.5
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 2461.5
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 2452.1
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 2440.5
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 2429.8
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 2420.9
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 2419.1
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 2416.8
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 2416.2
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 2410.3
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 2408.1
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 2403.3
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 2401.7
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 2396.1
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 2390.9
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 2386.5
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 2375.6
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 2373.7
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 2362.0
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 2358.4
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 2357.8
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 2353.4
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 2329.3
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 2328.8
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 2327.2
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 2320.5
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 2295.4
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 2281.2
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 2275.8
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 2274.1
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 2268.4
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 2266.7
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 2263.6
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 2259.4
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 2242.5
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 2238.5
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 2238.1
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 2212.8
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 2207.8
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 2205.3
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 2202.9
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 2199.6
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 2194.2
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 2187.5
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 2174.7
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 2168.9
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 2160.3
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 2154.6
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 2137.9
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 2096.0
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 2089.1
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 2075.8
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 2056.2
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 2046.0
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 2035.4
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 2025.6
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 2023.6
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 2017.6
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 2008.4
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 1993.4
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 1987.8
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 1976.1
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 1972.6
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 1966.8
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 1960.7
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 1949.7
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 1943.2
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 1942.8
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 1942.3
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 1929.2
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 1921.1
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 1907.6
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 1901.2
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 1896.7
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 1886.9
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 1874.4
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 1866.3
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 1861.8
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 1859.8
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 1852.2
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 1837.1
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 1834.4
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 1829.4
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 1817.2
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 1813.6
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 1807.8
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 1798.8
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 1795.0
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 1784.8
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 1780.4
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 1738.0
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 1737.9
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 1732.1
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 1723.6
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 1716.0
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 1707.0
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 1696.9
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 1696.1
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 1690.9
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 1661.8
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 1655.0
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 1632.0
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 1621.7
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 1608.6
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 1596.5
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 1584.3
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 1583.9
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 1571.6
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 1567.2
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 1561.1
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 1541.1
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 1540.1
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 1528.3
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 1525.5
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 1519.0
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 1517.9
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 1516.3
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 1504.0
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 1491.9
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 1491.2
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 1481.4
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 1474.3
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 1468.9
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 1467.9
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 1466.6
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 1463.9
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 1444.3
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 1443.6
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 1431.7
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 1415.0
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 1410.8
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 1408.0
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 1396.5
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 1372.2
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 1338.6
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 1331.1
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 1321.0
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 1300.6
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 1296.1
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 1288.5
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 1288.1
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 1261.7
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 1251.7
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 1240.4
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 1212.4
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 1192.3
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 1178.0
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 1178.0
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 1169.9
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 1157.5
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 1142.0
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 1140.9
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 1138.6
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 1107.3
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 1093.3
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 1092.3
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 1082.2
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 1072.1
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 1064.7
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 1059.8
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 1044.2
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 1022.2
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 1019.6
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 1012.9
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 998.8
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 996.4
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 996.3
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 977.7
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 973.9
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 966.4
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 947.9
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 921.4
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 920.1
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 862.2
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 853.6
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 714.2
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 703.0
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 648.9
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 635.2
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 620.6
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 580.0
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 576.6
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 544.9
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 533.6
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-CYB is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4495.22
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 3875.3
Number of samples 68
Samples
Sample Description pTPM
L854 62 years, female, stage:Stage IB, alive, 2256 days 8692.8
L490 58 years, male, stage:Stage IA, dead, 716 days 7805.8
L472 71 years, male, stage:Stage IB, dead, 423 days 7710.3
L884 71 years, male, stage:Stage IIA, alive, 1627 days 7635.9
L655 62 years, male, stage:Stage IIA, dead, 1603 days 7245.3
L534 66 years, male, stage:Stage IIA, alive, 2693 days 6672.3
L744 75 years, male, stage:Stage IA, alive, 1614 days 5972.1
L459 75 years, male, stage:Stage IIA, alive, 3181 days 5779.3
L881 70 years, male, stage:Stage IB, alive, 1752 days 5552.4
L633 77 years, female, stage:Stage IA, alive, 2102 days 5277.0
L447 67 years, male, stage:Stage IIB, alive, 3203 days 5273.0
L592 61 years, male, stage:Stage IB, alive, 2368 days 5240.3
L758 84 years, male, stage:Stage IA, dead, 1562 days 5238.5
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 5055.0
L736 67 years, male, stage:Stage IA, dead, 1195 days 4799.5
L466 65 years, female, stage:Stage IIIA, dead, 412 days 4715.5
L468 53 years, male, stage:Stage IB, alive, 3004 days 4655.9
L658 65 years, female, stage:Stage IIB, alive, 2083 days 4539.4
L719 63 years, male, stage:Stage IB, alive, 1615 days 4507.4
L483 65 years, male, stage:Stage IB, dead, 77 days 4483.0
L858 69 years, female, stage:Stage IIB, dead, 558 days 4432.0
L568 77 years, female, stage:Stage IIB, dead, 71 days 4324.7
L420 57 years, female, stage:Stage IIB, dead, 295 days 4281.5
L747 74 years, female, stage:Stage IA, dead, 1112 days 4269.0
L444 74 years, female, stage:Stage IIB, alive, 3337 days 4262.8
L586 67 years, male, stage:Stage IIA, dead, 784 days 4256.2
L559 72 years, male, stage:Stage IIB, alive, 2615 days 4237.4
L529 79 years, female, stage:Stage IA, alive, 2775 days 4151.4
L642 67 years, male, stage:Stage IB, dead, 1167 days 4135.9
L442 75 years, female, stage:Stage IB, dead, 2433 days 4061.7
L755 82 years, male, stage:Stage IIA, dead, 227 days 4039.2
L864 66 years, female, stage:Stage IA, alive, 2192 days 3915.7
L767 67 years, male, stage:Stage IA, alive, 1718 days 3735.7
L715 69 years, female, stage:Stage IIIA, dead, 150 days 3668.7
L760 80 years, male, stage:Stage IIA, alive, 1895 days 3634.8
L650 69 years, female, stage:Stage IB, dead, 986 days 3561.6
L457 46 years, female, stage:Stage IIA, alive, 2901 days 3517.0
L572 58 years, male, stage:Stage IA, alive, 2532 days 3470.4
L712 61 years, male, stage:Stage IA, alive, 1698 days 3456.5
L488 61 years, female, stage:Stage IIA, alive, 2993 days 3407.9
L723 67 years, male, stage:Stage IIA, dead, 433 days 3358.5
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 3246.1
L788 54 years, female, stage:Stage IA, alive, 3385 days 3191.2
L406 64 years, male, stage:Stage IA, alive, 3057 days 3030.1
L604 67 years, male, stage:Stage IIA, dead, 286 days 2958.3
L652 82 years, male, stage:Stage IA, dead, 5 days 2909.8
L456 48 years, male, stage:Stage IIA, dead, 1660 days 2837.7
L818 67 years, male, stage:Stage IB, alive, 2480 days 2832.6
L824 70 years, male, stage:Stage IA, dead, 665 days 2805.9
L685 71 years, female, stage:Stage IIB, alive, 1944 days 2595.1
L739 49 years, female, stage:Stage IIIA, dead, 352 days 2585.4
L886 71 years, male, stage:Stage IB, dead, 1932 days 2547.0
L856 69 years, male, stage:Stage IA, dead, 1465 days 2507.8
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 2471.3
L860 77 years, male, stage:Stage IA, alive, 2056 days 2420.5
L852 64 years, male, stage:Stage IB, dead, 700 days 2418.6
L661 66 years, male, stage:Stage IA, dead, 1123 days 2385.6
L756 72 years, male, stage:Stage IB, alive, 1796 days 2345.8
L496 77 years, male, stage:Stage IB, alive, 2761 days 2163.2
L563 61 years, female, stage:Stage IIB, dead, 1216 days 2131.0
L753 61 years, male, stage:Stage IIA, alive, 1705 days 2084.9
L820 73 years, female, stage:Stage IA, alive, 2405 days 2048.7
L464 66 years, male, stage:Stage IB, dead, 1935 days 2021.3
L470 78 years, female, stage:Stage IB, dead, 1774 days 1921.5
L644 67 years, male, stage:Stage IA, dead, 282 days 1818.4
L608 73 years, male, stage:Stage IA, alive, 2350 days 1724.3
L539 78 years, male, stage:Stage IB, dead, 370 days 1290.6
L857 69 years, male, stage:Stage IB, dead, 226 days 1200.6
Show allShow less
LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0000920017 Tumor N/A
CPT0000930003 Normal N/A
CPT0001060010 Tumor N/A
CPT0001070003 Normal N/A
CPT0001380003 Tumor N/A
CPT0001390003 Normal N/A
CPT0001580009 Tumor N/A
CPT0001590003 Normal N/A
CPT0001660013 Tumor N/A
CPT0001690003 Normal N/A
CPT0001800013 Tumor N/A
CPT0001810003 Normal N/A
CPT0001960003 Tumor N/A
CPT0001970003 Normal N/A
CPT0008410003 Tumor N/A
CPT0008420003 Normal N/A
CPT0008450003 Tumor N/A
CPT0011710004 Tumor N/A
CPT0011750003 Normal N/A
CPT0011910004 Tumor N/A
CPT0011930003 Normal N/A
CPT0013600003 Tumor N/A
CPT0013630003 Normal N/A
CPT0013880003 Tumor N/A
CPT0013910003 Normal N/A
CPT0014260003 Tumor N/A
CPT0014290003 Normal N/A
CPT0014860003 Tumor N/A
CPT0014930003 Normal N/A
CPT0015410003 Tumor N/A
CPT0015420003 Normal N/A
CPT0021450003 Tumor N/A
CPT0021490003 Normal N/A
CPT0023310003 Tumor N/A
CPT0023320003 Normal N/A
CPT0051690004 Tumor N/A
CPT0052170004 Tumor N/A
CPT0052940004 Tumor N/A
CPT0053040004 Tumor N/A
CPT0055100004 Tumor N/A
CPT0062810003 Normal N/A
CPT0063730003 Tumor N/A
CPT0063750003 Normal N/A
CPT0063810003 Tumor N/A
CPT0063840003 Normal N/A
CPT0066780003 Tumor N/A
CPT0066810003 Normal N/A
CPT0066890003 Tumor N/A
CPT0066930003 Normal N/A
CPT0067070003 Tumor N/A
CPT0067110003 Normal N/A
CPT0067250003 Tumor N/A
CPT0067290003 Normal N/A
CPT0067450003 Tumor N/A
CPT0067470004 Normal N/A
CPT0067620003 Tumor N/A
CPT0067770003 Normal N/A
CPT0067940003 Tumor N/A
CPT0067950003 Normal N/A
CPT0068100003 Tumor N/A
CPT0068130003 Normal N/A
CPT0068610003 Tumor N/A
CPT0068650003 Normal N/A
CPT0068800003 Tumor N/A
CPT0068830003 Normal N/A
CPT0069360003 Tumor N/A
CPT0069370003 Normal N/A
CPT0069520003 Tumor N/A
CPT0069550003 Normal N/A
CPT0069700003 Tumor N/A
CPT0069720003 Normal N/A
CPT0070060003 Tumor N/A
CPT0070080003 Normal N/A
CPT0079830003 Tumor N/A
CPT0079850003 Normal N/A
CPT0082740004 Tumor N/A
CPT0082770003 Normal N/A
CPT0082850004 Tumor N/A
CPT0082890003 Normal N/A
CPT0083100003 Tumor N/A
CPT0083140003 Normal N/A
CPT0083390004 Tumor N/A
CPT0083420003 Normal N/A
CPT0083780003 Tumor N/A
CPT0083810003 Normal N/A
CPT0084140003 Tumor N/A
CPT0084170003 Normal N/A
CPT0086310003 Tumor N/A
CPT0086320003 Normal N/A
CPT0086750003 Tumor N/A
CPT0086770003 Normal N/A
CPT0089340003 Tumor N/A
CPT0089360003 Normal N/A
CPT0090170004 Tumor N/A
CPT0090200003 Normal N/A
CPT0090340003 Tumor N/A
CPT0090370003 Normal N/A
CPT0090570004 Tumor N/A
CPT0090600003 Normal N/A
CPT0090700003 Tumor N/A
CPT0090720003 Normal N/A
CPT0090860003 Tumor N/A
CPT0090900004 Normal N/A
CPT0091240003 Tumor N/A
CPT0091260003 Normal N/A
CPT0091860003 Tumor N/A
CPT0091870003 Normal N/A
CPT0092240003 Tumor N/A
CPT0092250003 Normal N/A
CPT0092530003 Tumor N/A
CPT0092930003 Tumor N/A
CPT0092940003 Normal N/A
CPT0097580003 Tumor N/A
CPT0097600003 Normal N/A
CPT0098130003 Tumor N/A
CPT0102450003 Tumor N/A
CPT0102480003 Normal N/A
CPT0104630003 Tumor N/A
CPT0104650003 Normal N/A
CPT0104750003 Tumor N/A
CPT0104760003 Normal N/A
CPT0104970003 Tumor N/A
CPT0105010004 Normal N/A
CPT0105060003 Tumor N/A
CPT0105190003 Normal N/A
CPT0105230003 Tumor N/A
CPT0105250003 Normal N/A
CPT0105270003 Tumor N/A
CPT0105330003 Tumor N/A
CPT0105370004 Normal N/A
CPT0105510003 Tumor N/A
CPT0105550003 Normal N/A
CPT0105600003 Tumor N/A
CPT0105610003 Normal N/A
CPT0105630003 Tumor N/A
CPT0105680003 Normal N/A
CPT0105710003 Tumor N/A
CPT0105740003 Normal N/A
CPT0105940003 Tumor N/A
CPT0105980003 Normal N/A
CPT0106100003 Normal N/A
CPT0106110003 Tumor N/A
CPT0109680004 Tumor N/A
CPT0109700003 Normal N/A
CPT0109710003 Normal N/A
CPT0109720004 Tumor N/A
CPT0109740004 Tumor N/A
CPT0109760003 Normal N/A
CPT0109830004 Tumor N/A
CPT0109850003 Normal N/A
CPT0110860004 Tumor N/A
CPT0110890003 Normal N/A
CPT0110980004 Tumor N/A
CPT0111300003 Tumor N/A
CPT0111480003 Normal N/A
CPT0111590003 Normal N/A
CPT0112060003 Tumor N/A
CPT0112080003 Normal N/A
CPT0113210003 Tumor N/A
CPT0113220003 Normal N/A
CPT0113990003 Tumor N/A
CPT0114010003 Normal N/A
CPT0114660004 Tumor N/A
CPT0114690003 Normal N/A
CPT0114840003 Tumor N/A
CPT0114880003 Normal N/A
CPT0115070003 Tumor N/A
CPT0115090003 Normal N/A
CPT0117970003 Tumor N/A
CPT0118010003 Normal N/A
CPT0118160003 Tumor N/A
CPT0118180003 Normal N/A
CPT0118200003 Tumor N/A
CPT0118240003 Normal N/A
CPT0118340003 Tumor N/A
CPT0118360003 Normal N/A
CPT0118570003 Tumor N/A
CPT0118600003 Normal N/A
CPT0118620003 Tumor N/A
CPT0118650003 Normal N/A
CPT0118810003 Tumor N/A
CPT0118830003 Normal N/A
CPT0118880003 Tumor N/A
CPT0118890003 Normal N/A
CPT0125810003 Tumor N/A
CPT0125830003 Normal N/A
CPT0146580004 Tumor N/A
CPT0146600003 Normal N/A
CPT0146680004 Tumor N/A
CPT0146700003 Normal N/A
CPT0146780004 Tumor N/A
CPT0146800003 Normal N/A
CPT0146880004 Tumor N/A
CPT0146980004 Tumor N/A
CPT0147000003 Normal N/A
CPT0147080004 Tumor N/A
CPT0147100003 Normal N/A
CPT0147380004 Tumor N/A
CPT0147400003 Normal N/A
CPT0147480004 Tumor N/A
CPT0147500003 Normal N/A
CPT0147580004 Tumor N/A
CPT0147600003 Normal N/A
CPT0147880004 Tumor N/A
CPT0147900003 Normal N/A
CPT0147980004 Tumor N/A
CPT0148000003 Normal N/A
CPT0148080004 Tumor N/A
CPT0148100003 Normal N/A
CPT0148180004 Tumor N/A
CPT0148200003 Normal N/A
CPT0148280004 Tumor N/A
CPT0148300003 Normal N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0209510003 Normal N/A
CPT0001030003 Normal N/A
CPT0123370003 Normal N/A
CPT0175560003 Tumor N/A
CPT0218280003 Tumor N/A
CPT0126470003 Normal N/A
CPT0112660003 Normal N/A
CPT0237550004 Tumor N/A
CPT0245790003 Normal N/A
CPT0007740003 Tumor N/A
CPT0102840003 Normal N/A
CPT0233640003 Normal N/A
CPT0238130003 Normal N/A
CPT0221650003 Tumor N/A
CPT0083980003 Tumor N/A
CPT0130410003 Tumor N/A
CPT0112580003 Tumor N/A
CPT0241170003 Tumor N/A
CPT0086260003 Tumor N/A
CPT0064050003 Normal N/A
CPT0233330003 Normal N/A
CPT0079110003 Normal N/A
CPT0126400003 Normal N/A
CPT0104930003 Tumor N/A
CPT0105430003 Normal N/A
CPT0237200004 Tumor N/A
CPT0146400003 Normal N/A
CPT0063440003 Normal N/A
CPT0108560003 Tumor N/A
CPT0221220003 Normal N/A
CPT0079060003 Normal N/A
CPT0126830003 Normal N/A
CPT0208770003 Tumor N/A
CPT0232670003 Tumor N/A
CPT0222730003 Tumor N/A
CPT0209040003 Normal N/A
CPT0234930004 Tumor N/A
CPT0090440003 Tumor N/A
CPT0104380003 Normal N/A
CPT0202740003 Normal N/A
CPT0204600003 Tumor N/A
CPT0237080003 Normal N/A
CPT0183250004 Tumor N/A
CPT0175410003 Normal N/A
CPT0098770003 Tumor N/A
CPT0196810003 Tumor N/A
CPT0112540003 Tumor N/A
CPT0023470003 Tumor N/A
CPT0202530004 Tumor N/A
CPT0117770003 Normal N/A
CPT0245840003 Normal N/A
CPT0233600003 Tumor N/A
CPT0192540004 Tumor N/A
CPT0126740003 Tumor N/A
CPT0223820003 Normal N/A
CPT0197150003 Tumor N/A
CPT0227020003 Tumor N/A
CPT0197090003 Tumor N/A
CPT0197170003 Normal N/A
CPT0130440004 Normal N/A
CPT0146380004 Tumor N/A
CPT0245780003 Tumor N/A
CPT0091610003 Tumor N/A
CPT0175390003 Tumor N/A
CPT0010050003 Tumor N/A
CPT0136640003 Tumor N/A
CPT0111150004 Tumor N/A
CPT0234560003 Tumor N/A
CPT0204820003 Normal N/A
CPT0197860003 Normal N/A
CPT0098800003 Normal N/A
CPT0237990003 Normal N/A
CPT0068280003 Tumor N/A
CPT0108600003 Normal N/A
CPT0175160003 Normal N/A
CPT0091090003 Normal N/A
CPT0186180003 Tumor N/A
CPT0208780003 Normal N/A
CPT0105420003 Tumor N/A
CPT0079100003 Tumor N/A
CPT0225470003 Normal N/A
CPT0101130003 Tumor N/A
CPT0186210003 Normal N/A
CPT0079050003 Tumor N/A
CPT0233160003 Normal N/A
CPT0063430003 Tumor N/A
CPT0086270003 Normal N/A
CPT0089880003 Tumor N/A
CPT0219360003 Tumor N/A
CPT0202580004 Normal N/A
CPT0204660003 Normal N/A
CPT0146480004 Tumor N/A
CPT0237780003 Normal N/A
CPT0223790003 Tumor N/A
CPT0128890003 Tumor N/A
CPT0197380003 Normal N/A
CPT0069900003 Normal N/A
CPT0091820003 Tumor N/A
CPT0197480003 Tumor N/A
CPT0222740003 Normal N/A
CPT0126670003 Tumor N/A
CPT0146500003 Normal N/A
CPT0202220004 Normal N/A
CPT0175270003 Normal N/A
CPT0233120003 Tumor N/A
CPT0217420003 Tumor N/A
CPT0063480003 Tumor N/A
CPT0196820003 Normal N/A
CPT0091050003 Tumor N/A
CPT0126390003 Tumor N/A
CPT0186140003 Normal N/A
CPT0115860003 Normal N/A
CPT0007760003 Normal N/A
CPT0175120003 Tumor N/A
CPT0237410004 Tumor N/A
CPT0010060003 Normal N/A
CPT0232690003 Normal N/A
CPT0147180004 Tumor N/A
CPT0130270003 Tumor N/A
CPT0191750003 Normal N/A
CPT0238110004 Tumor N/A
CPT0183270003 Normal N/A
CPT0087210003 Normal N/A
CPT0237570003 Normal N/A
CPT0126450003 Tumor N/A
CPT0023500003 Normal N/A
CPT0104950003 Normal N/A
CPT0126810003 Tumor N/A
CPT0221200003 Tumor N/A
CPT0063500003 Normal N/A
CPT0197520003 Normal N/A
CPT0245890003 Normal N/A
CPT0128900003 Normal N/A
CPT0227400003 Tumor N/A
CPT0130070003 Normal N/A
CPT0209020004 Tumor N/A
CPT0069890003 Tumor N/A
CPT0191710003 Tumor N/A
CPT0117720003 Tumor N/A
CPT0126530003 Tumor N/A
CPT0190550003 Tumor N/A
CPT0123350003 Tumor N/A
CPT0091620003 Normal N/A
CPT0195510003 Tumor N/A
CPT0126760003 Normal N/A
CPT0197210003 Tumor N/A
CPT0130310003 Normal N/A
CPT0175260003 Tumor N/A
CPT0112600003 Normal N/A
CPT0218310003 Normal N/A
CPT0202040003 Normal N/A
CPT0234820003 Normal N/A
CPT0130030003 Tumor N/A
CPT0186130003 Tumor N/A
CPT0225380003 Tumor N/A
CPT0111000004 Normal N/A
CPT0202400004 Normal N/A
CPT0191860003 Tumor N/A
CPT0234950004 Normal N/A
CPT0001020003 Tumor N/A
CPT0237060004 Tumor N/A
CPT0202720003 Tumor N/A
CPT0209490003 Tumor N/A
CPT0104360003 Tumor N/A
CPT0187370003 Tumor N/A
CPT0112730003 Normal N/A
CPT0112650003 Tumor N/A
CPT0115830003 Tumor N/A
CPT0202350004 Tumor N/A
CPT0204990003 Tumor N/A
CPT0237210003 Normal N/A
CPT0204800003 Tumor N/A
CPT0202170003 Tumor N/A
CPT0205000003 Normal N/A
CPT0245880003 Tumor N/A
CPT0207210003 Tumor N/A
CPT0236420003 Tumor N/A
CPT0233320003 Tumor N/A
CPT0064040003 Tumor N/A
CPT0197100003 Normal N/A
CPT0207250003 Normal N/A
CPT0234580003 Normal N/A
CPT0227070003 Normal N/A
CPT0241210003 Normal N/A
CPT0087190003 Tumor N/A
CPT0147200003 Normal N/A
CPT0083990003 Normal N/A
CPT0192590004 Normal N/A
CPT0221660003 Normal N/A
CPT0237760003 Tumor N/A
CPT0202020008 Tumor N/A
CPT0237430003 Normal N/A
CPT0219390003 Normal N/A
CPT0068320003 Normal N/A
CPT0195520003 Normal N/A
CPT0187380003 Normal N/A
CPT0227420003 Normal N/A
CPT0102790003 Tumor N/A
CPT0197740003 Tumor N/A
CPT0237690004 Tumor N/A
CPT0245830003 Tumor N/A
CPT0147700003 Normal N/A
CPT0236430003 Normal N/A
CPT0191930003 Normal N/A
CPT0147680004 Tumor N/A
CPT0217490003 Normal N/A
CPT0112550003 Normal N/A
CPT0136660003 Normal N/A
CPT0237710003 Normal N/A
CPT0112720003 Tumor N/A
CPT0234790003 Tumor N/A
CPT0237970004 Tumor N/A
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA068400

Antibody CAB032215
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org