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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:77271.2 nTPM
HPA Brain:27011.8 nTPM
GTEx:77271.2 nTPM
Pig:21331.3 nTPM
Mouse:26418.4 nTPM
Allen mouse:22.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA068400Antibody CAB032215
Glial cells LowLow
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

27011.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 19124.6
2290 Female, age 72, unknown 33072.7
2846 Female, age 79, unknown 28951.3
2289 Male, age 61, right hemisphere 19160.5
1857 Female, age 85, left hemisphere 18561.3
2481 Female, age 94, left hemisphere 17012.1
1781 Male, age 74, unknown 12328.6
1854 Male, age 80, left hemisphere 12167.4
2288 Male, age 75, left hemisphere 11742.9
Globus pallidus, externus
nTPM: 18464.4
2646 Male, age 61, right hemisphere 42214.2
2567 Female, age 72, unknown 26345.9
1996 Male, age 80, right hemisphere 10288.1
2772 Female, age 79, unknown 6967.4
2395 Male, age 75, both hemispheres 6506.3
Globus pallidus, internus
nTPM: 12395.1
2566 Female, age 72, unknown 19381.9
2483 Female, age 94, right hemisphere 19051.1
1818 Male, age 74, unknown 14091.0
2037 Male, age 80, right hemisphere 9903.3
2111 Female, age 85, right hemisphere 9159.0
2287 Male, age 75, right hemisphere 8918.9
2778 Female, age 91, both hemispheres 6260.5
Nucleus accumbens
nTPM: 14368.7
2698 Female, age 72, unknown 32129.5
1783 Male, age 74, unknown 16161.3
2824 Male, age 61, right hemisphere 13543.4
1806 Female, age 85, left hemisphere 13384.1
1856 Female, age 91, right hemisphere 12379.7
2391 Female, age 94, left hemisphere 10843.0
2286 Male, age 75, left hemisphere 8802.9
2732 Male, age 80, right hemisphere 7705.7
Nucleus basalis of Meynert
nTPM: 27011.8
2569 Male, age 61, both hemispheres 55102.3
2484 Female, age 94, left hemisphere 21223.1
2821 Male, age 75, both hemispheres 16523.8
2393 Male, age 80, right hemisphere 15197.9
Nucleus of the diagonal band
nTPM: 9517.4
2195 Female, age 85, both hemispheres 14807.3
1979 Male, age 74, unknown 12876.3
2775 Male, age 80, right hemisphere 7708.6
2029 Male, age 61, right hemisphere 6197.0
1812 Female, age 91, both hemispheres 5998.0
Putamen
nTPM: 24203.3
2489 Female, age 72, unknown 57649.2
2647 Male, age 75, left hemisphere 27897.2
1829 Male, age 74, unknown 23703.3
2482 Female, age 94, left hemisphere 23160.6
1838 Male, age 80, right hemisphere 13838.0
2466 Female, age 79, unknown 12948.1
1937 Female, age 91, right hemisphere 10227.0
Septal nuclei
nTPM: 10494.8
2394 Male, age 61, left hemisphere 18396.9
2199 Male, age 80, right hemisphere 14452.8
2059 Female, age 85, both hemispheres 10546.2
1960 Male, age 74, unknown 10310.1
2629 Female, age 94, right hemisphere 9013.8
2031 Female, age 72, unknown 5392.3
2009 Female, age 91, both hemispheres 5351.2
Stria terminalis, bed nucleus
nTPM: 10108.3
2201 Male, age 74, unknown 16941.4
2486 Female, age 94, both hemispheres 7354.8
1974 Female, age 91, both hemispheres 6028.7

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77271.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 63191.0
Samples: 246

Max nTPM: 345366.1
Min nTPM: 11572.0
Std nTPM: 54445.7
Median nTPM: 45682.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 345366.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 326745.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 309211.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 279318.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 276735.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 258931.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 240179.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 214930.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 198495.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 197516.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 170616.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 166575.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 165778.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 160746.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 159544.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 157354.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 155415.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 150413.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 138157.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 136276.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 133719.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 131096.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 130442.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 125992.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 125238.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 124586.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 122841.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 116135.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 112911.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 112622.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 108889.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 106674.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 101944.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 101687.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 101570.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 101161.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 101000.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 100266.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 98671.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 97345.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 96988.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 96651.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 95681.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 92948.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 92777.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 91735.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 91253.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 90569.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 90397.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 88703.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 88043.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 85161.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 84046.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 83216.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 82235.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 80385.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 80066.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 77651.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 77049.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 76754.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 75920.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 74107.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 74003.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 73798.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 71371.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 70856.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 70414.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 70352.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 69169.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 68894.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 68464.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 68165.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 66607.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 65839.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 65542.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 63593.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 63224.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 61743.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 61716.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 60194.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 59138.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 58307.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 57245.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 57153.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 56903.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 56840.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 56532.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 56407.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 56179.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 55657.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 54788.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 54268.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 54127.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 53828.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 53636.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 53405.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 53301.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 52812.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 52665.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 52192.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 51408.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 51404.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 51139.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 51067.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 50262.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 50199.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 50147.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 50002.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 49845.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 49626.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 49556.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 49352.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 49181.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 48898.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 48824.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 48794.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 48760.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 47981.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 47805.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 47525.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 46835.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 45773.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 45746.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 45618.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 44506.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 43964.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 43673.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 43658.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 43043.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 42740.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 42417.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 42181.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 41765.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 41754.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 41649.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 41375.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 41024.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 40812.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 40193.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 40056.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 39899.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 39028.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 38744.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 38586.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 37964.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 37925.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 37649.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 37611.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 37520.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 37319.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 37158.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 36958.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 36619.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 36486.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 36373.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 36006.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 35932.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 35691.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35395.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 35330.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 34669.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 34628.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 34597.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 34554.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 34281.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 34094.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 34058.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 33799.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 33485.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 33301.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 33222.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 32543.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 32458.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 32339.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 31924.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 31856.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 31430.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 31264.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 31138.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 31052.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 30737.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 30689.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 30507.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 30491.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 30255.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 30113.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 29838.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 29539.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 29428.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 29314.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 29168.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 28903.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 28322.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 28240.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 28165.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 28037.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 27765.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 27613.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 27549.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 27388.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 27352.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 27248.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 27186.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 27053.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 27006.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 26907.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 26793.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 26609.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 26450.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 26355.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 26258.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 25988.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 25939.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 25537.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 25296.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 25260.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 25253.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 25087.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 24450.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 24434.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 24371.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 24278.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 24205.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 24172.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 23142.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 22927.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 22778.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 22749.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 21774.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 20859.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 20783.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 20619.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 20617.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 19855.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 19479.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 19315.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 19197.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 19040.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 18556.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 17738.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 17277.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 14788.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 13791.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 13512.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 12762.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 11572.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 59931.7
Samples: 246

Max nTPM: 421121.0
Min nTPM: 1017.9
Std nTPM: 60810.2
Median nTPM: 37355.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 421121.0
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 384248.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 287885.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 264726.4
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 247326.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 245728.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 238531.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 234858.4
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 224100.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 215331.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 209773.8
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 202651.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 197793.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 196321.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 189492.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 186747.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 182208.0
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 170847.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 151993.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 149672.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 149351.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 147343.5
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 139995.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 133380.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 133203.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 128191.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 124607.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 121043.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 120960.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 116910.6
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 115210.4
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 113407.8
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 110125.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 106207.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 103852.5
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 101761.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 101149.6
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 99545.4
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 98258.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 96230.9
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 95869.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 95155.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 91983.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 90842.9
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 90618.8
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 90126.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 87595.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 77682.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 76213.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 74725.4
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 70593.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 68444.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 68331.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 67400.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 67032.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 66782.3
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 66003.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 65925.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 65499.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 64199.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 64083.0
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 63177.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 62762.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 61239.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 61021.7
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 59032.4
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 57407.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 57174.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 56109.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 55847.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 55362.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 54373.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 54090.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 53278.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 52601.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 52371.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 52064.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 51350.7
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 51238.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 51065.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 50927.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 50406.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 50136.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 49983.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 49394.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 49272.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 48550.7
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 48421.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 48394.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 47975.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 47840.1
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 47791.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 47776.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 47746.2
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 46440.5
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 46409.8
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 46394.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 46010.8
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 45502.6
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 45010.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 44923.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 44774.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 44392.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 44311.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 44189.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 43816.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 43487.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 43387.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 42177.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 42105.5
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 41681.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 40774.1
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 40533.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 39969.4
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 39724.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 39381.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 38976.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 38872.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 38414.3
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 38016.5
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 37895.3
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 37513.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 37427.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 37283.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 36724.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 36548.1
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 36263.8
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 36169.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 36125.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 35880.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 35346.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 35167.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 35070.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 35044.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 34764.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 34690.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 34214.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 33787.3
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 33637.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 33629.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 33354.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 33239.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 33156.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 33094.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 33062.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 32792.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 32704.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 32436.7
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 32303.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 32275.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 32058.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 31829.7
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 31636.0
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 31480.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 31290.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 31260.4
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 31238.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 31136.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 31005.8
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 30779.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 30351.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 30309.1
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 30168.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 30115.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 30023.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 30015.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 30003.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 29965.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 29919.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 29707.5
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 29028.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 28838.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 28776.9
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 28266.2
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 28005.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 27869.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 27821.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 27791.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 27634.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 27584.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 27567.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 27450.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 27024.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 27003.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 26926.3
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 26680.1
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 26557.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 26527.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 26284.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 26228.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 25951.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 25536.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 25424.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 25383.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 25190.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 25030.0
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 25008.4
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 24757.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 24687.6
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 24314.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 24199.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 24171.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 23994.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 23887.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 23708.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 23624.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 23413.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 23282.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 23061.1
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 23001.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 22739.8
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 22530.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 22307.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 22240.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 21680.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 21467.4
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 21358.3
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 20782.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 20539.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 20231.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 20096.5
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 19837.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 19830.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 19655.5
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 19400.3
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 18704.3
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 18501.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 18339.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 18007.9
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 17966.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 17824.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 17540.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 17357.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 17166.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 16164.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 15729.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 15629.6
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 15509.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 15369.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 15016.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 13963.7
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 13828.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 12383.5
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 10217.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 5790.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 1017.9
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Brain - Putamen (basal ganglia)
Average nTPM: 77271.2
Samples: 205

Max nTPM: 328493.9
Min nTPM: 12779.4
Std nTPM: 58303.2
Median nTPM: 59704.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 328493.9
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 323754.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 318468.6
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 265545.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 256696.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 254698.5
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 229256.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 221893.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 215389.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 198918.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 194669.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 192044.3
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 178567.3
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 174837.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 174504.9
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 173304.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 172977.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 162998.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 162183.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 160367.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 156593.4
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 152805.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 149093.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 148289.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 144417.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 137836.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 136968.0
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 136859.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 135233.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 131256.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 130418.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 124581.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 124488.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 121353.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 118725.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 117906.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 117336.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 113171.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 112075.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 109978.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 108075.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 106553.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 106495.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 101378.1
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 100292.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 98372.7
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 95685.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 91709.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 91512.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 91128.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 90710.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 89664.7
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 89616.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 89544.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 89000.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 87782.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 87729.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 86850.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 86677.8
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 85680.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 85355.6
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 84817.2
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 84521.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 83788.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 83136.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 82346.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 82183.8
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 81273.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 80097.2
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 78058.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 77766.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 77556.7
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 75652.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 75314.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 74845.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 74341.3
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 72556.9
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 72393.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 70920.5
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 70363.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 69852.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 69278.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 68027.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 67878.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 67006.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 66897.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 66799.6
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 66097.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 65199.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 65078.5
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 64820.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 64443.3
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 64208.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 63773.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 63335.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 63279.9
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 62547.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 60842.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 60635.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 60187.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 60146.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 59983.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 59704.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 59265.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 59213.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 59163.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 58254.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 57674.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 57460.7
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 57345.5
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 56166.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 56135.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 55734.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 55218.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 54785.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 54711.1
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 54613.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 54550.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 54240.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 54158.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 53900.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 52455.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 52410.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 51865.7
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 51706.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 50993.7
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 50772.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 50159.8
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 49975.8
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 49219.3
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 49157.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 48608.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 47845.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 47807.7
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 47265.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 47040.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 46832.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 46161.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 46115.6
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 45547.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 44888.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 43886.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 43208.9
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 42976.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 42959.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 42517.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 42104.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 41831.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 41333.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 40714.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 40624.4
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 40290.6
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 40164.2
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 39592.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 39144.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 38608.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 38402.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 38183.8
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 37988.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 36877.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 36597.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 36320.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 35755.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 35550.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 34969.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 34016.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 33530.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 32473.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 32394.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 32155.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 32136.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 31990.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 31853.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 31847.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 30949.2
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 30926.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 30801.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 30708.1
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 29575.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 28609.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 28313.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 27208.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 27023.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 25453.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 25252.6
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 25186.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 24499.8
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 23873.7
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 22391.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 22098.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 21599.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 21128.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 20564.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 20521.3
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 19977.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 19237.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 18976.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 18969.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 18445.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 17578.4
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 17241.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 16479.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 16303.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 14765.5
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 12779.4
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BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

21331.3
Pig sample Sample description nTPM
Caudate
nTPM: 14846.9
Samples: 4

Max nTPM: 17962.5
Min nTPM: 13087.1
Sample A Female 13087.1
Sample B Female 15194.5
Sample C Male 17962.5
Sample D Male 13143.5
Putamen
nTPM: 21331.3
Samples: 4

Max nTPM: 28284.0
Min nTPM: 11224.6
Sample A Female 11224.6
Sample B Female 26618.7
Sample C Male 28284.0
Sample D Male 19197.8
Septum
nTPM: 10125.7
Samples: 4

Max nTPM: 12982.2
Min nTPM: 6746.3
Sample A Female 12912.3
Sample B Female 12982.2
Sample C Male 7862.1
Sample D Male 6746.3
Ventral pallidum
nTPM: 14668.4
Samples: 4

Max nTPM: 20881.3
Min nTPM: 9996.2
Sample A Female 20881.3
Sample B Female 15493.2
Sample C Male 9996.2
Sample D Male 12303.0

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26418.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 26418.4
Samples: 4

Max nTPM: 28366.4
Min nTPM: 25192.2
Sample A Male 25192.2
Sample B Male 26352.9
Sample C Female 25762.0
Sample D Female 28366.4
Septum
nTPM: 13942.4
Samples: 4

Max nTPM: 15866.5
Min nTPM: 11876.3
Sample A Male 11876.3
Sample B Male 15866.5
Sample C Female 14046.4
Sample D Female 13980.3
Ventral forebrain
nTPM: 19778.0
Samples: 4

Max nTPM: 24650.5
Min nTPM: 16859.5
Sample A Male 18313.0
Sample B Male 19288.9
Sample C Female 24650.5
Sample D Female 16859.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

22.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 22.4
74357767 Antisense, RP_051219_04_A06, Mouse strain C57BL/6J (56 days, male) 22.6
81600594 Antisense, RP_090205_01_D02, Mouse strain C57BL/6J (56 days, male) 22.1
Pallidum
Expression energy: 21.9
74357767 Antisense, RP_051219_04_A06, Mouse strain C57BL/6J (56 days, male) 22.5
81600594 Antisense, RP_090205_01_D02, Mouse strain C57BL/6J (56 days, male) 21.3

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