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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
58855.5
nTPM
Pig:
7990.8
nTPM
Allen mouse:
8.0
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
58855.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 35456.8
2301
Female, age 85, both hemispheres
71797.6
2188
Female, age 91, both hemispheres
33080.6
1984
Male, age 76, both hemispheres
19812.9
2090
Male, age 80, both hemispheres
17136.1
Dorsal cochlear nucleus nTPM: 36928.6
2378
Male, age 80, both hemispheres
60214.4
2802
Male, age 74, right hemisphere
38323.4
2187
Female, age 91, both hemispheres
31954.3
2370
Male, age 61, both hemispheres
28816.4
2058
Male, age 76, both hemispheres
25334.5
Dorsal tegmental nucleus nTPM: 32901.0
2358
Male, age 61, both hemispheres
53854.5
1936
Male, age 76, left hemisphere
27485.3
2083
Male, age 80, both hemispheres
26426.5
2326
Male, age 74, both hemispheres
23837.6
Dorsolateral tegmental area nTPM: 22869.7
2141
Male, age 76, both hemispheres
35236.4
2337
Male, age 61, both hemispheres
28838.1
2654
Male, age 80, both hemispheres
23828.4
2751
Female, age 85, both hemispheres
14459.9
2360
Male, age 74, both hemispheres
11985.6
Kolliker-Fuse nucleus nTPM: 33480.0
2793
Female, age 91, left hemisphere
58100.6
2163
Male, age 80, both hemispheres
33100.2
2315
Male, age 76, right hemisphere
9239.1
Lateral lemniscal nuclei nTPM: 27379.3
2320
Female, age 91, left hemisphere
43874.3
2169
Male, age 76, both hemispheres
40512.2
2453
Male, age 74, right hemisphere
30210.3
2036
Male, age 80, both hemispheres
15404.9
2746
Female, age 85, left hemisphere
6894.8
Lateral parabrachial nucleus nTPM: 20129.8
2792
Male, age 76, both hemispheres
34659.6
2790
Male, age 61, both hemispheres
23568.5
2139
Female, age 85, right hemisphere
12271.3
2013
Male, age 80, both hemispheres
10019.6
Lateral vestibular nucleus nTPM: 52293.0
2184
Male, age 76, both hemispheres
58785.1
2311
Male, age 80, both hemispheres
45800.9
Locus coeruleus nTPM: 26916.9
2720
Male, age 74, both hemispheres
54276.9
2162
Male, age 80, both hemispheres
36433.3
2788
Male, age 74, unknown
27187.6
2317
Female, age 72, unknown
22135.1
1980
Male, age 76, both hemispheres
18999.1
2014
Male, age 55, unknown
17931.2
2123
Female, age 91, both hemispheres
11455.1
Medial parabrachial nucleus nTPM: 26655.0
2854
Male, age 80, both hemispheres
40213.8
2786
Male, age 76, both hemispheres
34222.1
2156
Male, age 61, both hemispheres
28954.6
2170
Female, age 91, both hemispheres
23713.2
2463
Female, age 85, right hemisphere
6171.4
Medial periolivary nuclei nTPM: 23990.3
2458
Female, age 91, both hemispheres
53593.1
2171
Female, age 85, both hemispheres
26893.8
2063
Male, age 76, both hemispheres
15757.2
2081
Male, age 80, both hemispheres
13412.0
2791
Male, age 74, right hemisphere
10295.4
Motor facial nucleus nTPM: 41184.8
2795
Female, age 91, both hemispheres
74923.2
2697
Female, age 85, both hemispheres
65150.5
2327
Male, age 80, both hemispheres
59065.1
2365
Male, age 74, right hemisphere
17177.5
2062
Male, age 76, both hemispheres
15794.2
2126
Male, age 61, both hemispheres
14998.2
Motor trigeminal nucleus nTPM: 33955.7
2321
Female, age 91, both hemispheres
59474.1
2309
Male, age 76, both hemispheres
36681.7
2335
Male, age 61, both hemispheres
30145.0
2560
Male, age 74, both hemispheres
24246.8
2079
Male, age 80, both hemispheres
19231.0
Nuclei of the trapezoid body nTPM: 25096.5
2368
Female, age 91, both hemispheres
48671.8
2166
Male, age 80, both hemispheres
30891.8
1983
Male, age 76, both hemispheres
18100.1
2159
Male, age 61, both hemispheres
15680.7
2735
Female, age 85, both hemispheres
12138.1
Nucleus raphe magnus nTPM: 31480.4
2328
Male, age 80, both hemispheres
47028.3
2459
Female, age 91, both hemispheres
45761.2
2172
Female, age 85, both hemispheres
35311.9
2051
Male, age 76, both hemispheres
24151.2
2455
Male, age 74, both hemispheres
21562.3
2160
Male, age 61, both hemispheres
15067.4
Paramedian reticular nucleus nTPM: 20699.7
2313
Male, age 61, both hemispheres
26744.8
2052
Male, age 76, both hemispheres
24969.1
2050
Female, age 85, both hemispheres
19918.7
2057
Male, age 80, both hemispheres
11166.2
Pedunculopontine tegmental nucleus nTPM: 29296.8
2334
Male, age 80, both hemispheres
39138.5
2338
Male, age 61, both hemispheres
33997.8
1921
Female, age 85, both hemispheres
14754.1
Pontine nuclei nTPM: 16182.5
2319
Female, age 91, both hemispheres
34123.2
2787
Female, age 85, both hemispheres
18512.8
2454
Male, age 74, left hemisphere
17058.0
2115
Male, age 80, left hemisphere
16357.1
1863
Male, age 55, unknown
14543.5
1968
Male, age 76, left hemisphere
14133.3
2109
Female, age 72, unknown
8895.9
2727
Male, age 61, right hemisphere
5836.0
Pontine raphe nucleus nTPM: 25339.1
2853
Male, age 76, midline
33066.2
2122
Female, age 85, midline
17612.0
Posteroventral cochlear nucleus nTPM: 22737.2
2341
Male, age 80, both hemispheres
33129.9
2371
Male, age 61, both hemispheres
31998.8
2135
Female, age 91, both hemispheres
18497.2
2752
Female, age 85, both hemispheres
17841.8
2070
Male, age 76, both hemispheres
12218.4
Principal sensory trigeminal nucleus nTPM: 38942.8
2324
Male, age 76, both hemispheres
81317.5
2367
Female, age 91, left hemisphere
48417.9
2158
Male, age 61, both hemispheres
14996.6
2008
Male, age 80, left hemisphere
11039.4
Reticular pontine nucleus, caudal nTPM: 37444.5
2332
Male, age 80, right hemisphere
56946.7
2457
Female, age 91, both hemispheres
52113.0
2559
Male, age 74, both hemispheres
21054.6
2092
Male, age 76, both hemispheres
19663.5
Reticular pontine nucleus, oral nTPM: 28717.9
2366
Female, age 91, both hemispheres
59784.5
2167
Male, age 76, both hemispheres
41121.9
1939
Male, age 80, both hemispheres
18651.1
2361
Male, age 74, both hemispheres
12810.0
2012
Female, age 85, both hemispheres
11221.8
Reticulotegmental nucleus nTPM: 58855.5
2322
Female, age 91, both hemispheres
72591.6
2325
Male, age 76, both hemispheres
62946.2
2333
Male, age 80, both hemispheres
61203.5
2452
Male, age 74, both hemispheres
38680.5
Spinal trigeminal nucleus, oral nTPM: 31057.7
2164
Male, age 80, both hemispheres
55269.0
1978
Male, age 76, both hemispheres
23583.9
2737
Female, age 85, both hemispheres
14320.1
Subcoeruleus area nTPM: 23403.7
2323
Female, age 91, left hemisphere
30690.4
2451
Male, age 74, both hemispheres
28137.2
1958
Male, age 80, both hemispheres
22710.2
2089
Male, age 76, left hemisphere
21117.5
2369
Female, age 85, left hemisphere
14363.3
Superior olive nTPM: 29226.1
2561
Female, age 91, both hemispheres
55866.2
2329
Male, age 80, right hemisphere
51769.6
2020
Male, age 76, both hemispheres
17406.2
2364
Male, age 74, right hemisphere
10819.4
1875
Female, age 85, both hemispheres
10269.3
Ventral periolivary nuclei nTPM: 26858.2
2794
Female, age 91, left hemisphere
45682.0
2165
Male, age 80, both hemispheres
34417.7
2130
Female, age 85, both hemispheres
17576.7
2023
Male, age 76, both hemispheres
9756.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 34086.0
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
7990.8
Pig sample
Sample description
nTPM
Pons nTPM: 7990.8
Samples: 4
Max nTPM: 9939.5
Min nTPM: 5424.7
Sample A
Female
9939.5
Sample B
Female
5424.7
Sample C
Male
8116.0
Sample D
Male
8482.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
