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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-CO1 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
19751.5
Number of samples
349
Samples
Sample
Description
pTPM
TCGA-24-2036-01A
50 years, female, white, stage:Stage IIIA, dead, 1947 days
49199.3
TCGA-10-0933-01A
77 years, female, white, stage:Stage IIIC, dead, 446 days
48926.3
TCGA-04-1338-01A
78 years, female, white, stage:Stage IIIC, alive, 1418 days
48650.9
TCGA-09-2045-01A
50 years, female, asian, stage:Stage IV, dead, 1069 days
40128.7
TCGA-25-1322-01A
62 years, female, white, stage:Stage IV, dead, 91 days
39742.3
TCGA-24-1105-01A
36 years, female, white, stage:Stage IIIC, dead, 1442 days
39222.8
TCGA-24-1845-01A
42 years, female, white, stage:Stage IIIC, alive, 116 days
38869.2
TCGA-13-1403-01A
48 years, female, white, stage:Stage IIIC, dead, 2345 days
38149.6
TCGA-25-1318-01A
54 years, female, white, stage:Stage IIIC, dead, 1064 days
37561.4
TCGA-24-2271-01A
55 years, female, asian, stage:Stage IIIC, dead, 962 days
37345.6
TCGA-OY-A56Q-01A
78 years, female, black or african american, stage:Stage IIA, alive, 576 days
36203.0
TCGA-04-1651-01A
53 years, female, white, stage:Stage IIIC, dead, 1102 days
35945.8
TCGA-04-1648-01A
57 years, female, white, stage:Stage IIIC, dead, 871 days
35143.0
TCGA-24-1565-01A
74 years, female, white, stage:Stage IIIC, dead, 312 days
35103.4
TCGA-24-1426-01A
43 years, female, white, stage:Stage IIIC, alive, 163 days
35047.4
TCGA-23-1120-01A
60 years, female, white, stage:Stage IIIC, alive, 130 days
34982.7
TCGA-13-0720-01A
48 years, female, white, stage:Stage IIIC, dead, 1355 days
34835.4
TCGA-25-2409-01A
71 years, female, white, stage:Stage IV, dead, 821 days
34254.2
TCGA-24-2297-01A
56 years, female, white, stage:Stage IIIC, dead, 1699 days
34225.7
TCGA-61-2111-01A
61 years, female, white, stage:Stage IV, alive, 3825 days
34189.7
TCGA-04-1530-01A
68 years, female, white, stage:Stage IIIC, dead, 3622 days
34016.4
TCGA-24-1104-01A
56 years, female, white, stage:Stage IV, dead, 1933 days
33842.9
TCGA-13-1511-01A
52 years, female, asian, stage:Stage IV, dead, 1650 days
33730.9
TCGA-04-1655-01A
49 years, female, white, stage:Stage IIIB, dead, 1380 days
33611.0
TCGA-24-1923-01A
51 years, female, white, stage:Stage IIIC, dead, 690 days
33393.6
TCGA-24-1423-01A
61 years, female, white, stage:Stage IIIC, alive, 190 days
33031.7
TCGA-24-0982-01A
77 years, female, white, stage:Stage IIIC, dead, 679 days
32927.9
TCGA-24-1467-01A
51 years, female, white, stage:Stage IIIC, dead, 3224 days
32382.2
TCGA-24-1551-01A
53 years, female, white, stage:Stage IIIC, dead, 1579 days
32292.4
TCGA-13-1488-01A
59 years, female, white, stage:Stage IV, dead, 2154 days
32189.0
TCGA-13-1411-01A
81 years, female, white, stage:Stage IIIC, dead, 531 days
32147.6
TCGA-04-1536-01A
60 years, female, black or african american, stage:Stage IV, dead, 885 days
32095.7
TCGA-24-1430-01A
68 years, female, white, stage:Stage IIIC, dead, 863 days
32093.4
TCGA-13-1408-01A
59 years, female, white, stage:Stage IIIC, dead, 1680 days
31668.4
TCGA-30-1857-01A
64 years, female, white, stage:Stage IV, dead, 8 days
31117.0
TCGA-13-0886-01A
67 years, female, white, stage:Stage IIIC, alive, 4665 days
30916.9
TCGA-24-2280-01A
74 years, female, white, stage:Stage IIIC, alive, 2143 days
30705.0
TCGA-24-2035-01A
65 years, female, white, stage:Stage IIIC, dead, 857 days
30704.2
TCGA-24-1425-01A
45 years, female, white, stage:Stage IIIC, alive, 181 days
30575.6
TCGA-13-1501-01A
50 years, female, white, stage:Stage IV, dead, 1314 days
30544.7
TCGA-04-1361-01A
57 years, female, white, stage:Stage IIIB, alive, 989 days
30502.3
TCGA-04-1365-01A
87 years, female, white, stage:Stage IIIB, alive, 947 days
30447.6
TCGA-13-0888-01A
78 years, female, white, stage:Stage IIIC, dead, 2811 days
29819.2
TCGA-24-2026-01A
79 years, female, white, stage:Stage IIIC, dead, 1059 days
29754.1
TCGA-24-2290-01A
56 years, female, white, stage:Stage IIIC, dead, 1102 days
29569.6
TCGA-31-1950-01A
76 years, female, white, stage:Stage IIIC, alive, 571 days
29526.3
TCGA-24-2281-01A
68 years, female, white, stage:Stage IIA, alive, 1357 days
29524.3
TCGA-04-1519-01A
48 years, female, stage:Stage IIIC, alive, 24 days
29503.0
TCGA-25-2042-01A
60 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
29424.5
TCGA-13-1477-01A
49 years, female, white, stage:Stage IV, dead, 1662 days
29402.3
TCGA-13-A5FT-01A
67 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
29336.5
TCGA-25-1329-01A
76 years, female, white, stage:Stage IIIC, dead, 457 days
29300.1
TCGA-13-0768-01A
73 years, female, white, stage:Stage IIIC, dead, 1784 days
29093.7
TCGA-24-2293-01A
47 years, female, white, stage:'--, dead, 506 days
29072.9
TCGA-57-1994-01A
63 years, female, white, stage:'--, alive, 761 days
29064.8
TCGA-24-0979-01A
53 years, female, white, stage:Stage IV, dead, 1264 days
29051.2
TCGA-31-1953-01A
52 years, female, asian, stage:Stage IIIC, alive, 204 days
28953.8
TCGA-04-1331-01A
78 years, female, white, stage:Stage IIIC, dead, 1336 days
28886.5
TCGA-24-1471-01A
60 years, female, white, stage:Stage IIIC, alive, 36 days
28878.5
TCGA-57-1582-01A
50 years, female, white, stage:Stage IIIC, dead, 731 days
28796.7
TCGA-23-1122-01A
53 years, female, white, stage:Stage IIIC, dead, 1189 days
28581.9
TCGA-24-2289-01A
68 years, female, white, stage:Stage IV, dead, 2049 days
28533.7
TCGA-24-1843-01A
66 years, female, white, stage:Stage IIIC, alive, 106 days
28462.0
TCGA-13-0730-01A
71 years, female, white, stage:Stage IIIC, dead, 542 days
28259.2
TCGA-57-1993-01A
56 years, female, white, stage:Stage IIIC, alive, 763 days
28219.7
TCGA-13-1492-01A
66 years, female, white, stage:Stage IIIC, dead, 3819 days
28007.1
TCGA-25-1634-01A
75 years, female, white, stage:Stage IIIC, dead, 1091 days
27908.5
TCGA-23-1116-01A
83 years, female, white, stage:Stage IIIC, dead, 592 days
27731.2
TCGA-25-1326-01A
61 years, female, white, stage:Stage IIIC, dead, 1249 days
27717.3
TCGA-24-1557-01A
49 years, female, white, stage:Stage IIIC, dead, 1213 days
27427.8
TCGA-24-1847-01A
45 years, female, white, stage:Stage IV, alive, 343 days
27234.8
TCGA-04-1362-01A
59 years, female, white, stage:Stage IIC, dead, 1348 days
27095.7
TCGA-61-2088-01A
51 years, female, white, stage:Stage IIIC, alive, 145 days
26931.1
TCGA-29-1783-01A
58 years, female, white, stage:Stage IIIC, alive, 220 days
26769.9
TCGA-20-1687-01A
46 years, female, white, stage:Stage IV, alive, 81 days
26688.6
TCGA-29-1763-01A
43 years, female, black or african american, stage:Stage IIC, alive, 2032 days
26584.4
TCGA-24-1428-01A
50 years, female, white, stage:Stage IIIC, alive, 529 days
26348.3
TCGA-13-0800-01A
52 years, female, white, stage:Stage IIIC, alive, 2661 days
26144.3
TCGA-24-2261-01A
76 years, female, white, stage:Stage IIIC, dead, 24 days
26039.5
TCGA-13-0804-01A
73 years, female, white, stage:Stage IIIC, dead, 1073 days
25968.4
TCGA-13-0714-01A
55 years, female, white, stage:Stage IV, dead, 189 days
25812.2
TCGA-13-0885-01A
70 years, female, white, stage:Stage IIIC, alive, 3388 days
25782.5
TCGA-31-1944-01A
47 years, female, white, stage:Stage IIIC, alive, 1386 days
25756.8
TCGA-61-1910-01A
56 years, female, white, stage:Stage IIC, alive, 1127 days
25490.0
TCGA-24-1413-01A
51 years, female, white, stage:Stage IIIC, alive, 192 days
25406.8
TCGA-25-1623-01A
71 years, female, white, stage:Stage IV, dead, 565 days
25280.9
TCGA-23-1030-01A
64 years, female, white, stage:Stage IIIC, alive, 886 days
25187.8
TCGA-57-1584-01A
47 years, female, white, stage:Stage IIIC, alive, 643 days
25159.1
TCGA-13-1405-01A
49 years, female, white, stage:Stage IV, dead, 868 days
24837.5
TCGA-5X-AA5U-01A
61 years, female, black or african american, stage:Stage IIC, alive, 361 days
24659.6
TCGA-59-2354-01A
63 years, female, white, stage:Stage IIIC, dead, 1046 days
24393.1
TCGA-61-2113-01A
53 years, female, white, stage:Stage IIC, dead, 676 days
24380.1
TCGA-23-1119-01A
64 years, female, white, stage:Stage IIIC, alive, 3953 days
24337.1
TCGA-24-2020-01A
67 years, female, white, stage:Stage IIIC, dead, 4624 days
24193.8
TCGA-24-2027-01A
51 years, female, white, stage:Stage IV, dead, 3337 days
24071.5
TCGA-23-1809-01A
63 years, female, white, stage:Stage IIC, alive, 16 days
24059.6
TCGA-25-1313-01A
62 years, female, white, stage:Stage IV, dead, 820 days
23977.2
TCGA-24-1469-01A
71 years, female, white, stage:Stage IIIC, alive, 277 days
23841.9
TCGA-24-1616-01A
56 years, female, white, stage:Stage IIIC, dead, 1163 days
23801.3
TCGA-24-1416-01A
34 years, female, white, stage:Stage IV, alive, 194 days
23659.6
TCGA-24-1464-01A
70 years, female, white, stage:Stage IIIC, dead, 379 days
23600.2
TCGA-30-1866-01A
61 years, female, white, stage:Stage IV, dead, 1114 days
23486.7
TCGA-23-2077-01A
45 years, female, white, stage:Stage IIIC, alive, 3525 days
23383.2
TCGA-04-1347-01A
81 years, female, white, stage:Stage IV, alive, 1919 days
23382.7
TCGA-29-2427-01A
60 years, female, white, stage:Stage IIIC, alive, 1900 days
23379.4
TCGA-13-0762-01A
65 years, female, white, stage:Stage IIIC, alive, 3400 days
23229.3
TCGA-57-1583-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 346 days
23163.1
TCGA-10-0928-01A
71 years, female, white, stage:Stage IIIC, dead, 563 days
23117.4
TCGA-24-2267-01A
58 years, female, white, stage:Stage IIB, dead, 1446 days
23068.0
TCGA-24-2298-01A
55 years, female, white, stage:Stage IIIC, dead, 1620 days
22894.2
TCGA-24-0968-01A
59 years, female, white, stage:Stage IIIC, dead, 598 days
22866.1
TCGA-13-0765-01A
50 years, female, white, stage:Stage IIIC, dead, 1389 days
22855.8
TCGA-29-1688-01A
39 years, female, white, stage:Stage IIIC, dead, 2400 days
22821.7
TCGA-24-1930-01A
53 years, female, white, stage:Stage IIIC, dead, 2467 days
22732.4
TCGA-29-1778-01A
77 years, female, white, stage:Stage IIIC, alive, 454 days
22584.9
TCGA-20-1686-01A
75 years, female, white, stage:Stage IIIC, alive, 89 days
22480.9
TCGA-04-1356-01A
62 years, female, white, stage:Stage IIC, dead, 1499 days
22456.4
TCGA-61-2104-01A
53 years, female, white, stage:Stage IIC, alive, 2338 days
22432.6
TCGA-13-1485-01A
48 years, female, white, stage:Stage IV, dead, 629 days
22394.4
TCGA-36-1580-01A
82 years, female, stage:Stage IIIC, dead, 737 days
22222.3
TCGA-24-2254-01A
66 years, female, white, stage:Stage IIIC, dead, 1736 days
22177.4
TCGA-23-2078-01A
66 years, female, white, stage:Stage IIIC, alive, 2661 days
22139.5
TCGA-24-1604-01A
66 years, female, white, stage:Stage IIIC, dead, 2688 days
22103.6
TCGA-31-1951-01A
58 years, female, white, stage:Stage IIIC, alive, 684 days
22066.8
TCGA-13-1496-01A
65 years, female, white, stage:Stage IIIC, dead, 129 days
21942.4
TCGA-24-1427-01A
58 years, female, stage:Stage IIIC, alive, 147 days
21912.7
TCGA-61-2003-01A
53 years, female, white, stage:Stage IIIC, alive, 122 days
21781.0
TCGA-24-1603-01A
53 years, female, white, stage:Stage IIIB, dead, 2742 days
21580.6
TCGA-13-1404-01A
48 years, female, white, stage:Stage IIIC, alive, 2469 days
21560.4
TCGA-24-1928-01A
77 years, female, white, stage:Stage IIIC, dead, 336 days
21475.3
TCGA-23-1111-01A
63 years, female, white, stage:Stage IIIC, alive, 98 days
21470.8
TCGA-36-1568-01A
52 years, female, stage:Stage IIIC, alive, 875 days
21354.1
TCGA-25-1321-01A
65 years, female, white, stage:Stage IIIC, dead, 1033 days
21329.7
TCGA-VG-A8LO-01A
55 years, female, black or african american, stage:Stage IV, dead, 24 days
21327.2
TCGA-13-1487-01A
74 years, female, white, stage:Stage IV, dead, 681 days
21319.2
TCGA-13-1483-01A
61 years, female, white, stage:Stage IIIC, dead, 895 days
21292.6
TCGA-24-2023-01A
54 years, female, white, stage:Stage IIIA, dead, 1364 days
21209.1
TCGA-24-1546-01A
46 years, female, white, stage:Stage IIIC, dead, 1955 days
21203.0
TCGA-13-1509-01A
64 years, female, white, stage:Stage IV, alive, 2438 days
21139.9
TCGA-24-1422-01A
82 years, female, black or african american, stage:Stage IIIC, dead, 23 days
21116.1
TCGA-24-1844-01A
64 years, female, white, stage:Stage IIIC, alive, 113 days
21068.9
TCGA-36-1581-01A
63 years, female, white, stage:Stage IIC, alive, 751 days
20936.7
TCGA-29-1770-01A
54 years, female, white, stage:Stage IIIC, alive, 741 days
20927.3
TCGA-09-1662-01A
58 years, female, white, stage:Stage IV, dead, 2717 days
20858.4
TCGA-23-1110-01A
42 years, female, white, stage:Stage IIIC, alive, 1658 days
20752.7
TCGA-23-1023-01A
65 years, female, white, stage:Stage IIIC, alive, 1233 days
20621.4
TCGA-25-2392-01A
75 years, female, white, stage:Stage IV, dead, 31 days
20557.1
TCGA-59-2348-01A
59 years, female, white, stage:Stage IIIC, alive, 5481 days
20500.6
TCGA-29-1693-01A
72 years, female, white, stage:Stage IIIC, alive, 3096 days
20333.4
TCGA-25-1319-01A
73 years, female, white, stage:Stage IIIC, dead, 1977 days
20304.8
TCGA-25-1628-01A
67 years, female, white, stage:Stage IIIC, dead, 627 days
20223.4
TCGA-25-1323-01A
72 years, female, white, stage:Stage IIIC, dead, 395 days
20149.2
TCGA-09-1673-01A
50 years, female, white, stage:Stage IV, alive, 92 days
20148.3
TCGA-13-0726-01A
55 years, female, white, stage:Stage IIIC, dead, 949 days
20088.8
TCGA-04-1364-01A
61 years, female, white, stage:Stage IIIC, dead, 1024 days
20028.4
TCGA-04-1350-01A
46 years, female, white, stage:Stage IIIC, dead, 1946 days
19960.8
TCGA-13-1495-01A
60 years, female, white, stage:Stage IIIC, dead, 2749 days
19881.4
TCGA-13-0891-01A
73 years, female, white, stage:Stage IV, dead, 3128 days
19807.6
TCGA-25-1320-01A
65 years, female, white, stage:Stage IIIC, dead, 1155 days
19708.7
TCGA-24-1563-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
19688.4
TCGA-30-1853-01A
58 years, female, white, stage:Stage IIIC, dead, 1103 days
19597.5
TCGA-61-2102-01A
74 years, female, white, stage:Stage IIIC, dead, 197 days
19568.6
TCGA-24-1924-01A
65 years, female, white, stage:Stage IIIC, dead, 919 days
19554.5
TCGA-13-0906-01A
50 years, female, white, stage:Stage IIIC, alive, 3619 days
19489.7
TCGA-61-2098-01A
62 years, female, white, stage:Stage IIIC, alive, 1993 days
19392.9
TCGA-29-2414-01A
75 years, female, white, stage:Stage IIIC, dead, 2621 days
19360.8
TCGA-13-1505-01A
63 years, female, white, stage:Stage IIIC, alive, 1998 days
19358.8
TCGA-36-1570-01A
49 years, female, white, stage:Stage IIIC, alive, 655 days
19322.9
TCGA-61-2097-01A
71 years, female, white, stage:Stage IIC, alive, 1844 days
19308.9
TCGA-61-2109-01A
40 years, female, white, stage:Stage IIIC, dead, 629 days
19292.7
TCGA-24-1418-01A
68 years, female, white, stage:Stage IIIC, alive, 243 days
19281.4
TCGA-13-0797-01A
49 years, female, white, stage:Stage IIIC, alive, 2121 days
19277.4
TCGA-25-1315-01A
50 years, female, white, stage:Stage IIIC, dead, 1583 days
19123.6
TCGA-25-2398-01A
71 years, female, white, stage:Stage IIIC, dead, 1369 days
18985.8
TCGA-24-1424-01A
67 years, female, white, stage:Stage IIIC, alive, 183 days
18850.0
TCGA-04-1542-01A
52 years, female, white, stage:Stage IIIB, dead, 2561 days
18795.6
TCGA-24-1552-01A
77 years, female, white, stage:Stage IIIC, dead, 1259 days
18758.3
TCGA-23-1109-01A
62 years, female, white, stage:Stage IIIC, dead, 1562 days
18736.5
TCGA-25-1328-01A
38 years, female, white, stage:Stage IIIC, dead, 2009 days
18649.8
TCGA-57-1586-01A
66 years, female, white, stage:Stage IIIC, alive, 679 days
18615.4
TCGA-23-1123-01A
59 years, female, white, stage:Stage IIIC, dead, 1018 days
18453.5
TCGA-13-1498-01A
73 years, female, white, stage:Stage IIIC, dead, 2012 days
18280.1
TCGA-25-1635-01A
71 years, female, white, stage:Stage IIIC, dead, 1583 days
18215.0
TCGA-29-2428-01A
58 years, female, white, stage:Stage IIIC, alive, 1372 days
18174.1
TCGA-61-2110-01A
56 years, female, white, stage:Stage IIIC, dead, 1354 days
18052.8
TCGA-59-2355-01A
58 years, female, white, stage:Stage IV, dead, 65 days
17909.7
TCGA-13-1409-01A
73 years, female, white, stage:Stage IIIC, dead, 1742 days
17876.7
TCGA-13-0887-01A
42 years, female, white, stage:Stage IIIC, dead, 2028 days
17853.0
TCGA-24-2288-01A
70 years, female, white, stage:Stage IIIC, dead, 25 days
17829.9
TCGA-30-1714-01A
68 years, female, white, stage:Stage IV, dead, 1158 days
17718.4
TCGA-23-2084-01A
45 years, female, white, stage:Stage IV, dead, 1516 days
17557.2
TCGA-25-1317-01A
66 years, female, white, stage:Stage IIIC, dead, 61 days
17511.0
TCGA-04-1343-01A
72 years, female, white, stage:Stage IV, dead, 361 days
17472.2
TCGA-23-1024-01A
52 years, female, white, stage:Stage IV, alive, 468 days
17302.8
TCGA-61-2101-01A
55 years, female, white, stage:Stage IIIC, dead, 1688 days
17218.9
TCGA-61-1918-01A
45 years, female, white, stage:Stage IV, dead, 479 days
17158.5
TCGA-24-1435-01A
57 years, female, white, stage:Stage IIIC, dead, 1324 days
17027.6
TCGA-24-1846-01A
45 years, female, stage:Stage IIIC, alive, 133 days
16983.1
TCGA-59-2363-01A
40 years, female, asian, stage:Stage IIIA, alive, 165 days
16917.9
TCGA-25-2404-01A
38 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
16902.2
TCGA-13-0725-01A
44 years, female, white, stage:Stage IIIC, dead, 377 days
16895.7
TCGA-36-1571-01A
53 years, female, white, stage:Stage IIIB, dead, 695 days
16881.5
TCGA-09-2051-01A
42 years, female, white, stage:Stage IIIC, alive, 1919 days
16591.9
TCGA-10-0927-01A
65 years, female, stage:Stage IIIC, dead, 2490 days
16579.2
TCGA-29-1785-01A
55 years, female, white, stage:Stage IIIC, dead, 1104 days
16485.4
TCGA-13-0724-01A
72 years, female, white, stage:Stage IV, dead, 83 days
16412.5
TCGA-31-1959-01A
49 years, female, white, stage:Stage IV, alive, 67 days
16282.5
TCGA-29-1769-01A
40 years, female, white, stage:Stage IIIC, alive, 699 days
16117.9
TCGA-61-1995-01A
43 years, female, white, stage:Stage IIIC, alive, 61 days
16023.6
TCGA-04-1332-01A
70 years, female, white, stage:Stage IIIC, dead, 1247 days
15969.1
TCGA-25-1630-01A
73 years, female, white, stage:Stage IIIC, dead, 1162 days
15965.1
TCGA-24-1103-01A
50 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
15919.5
TCGA-25-1870-01A
59 years, female, white, stage:Stage IIIC, dead, 455 days
15862.2
TCGA-61-1907-01A
63 years, female, white, stage:Stage IIIC, alive, 952 days
15798.5
TCGA-30-1861-01A
74 years, female, white, stage:Stage IIIC, dead, 1058 days
15794.4
TCGA-25-1626-01A
65 years, female, white, stage:Stage IIIC, dead, 518 days
15710.3
TCGA-24-1419-01A
62 years, female, white, stage:Stage IIIC, alive, 239 days
15683.8
TCGA-13-2060-01A
51 years, female, white, stage:Stage IV, alive, 2369 days
15611.5
TCGA-29-1694-01A
45 years, female, white, stage:Stage IIIC, dead, 1187 days
15498.0
TCGA-30-1718-01A
44 years, female, white, stage:Stage IIIC, dead, 1579 days
15409.8
TCGA-20-1682-01A
56 years, female, white, stage:Stage IIIC, alive, 837 days
15376.3
TCGA-23-1027-01A
48 years, female, white, stage:Stage IIIC, dead, 976 days
15263.5
TCGA-59-2351-01A
51 years, female, white, stage:Stage IIIC, alive, 3532 days
15247.1
TCGA-09-0366-01A
55 years, female, white, stage:Stage IIIC, dead, 1757 days
15243.7
TCGA-29-1695-01A
62 years, female, white, stage:Stage IIIC, dead, 1229 days
15236.8
TCGA-31-1946-01A
30 years, female, stage:Stage IIIC, alive, 918 days
15206.8
TCGA-13-1512-01A
49 years, female, white, stage:Stage IIIC, alive, 442 days
15171.2
TCGA-13-1407-01A
51 years, female, white, stage:Stage IIIC, alive, 2534 days
15170.9
TCGA-23-1113-01A
48 years, female, white, stage:Stage IV, dead, 949 days
15148.9
TCGA-57-1585-01A
57 years, female, white, stage:Stage IIIC, dead, 53 days
15143.7
TCGA-24-1549-01A
58 years, female, white, stage:Stage IIIB, dead, 1721 days
15103.3
TCGA-61-1919-01A
58 years, female, white, stage:Stage IIIC, dead, 1161 days
15009.7
TCGA-25-1312-01A
69 years, female, white, stage:Stage IV, dead, 31 days
14937.3
TCGA-61-2092-01A
57 years, female, white, stage:Stage IIIC, alive, 1573 days
14933.3
TCGA-13-1499-01A
56 years, female, white, stage:Stage IIIC, alive, 3500 days
14879.4
TCGA-36-1577-01A
43 years, female, asian, stage:Stage IIC, alive, 783 days
14807.3
TCGA-09-0369-01A
56 years, female, white, stage:Stage IIIC, dead, 1082 days
14773.0
TCGA-10-0937-01A
44 years, female, white, stage:Stage IIIC, dead, 608 days
14741.2
TCGA-24-1431-01A
67 years, female, white, stage:Stage IIIC, dead, 583 days
14678.6
TCGA-24-1562-01A
67 years, female, white, stage:Stage IIIC, dead, 1384 days
14668.8
TCGA-25-2400-01A
76 years, female, white, stage:Stage IIIC, dead, 1278 days
14634.3
TCGA-09-2054-01A
58 years, female, black or african american, stage:Stage IIIC, dead, 637 days
14359.4
TCGA-25-2399-01A
80 years, female, white, stage:Stage IIIC, dead, 608 days
14355.4
TCGA-25-2401-01A
64 years, female, white, stage:Stage IIIC, dead, 90 days
14314.6
TCGA-61-1998-01A
48 years, female, white, stage:Stage IIIC, alive, 168 days
14306.9
TCGA-24-1850-01A
72 years, female, white, stage:Stage IIIC, alive, 168 days
14301.7
TCGA-29-1768-01A
50 years, female, white, stage:Stage IV, dead, 952 days
14297.3
TCGA-61-1737-01A
42 years, female, white, stage:Stage IV, alive, 1364 days
14241.2
TCGA-29-1691-01A
51 years, female, white, stage:Stage IIIC, dead, 1470 days
14227.3
TCGA-09-2048-01A
63 years, female, white, stage:Stage IIIC, dead, 138 days
14191.2
TCGA-24-1434-01A
59 years, female, white, stage:Stage IIIC, dead, 568 days
14142.5
TCGA-10-0931-01A
44 years, female, white, stage:Stage IIIC, dead, 1000 days
14140.4
TCGA-61-2000-01A
67 years, female, white, stage:Stage IIIC, alive, 441 days
14091.7
TCGA-61-1900-01A
51 years, female, black or african american, stage:Stage IIIB, alive, 176 days
14049.5
TCGA-29-1762-01A
59 years, female, white, stage:Stage IV, dead, 2634 days
14012.2
TCGA-59-2350-01A
44 years, female, stage:Stage IV, dead, 679 days
13961.5
TCGA-13-0883-01A
61 years, female, white, stage:Stage IIIC, dead, 2097 days
13955.2
TCGA-29-1696-01A
43 years, female, white, stage:Stage IIIC, dead, 1032 days
13938.2
TCGA-24-2024-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
13930.0
TCGA-31-1956-01A
60 years, female, white, stage:Stage IIIB, alive, 1342 days
13924.1
TCGA-29-1705-01A
47 years, female, white, stage:Stage IIIC, dead, 555 days
13909.2
TCGA-59-A5PD-01A
55 years, female, black or african american, stage:Stage IC, dead, 624 days
13882.6
TCGA-25-2396-01A
71 years, female, white, stage:Stage IIIC, dead, 92 days
13770.4
TCGA-29-1690-01A
66 years, female, white, stage:Stage IIIC, dead, 1448 days
13654.4
TCGA-24-2033-01A
87 years, female, white, stage:Stage IIIC, dead, 562 days
13625.0
TCGA-36-1569-01A
52 years, female, white, stage:Stage IIIC, alive, 885 days
13592.8
TCGA-61-1733-01A
71 years, female, white, stage:Stage IIIC, alive, 967 days
13561.5
TCGA-24-1560-01A
51 years, female, white, stage:Stage IIIC, dead, 1341 days
13560.1
TCGA-23-1028-01A
43 years, female, white, stage:Stage IIIC, alive, 1503 days
13481.7
TCGA-29-1784-01A
55 years, female, white, stage:Stage IIIC, alive, 163 days
13318.2
TCGA-61-1741-01A
76 years, female, white, stage:Stage IIIB, dead, 1024 days
13306.3
TCGA-23-1022-01A
67 years, female, white, stage:Stage IIIC, dead, 1511 days
13115.6
TCGA-23-1118-01A
45 years, female, white, stage:Stage IIIC, alive, 2616 days
13084.7
TCGA-24-0966-01A
78 years, female, black or african american, stage:Stage IIIC, alive, 232 days
12979.2
TCGA-09-1670-01A
57 years, female, white, stage:Stage IIIA, alive, 547 days
12972.7
TCGA-13-0916-01A
49 years, female, white, stage:Stage IIIC, alive, 1785 days
12827.1
TCGA-09-1669-01A
54 years, female, white, stage:Stage IIIA, alive, 928 days
12655.1
TCGA-09-1666-01A
57 years, female, white, stage:Stage IIIC, alive, 1752 days
12640.3
TCGA-30-1892-01A
52 years, female, white, stage:Stage IIIC, dead, 1484 days
12559.4
TCGA-36-1576-01A
76 years, female, stage:Stage IIIC, alive, 915 days
12502.6
TCGA-29-1710-01A
54 years, female, white, stage:Stage IIIC, dead, 951 days
12477.2
TCGA-61-2002-01A
46 years, female, white, stage:Stage IIIC, alive, 547 days
12436.1
TCGA-24-1553-01A
53 years, female, white, stage:Stage IIIB, dead, 1767 days
12423.6
TCGA-09-0364-01A
80 years, female, white, stage:Stage IIC, dead, 887 days
12343.4
TCGA-13-0897-01A
54 years, female, white, stage:Stage IIIC, dead, 2182 days
12057.2
TCGA-30-1862-01A
65 years, female, white, stage:Stage IV, dead, 186 days
12056.1
TCGA-24-1417-01A
54 years, female, white, stage:Stage IV, alive, 238 days
12000.8
TCGA-25-1631-01A
73 years, female, white, stage:Stage IIIC, dead, 9 days
11993.1
TCGA-61-2008-01A
40 years, female, asian, stage:Stage IIC, alive, 932 days
11906.4
TCGA-04-1514-01A
45 years, female, white, stage:Stage IIIA, dead, 1720 days
11807.1
TCGA-61-1914-01A
65 years, female, stage:Stage IIIC, alive, 1722 days
11793.1
TCGA-24-2038-01A
68 years, female, white, stage:Stage IIIA, dead, 1354 days
11701.9
TCGA-61-1911-01A
55 years, female, white, stage:Stage IIA, alive, 1293 days
11674.6
TCGA-30-1860-01A
58 years, female, white, stage:Stage IIIC, dead, 1366 days
11626.3
TCGA-13-1510-01A
62 years, female, white, stage:Stage IIIC, dead, 1359 days
11623.7
TCGA-61-1721-01A
38 years, female, white, stage:Stage IV, alive, 338 days
11427.3
TCGA-13-1410-01A
57 years, female, white, stage:Stage IV, alive, 2464 days
11356.1
TCGA-25-1627-01A
73 years, female, white, stage:Stage IIIC, dead, 394 days
11328.0
TCGA-61-1728-01A
59 years, female, white, stage:Stage IV, alive, 848 days
11254.9
TCGA-24-1550-01A
49 years, female, white, stage:Stage IIIC, dead, 1249 days
11249.5
TCGA-29-1766-01A
74 years, female, white, stage:Stage IIIC, dead, 1199 days
11092.3
TCGA-13-1497-01A
47 years, female, white, stage:Stage IIIC, alive, 3871 days
11081.4
TCGA-61-1724-01A
47 years, female, white, stage:Stage IIIC, dead, 637 days
10977.2
TCGA-13-0795-01A
66 years, female, white, stage:Stage IIIC, dead, 619 days
10939.1
TCGA-24-1474-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 676 days
10930.8
TCGA-36-1574-01A
48 years, female, asian, stage:Stage IIIC, alive, 686 days
10929.7
TCGA-61-2012-01A
81 years, female, white, stage:Stage IIC, alive, 932 days
10875.2
TCGA-WR-A838-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 304 days
10739.7
TCGA-29-1774-01A
82 years, female, white, stage:Stage IIIC, alive, 527 days
10720.5
TCGA-20-0987-01A
61 years, female, white, stage:Stage IIIC, dead, 701 days
10658.0
TCGA-25-1632-01A
68 years, female, white, stage:Stage IV, dead, 1799 days
10351.9
TCGA-61-2009-01A
65 years, female, white, stage:Stage IIIC, alive, 1212 days
10065.3
TCGA-24-1558-01A
73 years, female, white, stage:Stage IIIC, dead, 594 days
10057.8
TCGA-61-1725-01A
40 years, female, white, stage:Stage IIIC, alive, 956 days
9660.4
TCGA-13-0920-01A
65 years, female, white, stage:Stage IIIC, dead, 1484 days
9607.1
TCGA-13-0911-01A
55 years, female, white, stage:Stage IV, dead, 1355 days
9341.6
TCGA-23-1107-01A
59 years, female, white, stage:Stage IV, dead, 9 days
9315.5
TCGA-24-1567-01A
54 years, female, white, stage:Stage IIIB, dead, 524 days
8982.5
TCGA-29-A5NZ-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
8979.8
TCGA-25-1877-01A
81 years, female, white, stage:Stage IIIC, dead, 730 days
8830.1
TCGA-61-1738-01A
60 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
8716.7
TCGA-29-1703-01A
56 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
8606.3
TCGA-29-1711-01A
45 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
8516.8
TCGA-59-2352-01A
78 years, female, white, stage:Stage IIIC, dead, 286 days
8455.9
TCGA-29-1761-01A
80 years, female, asian, stage:Stage IIIC, dead, 528 days
8273.2
TCGA-29-1776-01A
63 years, female, black or african american, stage:Stage IIIC, alive, 360 days
8212.1
TCGA-25-2393-01A
81 years, female, white, stage:Stage IIIC, dead, 1157 days
8177.2
TCGA-13-0924-01A
45 years, female, white, stage:Stage IV, alive, 2614 days
7816.5
TCGA-25-1316-01A
55 years, female, white, stage:Stage IIIC, dead, 1279 days
7801.3
TCGA-20-1683-01A
65 years, female, white, stage:Stage IIIC, alive, 772 days
7796.2
TCGA-29-1697-01A
62 years, female, white, stage:Stage IIIC, dead, 949 days
7787.2
TCGA-13-1506-01A
45 years, female, white, stage:Stage IIIC, dead, 1039 days
7600.7
TCGA-13-0923-01A
74 years, female, white, stage:Stage IIIC, alive, 2547 days
7485.7
TCGA-24-1544-01A
71 years, female, black or african american, stage:Stage IIIC, dead, 820 days
7428.3
TCGA-13-1489-01A
70 years, female, white, stage:Stage IIIC, dead, 2553 days
7389.7
TCGA-29-1701-01A
56 years, female, white, stage:Stage IIIC, dead, 515 days
7372.3
TCGA-04-1341-01A
85 years, female, white, stage:'--, alive, 33 days
7289.7
TCGA-29-2425-01A
60 years, female, white, stage:Stage IIIC, alive, 1977 days
7281.3
TCGA-24-1842-01A
49 years, female, white, stage:Stage IIIC, alive, 253 days
6810.0
TCGA-10-0938-01A
80 years, female, white, stage:Stage IIIC, dead, 636 days
6599.0
TCGA-30-1891-01A
61 years, female, white, stage:Stage IIIC, dead, 914 days
6470.2
TCGA-13-0727-01A
71 years, female, white, stage:Stage IIIC, dead, 462 days
6451.9
TCGA-09-0367-01A
67 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
6382.2
TCGA-29-1777-01A
47 years, female, white, stage:Stage IIIC, alive, 374 days
6243.7
TCGA-25-1633-01A
64 years, female, white, stage:Stage IIIC, dead, 1891 days
6211.2
TCGA-29-1781-01A
69 years, female, white, stage:Stage IIIC, alive, 255 days
6096.7
TCGA-13-0766-01A
42 years, female, white, stage:Stage IIIC, dead, 1725 days
6045.0
TCGA-13-1507-01A
77 years, female, white, stage:Stage IIIC, dead, 1993 days
5146.2
TCGA-20-0991-01A
78 years, female, white, stage:Stage IIB, alive, 797 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-CO1 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
16536.3
Number of samples
81
Samples
Sample
Description
pTPM
DO46428
59 years, female, NA, stage:IV, alive, 2644 days
62291.5
DO46400
70 years, female, NA, stage:III, dead, 719 days
51948.8
DO46408
56 years, female, NA, stage:III, dead, 489 days
44373.4
DO46518
62 years, female, NA, stage:III, alive, 2960 days
43460.5
DO46396
64 years, female, NA, stage:III, dead, 583 days
41397.5
DO46546
73 years, female, NA, stage:III, dead, 1889 days
34314.0
DO46382
62 years, female, NA, stage:IV, dead, 311 days
28290.5
DO46404
55 years, female, NA, stage:III, dead, 690 days
24650.9
DO46325
54 years, female, NA, stage:III, dead, 477 days
24245.5
DO46334
77 years, female, NA, stage:III, dead, 496 days
23983.9
DO46329
52 years, female, NA, stage:III, dead, 1699 days
23551.3
DO46566
78 years, female, NA, stage:III, dead, 673 days
22623.0
DO46438
55 years, female, NA, stage:IV, alive, 2227 days
22332.6
DO46513
54 years, female, NA, stage:IV, dead, 1883 days
22208.8
DO46360
58 years, female, NA, stage:IV, dead, 1759 days
21772.9
DO46398
66 years, female, NA, stage:III, alive, 437 days
21164.6
DO46330
60 years, female, NA, stage:III, dead, 684 days
20188.9
DO46551
58 years, female, NA, stage:III, dead, 1055 days
20128.5
DO46588
74 years, female, NA, stage:III, dead, 438 days
20037.9
DO46468
67 years, female, NA, stage:III, alive, 2776 days
19075.6
DO46538
57 years, female, NA, stage:III, dead, 1527 days
19014.2
DO46443
59 years, female, NA, stage:III, dead, 2464 days
18536.9
DO46340
62 years, female, NA, stage:III, dead, 616 days
18529.8
DO46378
59 years, female, NA, stage:III, alive, 843 days
18526.7
DO46561
52 years, female, NA, stage:III, dead, 195 days
18501.0
DO46327
54 years, female, NA, stage:III, dead, 184 days
18357.8
DO46597
60 years, female, NA, stage:III, dead, 393 days
17611.0
DO46348
58 years, female, NA, stage:IV, dead, 287 days
17490.6
DO46326
51 years, female, NA, stage:III, dead, 701 days
17180.1
DO46374
69 years, female, NA, stage:III, dead, 1409 days
17136.5
DO46331
72 years, female, NA, stage:III, dead, 612 days
17057.9
DO46372
39 years, female, NA, stage:III, dead, 1326 days
16679.8
DO46533
46 years, female, NA, stage:III, alive, 3667 days
16651.7
DO46336
70 years, female, NA, stage:IV, dead, 664 days
16567.8
DO46458
67 years, female, NA, stage:IV, alive, 3787 days
16432.3
DO46344
46 years, female, NA, stage:III, dead, 642 days
16397.1
DO46362
61 years, female, NA, stage:III, dead, 1639 days
16071.4
DO46354
73 years, female, NA, stage:III, dead, 843 days
15999.0
DO46463
49 years, female, NA, stage:III, dead, 2451 days
15990.4
DO46523
52 years, female, NA, stage:IV, alive, 1873 days
15889.0
DO46358
60 years, female, NA, stage:III, dead, 423 days
15806.6
DO46528
56 years, female, NA, stage:III, alive, 6139 days
15788.9
DO46571
61 years, female, NA, stage:III, dead, 243 days
15566.1
DO46346
54 years, female, NA, stage:III, dead, 1187 days
15135.1
DO46560
45 years, female, NA, stage:IV, dead, 286 days
14181.6
DO46508
50 years, female, NA, stage:III, dead, 2101 days
14169.4
DO46436
58 years, female, NA, stage:III, alive, 3193 days
13536.4
DO46364
45 years, female, NA, stage:III, dead, 806 days
13128.2
DO46370
54 years, female, NA, stage:III, dead, 1727 days
12892.0
DO46606
73 years, female, NA, stage:III, alive, 804 days
12850.8
DO46342
67 years, female, NA, stage:III, dead, 1398 days
12227.1
DO46386
49 years, female, NA, stage:III, dead, 1162 days
12111.8
DO46332
56 years, female, NA, stage:III, dead, 689 days
11902.0
DO46328
52 years, female, NA, stage:III, dead, 972 days
11801.4
DO46602
74 years, female, NA, stage:III, dead, 205 days
11603.7
DO46338
59 years, female, NA, stage:III, dead, 596 days
11378.2
DO46493
62 years, female, NA, stage:IV, alive, 839 days
11112.9
DO46568
66 years, female, NA, stage:III, dead, 320 days
10732.0
DO46394
61 years, female, NA, stage:IV, dead, 1039 days
10533.8
DO46392
48 years, female, NA, stage:III, dead, 628 days
10365.4
DO46368
57 years, female, NA, stage:III, dead, 2879 days
10332.9
DO46448
45 years, female, NA, stage:III, dead, 654 days
10136.1
DO46376
58 years, female, NA, stage:III, dead, 1430 days
9700.8
DO46586
55 years, female, NA, stage:III, dead, 1019 days
9577.7
DO46384
55 years, female, NA, stage:III, dead, 614 days
9539.5
DO46412
64 years, female, NA, stage:III, dead, 597 days
9050.5
DO46390
65 years, female, NA, stage:III, dead, 374 days
8619.8
DO46402
77 years, female, NA, stage:III, dead, 511 days
8339.7
DO46388
74 years, female, NA, stage:III, dead, 413 days
7474.5
DO46581
66 years, female, NA, stage:III, dead, 408 days
7265.1
DO46352
60 years, female, NA, stage:III, dead, 677 days
6898.8
DO46350
66 years, female, NA, stage:III, dead, 886 days
6227.1
DO46576
75 years, female, NA, stage:III, alive, 133 days
6036.9
DO46432
56 years, female, NA, stage:III, alive, 2218 days
5950.8
DO46611
52 years, female, NA, stage:III, dead, 734 days
5759.6
DO46333
58 years, female, NA, stage:III, dead, 359 days
5478.1
DO46366
65 years, female, NA, stage:III, dead, 2054 days
5317.9
DO46380
51 years, female, NA, stage:III, dead, 1423 days
4492.2
DO46356
68 years, female, NA, stage:III, dead, 911 days
4418.5
DO46591
58 years, female, NA, stage:III, dead, 195 days
2703.9
DO46453
66 years, female, NA, stage:III, dead, 3294 days
2634.8
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
N/A
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
N/A
21efd60f-6a31-4b98-9477-16a905_D2
Normal
N/A
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
N/A
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
N/A
285fed94-1495-448e-879b-b55de9_D2
Tumor
N/A
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
N/A
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
N/A
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
N/A
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
N/A
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
N/A
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
N/A
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
N/A
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
N/A
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
N/A
2f901c90-617e-46da-9fac-d68369_D2
Tumor
N/A
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
N/A
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
N/A
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
N/A
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
N/A
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
N/A
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
N/A
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
N/A
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
N/A
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
N/A
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
N/A
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
N/A
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
N/A
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
N/A
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
N/A
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
N/A
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
N/A
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
N/A
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
N/A
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
N/A
1772e913-f62e-446a-8cf3-720348_D2
Tumor
N/A
e9d416e7-f661-400a-896e-388545_D2
Tumor
N/A
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
N/A
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
N/A
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
N/A
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
N/A
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
N/A
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
N/A
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
N/A
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
N/A
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
N/A
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
N/A
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
N/A
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
N/A
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
N/A
10c2d629-0287-4511-ac25-f29031_D2
Tumor
N/A
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
N/A
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
N/A
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
N/A
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
N/A
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
N/A
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
N/A
340a3769-3031-41ae-bb08-a2f696_D2
Normal
N/A
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
N/A
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
N/A
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
N/A
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
N/A
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
N/A
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
N/A
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
N/A
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
N/A
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
N/A
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
N/A
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
N/A
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
N/A
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
N/A
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
N/A
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
N/A
15524912-685a-47ce-a824-567848_D2
Tumor
N/A
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
N/A
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
N/A
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
N/A
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
N/A
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
N/A
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
N/A
a3a26070-fb84-406a-8280-d555e6_D2
Normal
N/A
161317f3-1a39-438e-af45-cd2502_D2
Tumor
N/A
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
N/A
1db5574d-aca7-403c-8100-6e705f_D2
Normal
N/A
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
N/A
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
N/A
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
N/A
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
N/A
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
N/A
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
N/A
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
N/A
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
N/A
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
N/A
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
N/A
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
N/A
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
N/A
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
N/A
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
N/A
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
N/A
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
N/A
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
N/A
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
N/A
a65d8e76-640f-4341-a561-afbb57_D2
Normal
N/A
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
N/A
1a10c200-3895-4648-b951-94f99f_D2
Tumor
N/A
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
N/A
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
N/A
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
N/A
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
