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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:110.4 nTPM
HPA Brain:267.7 nTPM
GTEx:110.4 nTPM
FANTOM5:333.5 Scaled Tags Per Million
Pig:100.4 nTPM
Mouse:300.3 nTPM
Allen mouse:16.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046645
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

267.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 153.0
1781 Male, age 74, unknown 207.5
1857 Female, age 85, left hemisphere 168.0
2290 Female, age 72, unknown 158.1
2846 Female, age 79, unknown 153.6
2288 Male, age 75, left hemisphere 149.3
1854 Male, age 80, left hemisphere 143.2
2289 Male, age 61, right hemisphere 141.7
2481 Female, age 94, left hemisphere 103.0
Globus pallidus, externus
nTPM: 106.8
2772 Female, age 79, unknown 132.6
2567 Female, age 72, unknown 115.2
2395 Male, age 75, both hemispheres 101.5
2646 Male, age 61, right hemisphere 100.9
1996 Male, age 80, right hemisphere 84.0
Globus pallidus, internus
nTPM: 95.6
1818 Male, age 74, unknown 130.8
2566 Female, age 72, unknown 104.5
2483 Female, age 94, right hemisphere 97.9
2037 Male, age 80, right hemisphere 92.7
2287 Male, age 75, right hemisphere 90.0
2111 Female, age 85, right hemisphere 79.5
2778 Female, age 91, both hemispheres 73.8
Nucleus accumbens
nTPM: 153.8
1856 Female, age 91, right hemisphere 218.1
2824 Male, age 61, right hemisphere 191.5
1783 Male, age 74, unknown 190.8
1806 Female, age 85, left hemisphere 161.9
2286 Male, age 75, left hemisphere 137.9
2698 Female, age 72, unknown 135.3
2732 Male, age 80, right hemisphere 110.2
2391 Female, age 94, left hemisphere 84.7
Nucleus basalis of Meynert
nTPM: 126.2
2484 Female, age 94, left hemisphere 140.5
2821 Male, age 75, both hemispheres 132.8
2393 Male, age 80, right hemisphere 132.4
2569 Male, age 61, both hemispheres 99.0
Nucleus of the diagonal band
nTPM: 267.7
2029 Male, age 61, right hemisphere 304.0
2775 Male, age 80, right hemisphere 297.3
1812 Female, age 91, both hemispheres 292.8
2195 Female, age 85, both hemispheres 280.5
1979 Male, age 74, unknown 164.1
Putamen
nTPM: 157.4
1937 Female, age 91, right hemisphere 180.0
1838 Male, age 80, right hemisphere 173.2
2466 Female, age 79, unknown 172.8
2647 Male, age 75, left hemisphere 170.0
1829 Male, age 74, unknown 160.0
2489 Female, age 72, unknown 140.8
2482 Female, age 94, left hemisphere 104.9
Septal nuclei
nTPM: 233.6
1960 Male, age 74, unknown 317.4
2031 Female, age 72, unknown 276.2
2629 Female, age 94, right hemisphere 272.1
2009 Female, age 91, both hemispheres 255.1
2059 Female, age 85, both hemispheres 224.0
2394 Male, age 61, left hemisphere 163.8
2199 Male, age 80, right hemisphere 126.4
Stria terminalis, bed nucleus
nTPM: 261.4
1974 Female, age 91, both hemispheres 314.1
2486 Female, age 94, both hemispheres 292.9
2201 Male, age 74, unknown 177.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 88.7
Samples: 246

Max nTPM: 259.0
Min nTPM: 27.2
Std nTPM: 35.1
Median nTPM: 87.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 259.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 161.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 157.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 157.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 154.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 153.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 151.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 151.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 151.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 149.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 149.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 149.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 147.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 146.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 145.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 144.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 143.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 142.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 141.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 140.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 140.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 139.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 139.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 138.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 138.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 138.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 137.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 136.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 133.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 133.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 132.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 131.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 130.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 130.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 129.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 127.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 124.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 124.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 124.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 123.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 123.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 123.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 122.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 122.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 122.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 121.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 121.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 119.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 118.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 117.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 116.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 116.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 116.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 115.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 115.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 115.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 114.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 113.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 113.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 113.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 112.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 112.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 112.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 112.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 112.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 112.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 112.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 111.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 111.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 111.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 110.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 110.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 110.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 109.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 109.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 109.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 109.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 108.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 107.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 106.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 106.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 106.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 104.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 103.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 103.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 103.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 103.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 103.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 102.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 101.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 100.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 100.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 99.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 99.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 99.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 99.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 99.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 99.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 97.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 97.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 97.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 95.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 95.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 94.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 94.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 94.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 93.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 93.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 91.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 91.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 91.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 90.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 90.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 90.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 89.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 89.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 89.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 88.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 87.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 87.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 87.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 87.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 87.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 87.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 87.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 86.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 86.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 86.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 85.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 85.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 85.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 84.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 83.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 82.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 81.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 80.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 79.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 78.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 78.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 78.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 77.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 77.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 76.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 75.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 75.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 75.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 75.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 75.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 75.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 75.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 75.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 75.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 75.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 74.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 73.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 72.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 72.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 72.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 72.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 71.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 70.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 70.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 69.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 68.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 68.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 68.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 68.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 67.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 66.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 66.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 63.6
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 62.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 62.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 61.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 61.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 60.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 60.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 60.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 59.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 58.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 58.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 58.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 57.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 57.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 57.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 56.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 55.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 55.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 55.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 55.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 54.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 53.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 53.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 53.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 53.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 52.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 52.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 51.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 51.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 51.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 50.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 50.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 50.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 50.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 50.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 50.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 49.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 49.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 49.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 49.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 49.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 48.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 47.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 47.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 46.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 44.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 44.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 43.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 42.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 42.8
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 42.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 42.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 42.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 42.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 42.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 41.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 41.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 41.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 40.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 39.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 39.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 39.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 38.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 38.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 38.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 36.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 34.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 33.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 29.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 29.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 27.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 110.4
Samples: 246

Max nTPM: 191.4
Min nTPM: 16.2
Std nTPM: 36.8
Median nTPM: 115.8
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 191.4
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 187.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 181.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 177.6
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 176.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 176.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 176.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 173.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 172.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 172.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 171.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 166.9
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 166.4
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 165.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 160.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 159.4
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 159.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 157.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 156.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 154.2
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 153.8
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 153.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 153.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 153.3
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 152.7
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 151.9
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 151.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 151.2
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 150.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 150.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 149.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 149.4
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 149.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 149.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 148.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 148.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 148.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 148.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 147.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 146.4
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 145.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 144.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 144.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 144.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 144.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 144.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 143.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 143.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 142.9
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 142.8
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 142.5
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 142.4
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 142.0
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 141.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 141.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 141.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 140.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 140.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 140.1
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 139.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 138.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 138.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 138.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 137.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 137.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 137.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 135.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 135.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 135.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 135.3
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 135.1
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 135.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 134.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 134.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 134.6
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 134.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 134.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 134.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 134.0
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 133.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 133.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 132.8
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 132.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 132.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 132.1
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 131.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 131.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 130.9
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 129.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 129.9
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 129.2
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 129.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 128.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 127.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 127.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 127.3
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 127.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 126.6
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 126.5
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 126.5
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 125.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 125.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 124.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 124.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 124.2
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 124.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 122.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 122.1
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 121.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 121.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 120.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 120.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 120.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 119.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 119.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 119.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 119.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 119.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 117.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 117.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 117.2
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 116.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 116.1
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 115.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 115.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 114.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 113.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 113.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 113.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 112.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 112.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 112.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 112.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 111.4
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 111.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 110.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 110.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 110.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 110.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 109.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 109.1
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 108.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 108.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 107.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 107.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 107.3
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 107.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 105.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 103.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 103.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 103.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 103.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 102.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 102.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 101.9
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 100.9
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 99.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 99.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 96.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 96.1
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 95.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 95.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 95.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 95.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 94.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 94.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 93.6
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 93.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 92.7
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 92.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 90.9
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 90.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 90.4
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 90.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 90.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 89.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 88.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 87.5
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 86.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 84.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 83.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 83.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 82.5
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 82.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 81.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 81.1
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 77.9
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 77.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 77.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 76.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 75.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 74.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 72.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 72.5
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 72.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 72.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 71.3
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 71.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 70.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 70.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 69.5
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 69.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 66.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 66.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 65.5
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 64.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 64.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 64.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 62.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 61.1
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 60.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 60.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 59.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 59.4
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 59.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 59.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 58.6
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 58.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 58.4
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 58.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 56.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 56.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 55.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 55.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 55.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 54.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 53.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 53.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 53.0
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 52.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 51.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 50.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 50.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 49.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 48.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 47.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 43.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 43.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 42.7
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 42.5
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 42.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 40.0
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 39.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 38.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 33.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 16.2
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Brain - Putamen (basal ganglia)
Average nTPM: 86.2
Samples: 205

Max nTPM: 185.7
Min nTPM: 27.7
Std nTPM: 33.5
Median nTPM: 84.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 185.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 161.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 158.2
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 152.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 150.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 146.4
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 145.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 145.1
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 144.0
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 143.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 142.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 141.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 140.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 140.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 139.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 139.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 138.6
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 138.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 137.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 137.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 135.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 134.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 132.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 131.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 130.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 127.4
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 127.2
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 125.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 124.5
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 124.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 123.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 123.6
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 123.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 123.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 121.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 120.7
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 120.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 120.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 120.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 119.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 118.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 118.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 118.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 115.3
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 114.6
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 114.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 114.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 113.9
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 113.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 113.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 113.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 113.3
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 111.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 110.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 109.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 109.5
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 107.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 107.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 106.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 105.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 105.3
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 104.8
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 104.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 104.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 103.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 103.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 103.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 102.9
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 102.6
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 101.8
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 101.8
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 101.0
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 100.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 100.4
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 99.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 96.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 96.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 96.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 95.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 93.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 92.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 92.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 92.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 91.9
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 91.6
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 91.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 91.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 90.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 90.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 89.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 89.0
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 88.7
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 88.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 87.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 87.4
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 86.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 86.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 86.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 85.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 85.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 85.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 84.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 84.6
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 84.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 83.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 83.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 81.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 81.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 80.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 80.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 80.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 79.2
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 78.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 78.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 77.7
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 77.6
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 77.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 76.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 76.3
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 76.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 75.9
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 75.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 75.2
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 74.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 74.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 74.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 74.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 73.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 73.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 72.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 72.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 71.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 71.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 71.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 69.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 68.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 67.7
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 66.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 65.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 65.3
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 65.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 64.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 64.5
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 64.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 64.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 64.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 63.4
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 63.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 63.1
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 62.8
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 60.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 60.3
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 56.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 56.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 56.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 56.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 55.9
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 55.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 55.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 54.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 53.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 53.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 52.4
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 50.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 50.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 50.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 49.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 49.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 49.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 48.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 48.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 48.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 47.7
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 47.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 46.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 45.4
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 45.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 44.5
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 44.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 44.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 43.9
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 43.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 43.6
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 43.4
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 42.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 41.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 41.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 41.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 41.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 41.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 40.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 40.3
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 40.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 39.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 38.8
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 38.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 37.0
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 35.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 35.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 33.7
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 33.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 30.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 30.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 29.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 27.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

333.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 160.6
FF:10164-103B2 76 years, female 160.6
Nucleus accumbens
Scaled Tags Per Million: 333.5
FF:10037-101F1 23-56 years, mixed 333.5
Putamen
Scaled Tags Per Million: 249.2
FF:10176-103C5 60 years, female 249.2
Globus pallidus
Scaled Tags Per Million: 119.7
FF:10175-103C4 60 years, female 178.9
FF:10161-103A8 76 years, female 60.4

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

100.4
Pig sample Sample description nTPM
Caudate
nTPM: 89.4
Samples: 4

Max nTPM: 106.0
Min nTPM: 74.2
Sample A Female 74.2
Sample B Female 95.8
Sample C Male 106.0
Sample D Male 81.4
Putamen
nTPM: 100.4
Samples: 4

Max nTPM: 128.0
Min nTPM: 84.4
Sample A Female 84.4
Sample B Female 86.8
Sample C Male 128.0
Sample D Male 102.2
Septum
nTPM: 93.0
Samples: 4

Max nTPM: 132.0
Min nTPM: 72.6
Sample A Female 84.9
Sample B Female 82.6
Sample C Male 132.0
Sample D Male 72.6
Ventral pallidum
nTPM: 97.7
Samples: 4

Max nTPM: 147.7
Min nTPM: 79.9
Sample A Female 80.9
Sample B Female 79.9
Sample C Male 147.7
Sample D Male 82.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

300.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 260.2
Samples: 4

Max nTPM: 277.7
Min nTPM: 247.5
Sample A Male 251.7
Sample B Male 247.5
Sample C Female 263.7
Sample D Female 277.7
Septum
nTPM: 300.3
Samples: 4

Max nTPM: 317.8
Min nTPM: 277.5
Sample A Male 295.1
Sample B Male 310.8
Sample C Female 317.8
Sample D Female 277.5
Ventral forebrain
nTPM: 293.2
Samples: 4

Max nTPM: 314.9
Min nTPM: 277.6
Sample A Male 277.6
Sample B Male 288.3
Sample C Female 314.9
Sample D Female 291.9

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

16.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 16.3
583561 Antisense, RP_040831_02_H11, Mouse strain C57BL/6J (56 days, male) 17.3
81599672 Antisense, RP_071219_04_G12, Mouse strain C57BL/6J (56 days, male) 15.2
Pallidum
Expression energy: 15.9
583561 Antisense, RP_040831_02_H11, Mouse strain C57BL/6J (56 days, male) 17.6
81599672 Antisense, RP_071219_04_G12, Mouse strain C57BL/6J (56 days, male) 14.1

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