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MT-ND3
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  • MT-ND3
CANCER LUNG CANCER Show tissue menu
BREAST CANCER CARCINOID CERVICAL CANCER COLORECTAL CANCER ENDOMETRIAL CANCER GLIOMA HEAD AND NECK CANCER LIVER CANCER LUNG CANCER LYMPHOMA
MELANOMA OVARIAN CANCER PANCREATIC CANCER PROSTATE CANCER RENAL CANCER SKIN CANCER STOMACH CANCER TESTIS CANCER THYROID CANCER UROTHELIAL CANCER
LUAD TCGA LUAD VALIDATION LUSC TCGA LUSC VALIDATION PROTEIN LUAD CPTAC PROTEIN LUSC CPTAC PROTEIN EXPRESSION
ANTIBODIES
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Dictionary
Lung cancer
Human cancer
Lung adenocarcinoma
Lung squamous cell carcinoma
LUNG ADENOCARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-ND3 is not prognostic in Lung Adenocarcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 8632.71
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 7899.7
Number of samples 497
Samples
Sample Description pTPM
TCGA-49-4514-01A 79 years, female, white, stage:Stage IA, alive, 1700 days 43475.5
TCGA-L4-A4E5-01A 48 years, female, white, stage:Stage I, alive, 578 days 35599.8
TCGA-78-7535-01A 45 years, male, white, stage:Stage IB, dead, 949 days 31851.2
TCGA-55-7576-01A 54 years, male, black or african american, stage:Stage IB, alive, 670 days 31711.5
TCGA-75-6214-01A female, stage:Stage IIIA, dead, 1115 days 26817.7
TCGA-55-6984-01A 71 years, female, white, stage:Stage IIB, dead, 760 days 23141.9
TCGA-49-AARQ-01A 41 years, female, black or african american, stage:Stage I, alive, 6732 days 22936.0
TCGA-62-A46R-01A 54 years, female, white, stage:Stage IB, dead, 1725 days 21883.6
TCGA-78-7153-01A 65 years, female, white, stage:Stage IB, alive, 3635 days 21477.4
TCGA-NJ-A4YF-01A 50 years, female, black or african american, stage:Stage IA, alive, 2161 days 20914.8
TCGA-86-A4D0-01A 48 years, male, white, stage:Stage IIA, dead, 116 days 20565.2
TCGA-38-4628-01A 65 years, female, white, stage:Stage IIB, dead, 1492 days 20354.6
TCGA-55-7907-01A 77 years, male, white, stage:Stage IIA, dead, 343 days 19941.3
TCGA-95-A4VP-01A 66 years, female, white, stage:Stage IIIA, alive, 605 days 19776.7
TCGA-38-A44F-01A 80 years, male, white, stage:Stage IB, alive, 133 days 19638.0
TCGA-NJ-A55R-01A 67 years, male, white, stage:Stage IA, alive, 603 days 19406.3
TCGA-49-4512-01A 69 years, female, white, stage:Stage IIIA, dead, 905 days 19019.6
TCGA-78-7540-01A 66 years, female, white, stage:Stage IB, dead, 1197 days 18776.2
TCGA-55-6985-01A 58 years, female, white, stage:Stage IB, alive, 1233 days 18736.9
TCGA-78-7166-01A 84 years, male, white, stage:Stage IIB, dead, 258 days 18401.5
TCGA-75-7025-01A male, stage:Stage IB, alive, 3305 days 18281.0
TCGA-53-A4EZ-01A 63 years, male, white, stage:Stage IIA, alive, 1071 days 18260.3
TCGA-62-8397-01A 70 years, female, white, stage:Stage IIB, alive, 1289 days 18166.1
TCGA-55-7281-01A 70 years, female, white, stage:Stage IA, alive, 872 days 18000.5
TCGA-97-A4M1-01A 52 years, female, white, stage:Stage IA, alive, 601 days 17169.0
TCGA-53-7813-01A 51 years, female, white, stage:Stage IIIB, alive, 424 days 17136.4
TCGA-55-5899-01A 58 years, male, white, stage:'--, alive, 930 days 17057.8
TCGA-95-A4VK-01A 74 years, female, white, stage:Stage IIIA, alive, 651 days 16978.5
TCGA-93-7348-01A 75 years, female, white, stage:Stage IA, alive, 531 days 16724.7
TCGA-55-8510-01A 55 years, female, white, stage:Stage IB, alive, 539 days 16472.7
TCGA-J2-A4AD-01A 61 years, female, white, stage:Stage IA, dead, 550 days 16315.6
TCGA-97-7937-01A 65 years, male, white, stage:Stage IB, alive, 564 days 16154.2
TCGA-49-AAR2-01A 64 years, male, black or african american, stage:Stage IB, alive, 2224 days 16133.5
TCGA-55-7724-01A 76 years, female, white, stage:Stage IB, alive, 705 days 15930.9
TCGA-MP-A4T8-01A 68 years, male, stage:Stage IIIA, dead, 161 days 15822.3
TCGA-62-A46P-01A 65 years, male, white, stage:Stage IB, dead, 594 days 15802.1
TCGA-95-7043-01A 63 years, female, white, stage:Stage IA, dead, 503 days 15663.9
TCGA-95-7944-01A 71 years, male, white, stage:Stage IA, alive, 377 days 15529.6
TCGA-55-A48Y-01A 69 years, male, white, stage:Stage IIA, alive, 630 days 15082.1
TCGA-MN-A4N1-01A 60 years, male, black or african american, stage:Stage IIA, alive, 827 days 15037.0
TCGA-55-7726-01A 72 years, female, white, stage:Stage IA, alive, 652 days 14785.3
TCGA-38-7271-01A 72 years, female, white, stage:Stage IA, dead, 800 days 14724.2
TCGA-49-4505-01A 61 years, female, white, stage:Stage IIB, dead, 428 days 14694.2
TCGA-55-8619-01A 72 years, female, white, stage:Stage IIB, alive, 416 days 14627.0
TCGA-97-A4M2-01A 66 years, male, white, stage:Stage IA, alive, 624 days 14562.2
TCGA-49-4490-01A 45 years, female, white, stage:Stage IIIA, dead, 385 days 14492.8
TCGA-55-A57B-01A 80 years, female, black or african american, stage:Stage IA, alive, 546 days 14289.0
TCGA-55-7727-01A 70 years, male, white, stage:Stage IIIA, alive, 119 days 14222.1
TCGA-49-6742-01A 70 years, male, white, stage:Stage IIA, dead, 488 days 14158.5
TCGA-50-5044-01A 72 years, female, white, stage:Stage IIIB, dead, 624 days 13911.3
TCGA-62-A470-01A 84 years, male, white, stage:Stage IB, dead, 1194 days 13830.6
TCGA-50-5944-01A 69 years, female, white, stage:Stage IA, alive, 1750 days 13784.9
TCGA-55-1592-01A 65 years, male, white, stage:Stage IA, dead, 701 days 13617.7
TCGA-69-7760-01A 73 years, male, white, stage:Stage IIB, alive, 202 days 13486.3
TCGA-97-8179-01A 72 years, male, white, stage:Stage IA, alive, 435 days 13484.5
TCGA-55-A4DG-01A 71 years, male, white, stage:Stage IA, alive, 608 days 13483.0
TCGA-J2-A4AE-01A 77 years, female, white, stage:Stage IA, alive, 1079 days 13478.5
TCGA-55-8514-01A 70 years, female, black or african american, stage:Stage IB, alive, 520 days 13389.1
TCGA-55-7227-01A 77 years, male, white, stage:Stage IIIA, dead, 952 days 13352.9
TCGA-55-6981-01A 53 years, female, white, stage:Stage IIIA, dead, 1379 days 13349.4
TCGA-NJ-A55O-01A 56 years, female, white, stage:Stage IIA, alive, 13 days 13262.9
TCGA-64-5779-01A 61 years, male, white, stage:Stage IIIA, alive, 864 days 13258.7
TCGA-55-A494-01A 61 years, female, white, stage:Stage IB, alive, 481 days 13238.1
TCGA-44-7667-01A 49 years, female, white, stage:Stage IIB, alive, 1097 days 13160.5
TCGA-55-7728-01A 64 years, female, white, stage:Stage IB, alive, 704 days 13124.0
TCGA-86-A4P8-01A 59 years, female, white, stage:Stage IIIA, alive, 805 days 13026.3
TCGA-62-A46O-01A 65 years, female, white, stage:Stage IB, dead, 1454 days 13006.1
TCGA-78-7149-01A 71 years, male, white, stage:Stage IIIB, alive, 3940 days 12834.4
TCGA-99-8025-01A 72 years, female, black or african american, stage:Stage IIIA, alive, 1060 days 12720.2
TCGA-86-7711-01A 70 years, male, white, stage:Stage IIA, dead, 1046 days 12490.0
TCGA-62-A46S-01A 73 years, male, white, stage:Stage IB, dead, 1653 days 12427.6
TCGA-86-A456-01A 78 years, female, asian, stage:Stage IA, alive, 896 days 12283.7
TCGA-50-5946-01A 62 years, male, white, stage:Stage IA, alive, 1617 days 12267.3
TCGA-97-7546-01A 76 years, female, white, stage:Stage IA, alive, 1285 days 12260.6
TCGA-50-6597-01A 79 years, female, white, stage:Stage IB, dead, 1268 days 12235.7
TCGA-55-8512-01A 41 years, male, white, stage:Stage IV, dead, 607 days 12209.8
TCGA-99-AA5R-01A 70 years, female, black or african american, stage:Stage IA, alive, 658 days 12194.4
TCGA-55-7910-01A 50 years, female, black or african american, stage:Stage IIA, alive, 1040 days 12165.8
TCGA-L9-A7SV-01A 69 years, male, black or african american, stage:Stage IIA, alive, 565 days 12134.7
TCGA-55-A492-01A 70 years, female, white, stage:Stage IA, alive, 596 days 12066.6
TCGA-50-7109-01A 60 years, male, white, stage:Stage IA, dead, 308 days 11899.9
TCGA-44-6148-01A 60 years, male, white, stage:Stage IA, alive, 704 days 11834.1
TCGA-71-6725-01A 48 years, female, asian, stage:Stage IB, alive, 256 days 11801.8
TCGA-NJ-A4YQ-01A 69 years, female, white, stage:Stage IA, alive, 1432 days 11683.2
TCGA-55-8507-01A 53 years, male, white, stage:Stage IA, alive, 418 days 11549.3
TCGA-49-6744-01A 64 years, female, white, stage:Stage IIA, alive, 1683 days 11509.4
TCGA-L9-A444-01A 60 years, female, white, stage:Stage IA, alive, 307 days 11490.0
TCGA-73-4666-01A 52 years, female, white, stage:Stage IV, alive, 800 days 11470.6
TCGA-55-A491-01A 81 years, female, white, stage:Stage IA, alive, 626 days 11458.2
TCGA-50-5051-01A 42 years, female, white, stage:Stage IIIA, dead, 478 days 11432.5
TCGA-49-AAR3-01A 69 years, male, black or african american, stage:Stage IIB, alive, 1893 days 11347.6
TCGA-55-8206-01A 56 years, male, white, stage:Stage IA, alive, 888 days 11321.0
TCGA-44-5644-01A 51 years, female, white, stage:Stage IB, alive, 863 days 11266.2
TCGA-L9-A443-01A 63 years, female, white, stage:Stage IA, dead, 193 days 11160.1
TCGA-86-8359-01A 52 years, male, white, stage:Stage IIIA, dead, 444 days 11146.9
TCGA-44-A4SU-01A 67 years, female, white, stage:Stage IA, dead, 409 days 11015.8
TCGA-55-8513-01A 77 years, female, white, stage:Stage IIB, alive, 791 days 10928.7
TCGA-55-7816-01A 49 years, female, white, stage:Stage IV, dead, 468 days 10893.1
TCGA-44-6776-01A 60 years, female, white, stage:Stage IA, alive, 2616 days 10860.9
TCGA-55-8616-01A 58 years, female, white, stage:Stage IB, alive, 48 days 10855.0
TCGA-NJ-A55A-01A 76 years, female, white, stage:Stage IB, alive, 15 days 10813.6
TCGA-55-6980-01A 56 years, male, white, stage:Stage IA, alive, 2109 days 10760.5
TCGA-49-AARE-01A 51 years, female, black or african american, stage:Stage IA, dead, 1229 days 10742.1
TCGA-MP-A5C7-01A 76 years, female, white, stage:Stage IB, alive, 2248 days 10666.3
TCGA-L4-A4E6-01A 67 years, male, white, stage:Stage IA, alive, 435 days 10660.2
TCGA-78-7156-01A 62 years, male, white, stage:Stage IV, dead, 976 days 10653.0
TCGA-73-4668-01A 66 years, female, american indian or alaska native, stage:Stage IIB, alive, 467 days 10646.1
TCGA-MP-A4TE-01A 56 years, male, white, stage:Stage IIA, dead, 896 days 10641.6
TCGA-50-5932-01A 75 years, male, white, stage:Stage IIB, dead, 1235 days 10639.5
TCGA-69-7979-01A 71 years, female, white, stage:Stage IB, alive, 408 days 10447.6
TCGA-97-8552-01A 55 years, female, white, stage:Stage I, alive, 626 days 10446.2
TCGA-75-7027-01A male, stage:Stage IB, alive, 3059 days 10410.3
TCGA-99-8032-01A 61 years, male, white, stage:Stage IA, alive, 44 days 10398.0
TCGA-73-4675-01A 59 years, male, white, stage:Stage IIIA, dead, 922 days 10308.7
TCGA-55-8615-01A 67 years, male, white, stage:Stage IIIA, alive, 446 days 10291.0
TCGA-49-AARO-01A 39 years, female, black or african american, stage:Stage IA, alive, 3759 days 10243.1
TCGA-62-8399-01A 62 years, male, white, stage:Stage IIIA, alive, 2696 days 10180.0
TCGA-91-7771-01A 62 years, male, white, stage:Stage IIB, alive, 492 days 10158.0
TCGA-78-7155-01A 68 years, male, white, stage:Stage IB, dead, 1171 days 10094.7
TCGA-L9-A50W-01A 75 years, male, black or african american, stage:Stage IIA, dead, 442 days 10032.1
TCGA-44-2659-01A 65 years, female, white, stage:Stage IIB, alive, 1367 days 10001.7
TCGA-91-6840-01A 59 years, female, white, stage:Stage IA, alive, 372 days 9940.7
TCGA-55-8505-01A 62 years, male, white, stage:Stage IIIA, alive, 440 days 9923.7
TCGA-97-8547-01A 78 years, female, stage:Stage IIIA, alive, 657 days 9882.5
TCGA-44-6779-01A 50 years, female, white, stage:Stage IIB, dead, 500 days 9822.3
TCGA-J2-A4AG-01A 66 years, female, white, stage:Stage IA, alive, 988 days 9792.9
TCGA-97-A4M3-01A 69 years, female, white, stage:Stage IA, alive, 540 days 9757.5
TCGA-62-8402-01A 73 years, female, white, stage:Stage IIIA, dead, 1498 days 9729.0
TCGA-86-8358-01A 44 years, male, white, stage:Stage IB, alive, 653 days 9726.2
TCGA-44-7660-01A 72 years, male, white, stage:Stage IB, alive, 592 days 9717.0
TCGA-MP-A4SW-01A 53 years, male, white, stage:Stage IIB, dead, 1778 days 9621.5
TCGA-55-6970-01A 67 years, female, white, stage:Stage IIIA, dead, 464 days 9608.9
TCGA-MP-A4T9-01A 54 years, female, white, stage:Stage IIIA, dead, 1265 days 9588.1
TCGA-55-8094-01A 51 years, male, white, stage:Stage IV, alive, 541 days 9519.2
TCGA-NJ-A4YI-01A 87 years, female, white, stage:Stage IIIA, dead, 4 days 9475.1
TCGA-50-5072-01A 74 years, male, white, stage:Stage IIIA, dead, 250 days 9462.8
TCGA-55-A48X-01A 63 years, female, white, stage:Stage IIA, alive, 689 days 9423.2
TCGA-93-A4JO-01A 70 years, male, white, stage:Stage IA, dead, 33 days 9380.7
TCGA-91-A4BC-01A 59 years, male, white, stage:Stage IIA, alive, 44 days 9374.5
TCGA-55-7815-01A 76 years, male, stage:Stage IB, alive, 773 days 9280.7
TCGA-62-A471-01A 64 years, male, white, stage:Stage IIB, alive, 1246 days 9264.0
TCGA-55-6987-01A 77 years, male, white, stage:Stage IA, alive, 2137 days 9203.1
TCGA-86-8673-01A 61 years, male, white, stage:Stage IB, alive, 862 days 9133.1
TCGA-MP-A4TD-01A 71 years, male, white, stage:Stage IIIA, dead, 307 days 9054.0
TCGA-50-8459-01A 68 years, male, white, stage:Stage IIB, alive, 1119 days 9004.7
TCGA-93-A4JP-01A 64 years, male, asian, stage:Stage IV, alive, 578 days 8991.5
TCGA-86-A4P7-01A 63 years, female, white, stage:Stage IB, alive, 415 days 8976.2
TCGA-93-A4JQ-01A 49 years, male, white, stage:Stage IA, alive, 526 days 8934.5
TCGA-97-A4M6-01A 45 years, female, white, stage:Stage IA, alive, 568 days 8928.1
TCGA-38-4626-01A 57 years, female, white, stage:'--, alive, 3674 days 8909.2
TCGA-80-5608-01A female, stage:Stage IA, alive, 2832 days 8846.2
TCGA-95-A4VN-01A 62 years, female, white, stage:Stage IIA, alive, 553 days 8843.9
TCGA-78-8640-01A 59 years, male, stage:Stage IIA, alive, 7062 days 8839.9
TCGA-44-A4SS-01A 73 years, male, white, stage:Stage IA, alive, 415 days 8835.6
TCGA-91-6847-01A 62 years, female, white, stage:Stage IB, alive, 842 days 8828.0
TCGA-73-A9RS-01A 41 years, male, black or african american, stage:Stage IIB, dead, 340 days 8827.3
TCGA-MN-A4N4-01A 57 years, male, white, stage:Stage IA, alive, 1175 days 8826.7
TCGA-97-A4M7-01A 74 years, male, white, stage:Stage IA, alive, 629 days 8822.6
TCGA-75-6212-01A female, stage:Stage IIB, dead, 1516 days 8788.0
TCGA-97-8171-01A 81 years, male, asian, stage:Stage IV, alive, 568 days 8771.2
TCGA-99-7458-01A 74 years, female, white, stage:Stage IIIA, alive, 747 days 8751.5
TCGA-95-7947-01A 67 years, male, white, stage:Stage IA, alive, 477 days 8741.5
TCGA-49-AARR-01A 68 years, male, black or african american, stage:Stage IA, alive, 4992 days 8728.5
TCGA-69-8453-01A 77 years, male, white, stage:Stage IIB, alive, 813 days 8724.6
TCGA-86-8669-01A 64 years, male, white, stage:Stage IA, alive, 938 days 8704.1
TCGA-97-A4M0-01A 60 years, female, white, stage:Stage IB, alive, 652 days 8632.7
TCGA-86-A4JF-01A 56 years, male, white, stage:Stage IIB, dead, 737 days 8622.2
TCGA-64-1681-01A 61 years, female, white, stage:Stage IA, dead, 1167 days 8598.8
TCGA-69-8254-01A 85 years, male, white, stage:'--, alive, 409 days 8513.2
TCGA-86-8279-01A 46 years, male, white, stage:Stage IIA, alive, 949 days 8504.1
TCGA-MN-A4N5-01A 63 years, male, white, stage:Stage IA, alive, 84 days 8442.5
TCGA-50-6591-01A 63 years, female, white, stage:Stage IV, dead, 119 days 8415.0
TCGA-55-8090-01A 80 years, male, white, stage:Stage IA, dead, 598 days 8398.9
TCGA-86-7955-01A 62 years, male, white, stage:Stage IB, alive, 1072 days 8377.3
TCGA-55-8299-01A 61 years, female, white, stage:Stage IA, dead, 469 days 8368.2
TCGA-97-A4M5-01A 83 years, male, white, stage:Stage IA, alive, 634 days 8366.3
TCGA-44-2665-01A 55 years, female, white, stage:Stage IIB, alive, 1301 days 8285.2
TCGA-05-4420-01A 41 years, male, stage:Stage IB, alive, 912 days 8282.2
TCGA-49-AAQV-01A 63 years, female, black or african american, stage:Stage II, dead, 677 days 8249.3
TCGA-50-6673-01A 84 years, female, white, stage:Stage I, dead, 22 days 8230.7
TCGA-86-6562-01A 52 years, male, white, stage:Stage IIA, dead, 376 days 8175.9
TCGA-44-A47G-01A 73 years, female, white, stage:Stage IA, alive, 351 days 8160.8
TCGA-55-8091-01A 74 years, male, white, stage:Stage IB, alive, 600 days 8132.8
TCGA-55-A493-01A 54 years, female, white, stage:Stage IB, alive, 28 days 8104.1
TCGA-78-8662-01A 53 years, female, stage:Stage IB, dead, 3361 days 8089.2
TCGA-50-6594-01A 79 years, female, black or african american, stage:Stage IIIA, dead, 370 days 8081.8
TCGA-62-A46Y-01A 70 years, female, white, stage:Stage IIIA, dead, 414 days 8041.7
TCGA-MP-A4T7-01A 75 years, female, stage:Stage IV, dead, 167 days 8029.1
TCGA-55-8614-01A 76 years, male, white, stage:Stage IB, alive, 536 days 7998.7
TCGA-38-4627-01A 64 years, female, white, stage:Stage IIA, dead, 1147 days 7997.7
TCGA-55-A4DF-01A 88 years, male, white, stage:Stage IA, dead, 440 days 7977.3
TCGA-49-4487-01A 72 years, female, white, stage:Stage IA, dead, 855 days 7973.0
TCGA-49-6761-01A 68 years, female, white, stage:Stage IIIA, alive, 354 days 7941.0
TCGA-62-A472-01A 70 years, male, white, stage:Stage IIB, alive, 910 days 7920.6
TCGA-95-7039-01A 54 years, female, white, stage:Stage IIB, alive, 1272 days 7916.6
TCGA-MP-A4SV-01A 67 years, male, stage:Stage IB, dead, 2620 days 7911.7
TCGA-55-7903-01A 64 years, male, white, stage:Stage IA, alive, 567 days 7834.2
TCGA-O1-A52J-01A 74 years, female, white, stage:Stage IA, dead, 1798 days 7768.0
TCGA-73-4677-01A 74 years, male, white, stage:'--, dead, 38 days 7748.7
TCGA-67-3772-01A 82 years, female, white, stage:Stage IB, alive, 573 days 7740.7
TCGA-62-A46V-01A 78 years, female, white, stage:Stage IB, alive, 2199 days 7736.3
TCGA-49-6767-01A 46 years, female, white, stage:Stage IIB, alive, 677 days 7702.8
TCGA-55-8621-01A 75 years, female, white, stage:Stage IA, alive, 515 days 7694.0
TCGA-78-7536-01A 69 years, male, white, stage:Stage IIIA, dead, 244 days 7618.1
TCGA-97-8175-01A 55 years, female, white, stage:Stage IB, alive, 551 days 7610.4
TCGA-MP-A4T6-01A 76 years, female, white, stage:Stage IIIA, dead, 1790 days 7595.6
TCGA-44-6774-01A 56 years, female, white, stage:Stage IIIA, alive, 658 days 7594.8
TCGA-55-8096-01A 67 years, female, white, stage:Stage IB, dead, 719 days 7559.1
TCGA-73-4676-01A 45 years, male, white, stage:Stage IIA, dead, 281 days 7552.0
TCGA-86-8671-01A 72 years, female, white, stage:Stage IIB, alive, 839 days 7543.9
TCGA-50-8457-01A 63 years, female, black or african american, stage:Stage IA, alive, 1125 days 7536.5
TCGA-91-6830-01A 65 years, female, white, stage:Stage IIA, alive, 60 days 7536.3
TCGA-97-8176-01A 63 years, male, white, stage:Stage IIIA, dead, 468 days 7497.4
TCGA-69-8253-01A 59 years, female, black or african american, stage:Stage IIA, alive, 426 days 7477.2
TCGA-91-8497-01A 75 years, female, white, stage:Stage IA, dead, 434 days 7454.5
TCGA-69-7763-01A 69 years, male, white, stage:Stage IA, alive, 690 days 7423.2
TCGA-91-A4BD-01A 78 years, male, white, stage:Stage IIA, alive, 603 days 7419.9
TCGA-55-6975-01A 61 years, male, white, stage:Stage IIB, dead, 118 days 7415.5
TCGA-55-6968-01A 61 years, male, white, stage:Stage IV, dead, 1293 days 7400.7
TCGA-05-4424-01A 70 years, male, stage:Stage IIB, alive, 913 days 7390.2
TCGA-55-7995-01A 73 years, female, white, stage:Stage IA, alive, 889 days 7376.8
TCGA-86-7714-01A 61 years, female, black or african american, stage:Stage IIIA, dead, 625 days 7358.4
TCGA-J2-8192-01A 65 years, female, white, stage:Stage IIA, alive, 739 days 7357.4
TCGA-55-6983-01A 81 years, male, white, stage:Stage IIB, alive, 2823 days 7330.0
TCGA-44-8119-01A 73 years, male, white, stage:Stage IIB, alive, 285 days 7315.3
TCGA-44-2666-01A 43 years, male, white, stage:Stage IB, dead, 97 days 7298.0
TCGA-69-7765-01A 56 years, male, black or african american, stage:'--, alive, 165 days 7294.1
TCGA-44-6147-01A 67 years, female, white, stage:Stage IA, alive, 845 days 7290.8
TCGA-44-7670-01A 47 years, female, white, stage:Stage IIA, alive, 882 days 7256.5
TCGA-49-4507-01A 73 years, female, white, stage:Stage IIIA, dead, 268 days 7179.7
TCGA-78-7148-01A 71 years, male, white, stage:Stage IIB, dead, 626 days 7171.6
TCGA-86-8668-01A 61 years, female, white, stage:Stage IA, alive, 423 days 7165.1
TCGA-49-AAR0-01A 57 years, male, black or african american, stage:Stage IA, alive, 4765 days 7162.2
TCGA-55-7725-01A 68 years, female, white, stage:Stage IA, alive, 442 days 7159.0
TCGA-49-AAR4-01A 51 years, male, black or african american, stage:Stage IIIA, dead, 879 days 7103.4
TCGA-78-7161-01A 69 years, female, white, stage:Stage IIB, dead, 291 days 7088.0
TCGA-MP-A4TI-01A 72 years, male, white, stage:Stage IIA, dead, 429 days 7028.0
TCGA-62-8394-01A 65 years, female, white, stage:Stage IIIB, dead, 139 days 7007.3
TCGA-91-6849-01A 75 years, female, black or african american, stage:Stage IIIA, alive, 35 days 6992.1
TCGA-78-7154-01A 72 years, male, white, stage:Stage IIIA, dead, 593 days 6990.4
TCGA-97-7547-01A 67 years, female, white, stage:Stage IB, alive, 1965 days 6987.7
TCGA-78-7158-01A 59 years, female, white, stage:Stage IIIB, dead, 179 days 6980.6
TCGA-55-6712-01A 71 years, male, white, stage:Stage IIA, dead, 171 days 6976.8
TCGA-55-6979-01A 59 years, female, white, stage:Stage IIB, dead, 237 days 6952.0
TCGA-67-6217-01A 73 years, female, white, stage:Stage IIA, alive, 422 days 6936.6
TCGA-55-7570-01A 60 years, male, black or african american, stage:Stage IA, alive, 824 days 6928.0
TCGA-55-8097-01A 60 years, female, white, stage:Stage IA, alive, 476 days 6902.9
TCGA-55-7574-01A 64 years, female, white, stage:Stage IB, dead, 995 days 6838.7
TCGA-78-7150-01A 59 years, male, white, stage:Stage IIB, dead, 666 days 6813.4
TCGA-97-7941-01A 72 years, female, white, stage:Stage IA, alive, 484 days 6788.7
TCGA-53-7626-01A 76 years, female, white, stage:Stage IIA, dead, 929 days 6779.8
TCGA-78-8660-01A 69 years, male, stage:Stage IIB, dead, 321 days 6736.7
TCGA-44-8117-01A 54 years, female, white, stage:Stage IB, alive, 385 days 6644.2
TCGA-NJ-A4YG-01A 65 years, male, white, stage:Stage IB, alive, 2261 days 6634.7
TCGA-55-A490-01A 78 years, male, white, stage:Stage IIA, dead, 99 days 6630.2
TCGA-93-7347-01A 76 years, female, white, stage:Stage IA, alive, 683 days 6630.0
TCGA-05-4434-01A 67 years, female, stage:Stage IV, dead, 457 days 6623.3
TCGA-69-7980-01A 70 years, female, white, stage:Stage I, alive, 411 days 6613.0
TCGA-05-4427-01A 65 years, female, stage:Stage IIB, alive, 791 days 6602.6
TCGA-86-7953-01A 69 years, female, white, stage:Stage IA, alive, 997 days 6599.0
TCGA-MP-A4TA-01A 75 years, female, white, stage:Stage IA, dead, 950 days 6563.9
TCGA-69-7764-01A 75 years, male, white, stage:Stage IA, alive, 414 days 6563.1
TCGA-50-6593-01A 49 years, female, white, stage:Stage IIIA, dead, 336 days 6546.9
TCGA-55-8302-01A 54 years, male, white, stage:Stage IB, alive, 478 days 6519.0
TCGA-MP-A4TK-01A 56 years, female, stage:Stage IIB, dead, 582 days 6500.2
TCGA-97-8172-01A 75 years, female, white, stage:Stage IB, alive, 545 days 6494.2
TCGA-MP-A4T4-01A 68 years, female, white, stage:Stage IIB, dead, 2617 days 6492.0
TCGA-55-7283-01A 76 years, female, white, stage:Stage IIIA, alive, 609 days 6491.8
TCGA-55-8085-01A 64 years, male, white, stage:Stage IA, alive, 904 days 6490.1
TCGA-55-8208-01A 73 years, female, white, stage:Stage IA, alive, 674 days 6434.7
TCGA-MP-A4TH-01A 70 years, female, white, stage:Stage IA, alive, 741 days 6298.4
TCGA-MP-A4SY-01A 61 years, male, white, stage:Stage IIB, dead, 1501 days 6296.7
TCGA-73-4662-01A 65 years, female, white, stage:Stage IA, alive, 2515 days 6278.9
TCGA-05-4403-01A 76 years, male, stage:Stage IB, alive, 578 days 6261.1
TCGA-44-2655-01A 65 years, female, white, stage:Stage IA, alive, 1324 days 6259.1
TCGA-97-8177-01A 59 years, female, white, stage:Stage IB, alive, 499 days 6244.5
TCGA-44-7659-01A 70 years, male, white, stage:Stage IA, alive, 691 days 6243.7
TCGA-55-A48Z-01A 60 years, female, white, stage:Stage IIIB, alive, 651 days 6230.4
TCGA-86-8585-01A 57 years, male, white, stage:Stage IB, alive, 353 days 6205.7
TCGA-69-8255-01A 71 years, male, white, stage:Stage IA, alive, 129 days 6204.2
TCGA-97-A4LX-01A 81 years, male, white, stage:Stage IB, alive, 614 days 6204.0
TCGA-MP-A4TF-01A 58 years, female, white, stage:Stage IIA, dead, 336 days 6190.1
TCGA-91-6829-01A 78 years, male, white, stage:Stage IB, dead, 1258 days 6177.9
TCGA-49-AARN-01A 56 years, female, black or african american, stage:Stage IA, dead, 1135 days 6170.5
TCGA-86-8073-01A 58 years, male, white, stage:Stage IB, alive, 740 days 6150.9
TCGA-93-8067-01A 77 years, male, asian, stage:Stage IB, alive, 186 days 6117.4
TCGA-55-6986-01A 74 years, female, white, stage:Stage IB, alive, 3261 days 6109.6
TCGA-50-8460-01A 74 years, male, white, stage:Stage IA, alive, 829 days 6098.8
TCGA-78-7160-01A 61 years, male, white, stage:Stage IV, dead, 697 days 6085.7
TCGA-78-7159-01A 60 years, female, white, stage:Stage IA, alive, 1974 days 6062.9
TCGA-S2-AA1A-01A 68 years, female, black or african american, stage:Stage IA, alive, 513 days 6044.3
TCGA-97-7938-01A 76 years, female, white, stage:Stage IA, dead, 18 days 6039.7
TCGA-78-7162-01A 75 years, male, white, stage:Stage IA, dead, 3169 days 6037.4
TCGA-75-5125-01A male, stage:Stage IIB, dead, 2027 days 5998.7
TCGA-49-4488-01A 74 years, female, white, stage:Stage IA, dead, 869 days 5969.7
TCGA-50-5936-01A 58 years, male, white, stage:Stage IIIA, dead, 257 days 5954.4
TCGA-78-7143-01A 62 years, female, white, stage:Stage IB, dead, 4961 days 5950.8
TCGA-49-4506-01A 68 years, female, white, stage:Stage IIB, dead, 999 days 5945.2
TCGA-55-8508-01A 60 years, female, black or african american, stage:Stage IIA, alive, 617 days 5935.2
TCGA-86-7701-01A 66 years, male, white, stage:Stage IV, alive, 947 days 5916.2
TCGA-49-4501-01A 67 years, female, white, stage:Stage IB, dead, 1421 days 5912.5
TCGA-71-8520-01A 60 years, female, asian, stage:Stage IB, dead, 210 days 5888.3
TCGA-62-8398-01A 55 years, male, white, stage:Stage IIIA, dead, 444 days 5879.4
TCGA-05-4389-01A 70 years, male, stage:Stage IA, alive, 1369 days 5866.7
TCGA-05-4432-01A 66 years, male, stage:Stage IIB, alive, 761 days 5815.5
TCGA-78-7167-01A 77 years, male, white, stage:Stage IV, dead, 2681 days 5788.8
TCGA-MP-A4TC-01A 77 years, male, white, stage:Stage IIIA, dead, 74 days 5769.1
TCGA-78-7152-01A 65 years, male, white, stage:Stage IB, dead, 1215 days 5763.2
TCGA-91-6828-01A 70 years, male, white, stage:Stage IA, alive, 323 days 5721.8
TCGA-86-8674-01A 50 years, male, white, stage:Stage IIA, alive, 806 days 5717.1
TCGA-73-4658-01A 80 years, female, white, stage:Stage IB, dead, 1600 days 5708.9
TCGA-55-8207-01A 73 years, male, white, stage:Stage IB, alive, 977 days 5699.5
TCGA-05-4405-01A 74 years, female, stage:Stage IB, alive, 610 days 5648.6
TCGA-50-5935-01A 86 years, female, white, stage:Stage IA, dead, 653 days 5639.1
TCGA-55-8087-01A 59 years, female, white, stage:Stage IB, alive, 462 days 5633.1
TCGA-44-2657-01A 74 years, female, white, stage:Stage IB, alive, 1351 days 5632.6
TCGA-64-1677-01A 77 years, female, white, stage:Stage IIIA, dead, 628 days 5622.9
TCGA-44-7672-01A 52 years, female, white, stage:Stage IA, alive, 719 days 5615.6
TCGA-05-4433-01A 82 years, male, stage:Stage IB, alive, 730 days 5577.9
TCGA-44-3396-01A 74 years, female, white, stage:Stage IIIA, alive, 1130 days 5547.1
TCGA-55-6543-01A 60 years, female, white, stage:Stage IA, alive, 435 days 5536.0
TCGA-50-5931-01A 75 years, female, white, stage:Stage IB, dead, 434 days 5504.9
TCGA-05-4396-01A 76 years, male, stage:Stage IIIB, dead, 303 days 5482.2
TCGA-64-5778-01A 60 years, male, white, stage:Stage IB, alive, 1305 days 5469.2
TCGA-86-8672-01A 59 years, male, white, stage:Stage IIB, dead, 19 days 5445.5
TCGA-44-7661-01A 69 years, female, white, stage:Stage IB, dead, 557 days 5390.3
TCGA-05-4384-01A 66 years, male, stage:Stage IIIA, alive, 426 days 5388.8
TCGA-55-8089-01A 56 years, male, white, stage:Stage IA, dead, 702 days 5301.2
TCGA-49-6745-01A 82 years, male, white, stage:Stage IIIA, alive, 522 days 5288.6
TCGA-78-7147-01A 67 years, female, white, stage:Stage IIB, dead, 586 days 5279.2
TCGA-78-7542-01A 56 years, male, white, stage:Stage IB, dead, 321 days 5275.6
TCGA-44-A47B-01A 79 years, male, white, stage:Stage IB, alive, 287 days 5273.0
TCGA-55-7573-01A 72 years, female, white, stage:Stage IA, alive, 487 days 5262.8
TCGA-38-4630-01A 75 years, female, white, stage:Stage IB, dead, 1073 days 5236.0
TCGA-93-A4JN-01A 71 years, male, white, stage:Stage IV, alive, 718 days 5220.5
TCGA-78-7537-01A 72 years, male, stage:Stage IB, dead, 1622 days 5205.8
TCGA-55-8620-01A 60 years, male, white, stage:Stage IV, dead, 375 days 5204.1
TCGA-05-4402-01A 57 years, female, stage:Stage IV, dead, 244 days 5134.7
TCGA-55-6972-01A 72 years, male, white, stage:Stage IB, dead, 1632 days 5119.5
TCGA-55-1596-01A 55 years, male, asian, stage:Stage IIB, alive, 2065 days 5118.5
TCGA-64-1679-01A 58 years, female, white, stage:Stage IIIA, alive, 2488 days 5103.8
TCGA-55-8203-01A 69 years, female, white, stage:Stage IA, alive, 547 days 5099.7
TCGA-50-5930-01A 47 years, male, white, stage:Stage IIIA, dead, 282 days 5096.3
TCGA-50-6595-01A 74 years, female, white, stage:Stage IIIA, dead, 189 days 5088.9
TCGA-95-8039-01A 72 years, male, white, stage:Stage IA, alive, 830 days 5029.9
TCGA-55-6978-01A 81 years, male, white, stage:Stage IIA, dead, 176 days 5009.7
TCGA-49-4486-01A 72 years, male, white, stage:Stage IA, dead, 2318 days 4999.9
TCGA-75-6206-01A male, stage:Stage IB, alive, 2590 days 4994.2
TCGA-78-7145-01A 52 years, female, white, stage:Stage IV, dead, 826 days 4986.1
TCGA-67-3774-01A 73 years, female, white, stage:Stage IB, alive, 385 days 4979.3
TCGA-49-4494-01A 77 years, male, white, stage:Stage IIIA, dead, 1081 days 4930.6
TCGA-78-7163-01A 60 years, male, white, stage:Stage IB, alive, 7248 days 4924.9
TCGA-05-4417-01A 51 years, female, stage:Stage IB, alive, 455 days 4869.0
TCGA-97-7553-01A 58 years, female, white, stage:Stage IA, alive, 1870 days 4845.0
TCGA-4B-A93V-01A 52 years, female, black or african american, stage:Stage IA, dead, 300 days 4834.8
TCGA-55-8204-01A 87 years, female, white, stage:Stage IB, alive, 515 days 4828.9
TCGA-99-8028-01A 50 years, female, black or african american, stage:Stage IA, alive, 1118 days 4821.6
TCGA-NJ-A7XG-01A 49 years, male, black or african american, stage:Stage IIIA, alive, 617 days 4779.0
TCGA-55-6982-01A 79 years, female, white, stage:Stage IIB, dead, 995 days 4767.9
TCGA-67-6215-01A 52 years, female, white, stage:Stage IB, alive, 174 days 4755.6
TCGA-50-5942-01A 67 years, female, white, stage:Stage IA, alive, 1847 days 4726.6
TCGA-NJ-A4YP-01A 52 years, male, white, stage:Stage IB, alive, 50 days 4717.1
TCGA-91-6831-01A 66 years, male, white, stage:Stage IB, alive, 310 days 4712.6
TCGA-44-7671-01A 64 years, male, black or african american, stage:Stage IB, alive, 889 days 4700.5
TCGA-05-4422-01A 68 years, male, stage:Stage IB, alive, 365 days 4695.1
TCGA-05-5715-01A 69 years, female, stage:Stage IB, alive, 62 days 4669.5
TCGA-78-7220-01A 53 years, female, white, stage:Stage IIIA, dead, 807 days 4657.9
TCGA-91-6836-01A 52 years, female, white, stage:Stage IB, alive, 417 days 4629.0
TCGA-86-8074-01A 62 years, female, white, stage:Stage IIA, alive, 24 days 4620.6
TCGA-91-6835-01A 81 years, female, white, stage:Stage IA, alive, 79 days 4595.5
TCGA-05-4249-01A 67 years, male, stage:Stage IB, alive, 1523 days 4589.9
TCGA-99-8033-01A 74 years, female, white, stage:Stage IV, dead, 656 days 4589.3
TCGA-44-3919-01A 71 years, female, white, stage:Stage IA, dead, 1026 days 4587.7
TCGA-55-8511-01A 73 years, female, white, stage:Stage IB, alive, 552 days 4568.5
TCGA-62-8395-01A 80 years, female, white, stage:Stage IIB, alive, 1216 days 4565.5
TCGA-38-4629-01A 68 years, male, white, stage:Stage IIB, dead, 864 days 4522.7
TCGA-35-4123-01A 38 years, male, white, stage:Stage IA, alive, 182 days 4516.8
TCGA-MP-A4TJ-01A 62 years, female, stage:Stage IA, dead, 339 days 4512.0
TCGA-44-6778-01A 59 years, male, black or african american, stage:Stage IA, alive, 1864 days 4510.5
TCGA-86-8278-01A 63 years, female, white, stage:Stage IIB, alive, 944 days 4510.2
TCGA-05-4397-01A 65 years, male, stage:Stage IIB, dead, 731 days 4496.4
TCGA-50-5933-01A 72 years, male, white, stage:Stage IIIB, dead, 2393 days 4488.1
TCGA-73-7498-01A 58 years, female, white, stage:Stage IA, alive, 1189 days 4480.3
TCGA-50-5941-01A 55 years, female, white, stage:Stage IIIA, alive, 1474 days 4465.4
TCGA-55-7994-01A 81 years, male, white, stage:Stage IIB, alive, 603 days 4450.7
TCGA-69-7978-01A 59 years, male, white, stage:Stage IIB, alive, 134 days 4447.7
TCGA-55-7911-01A 70 years, female, white, stage:Stage IA, alive, 537 days 4431.5
TCGA-05-4382-01A 68 years, male, stage:Stage IB, alive, 607 days 4431.0
TCGA-78-7539-01A 75 years, female, white, stage:Stage IIA, alive, 791 days 4415.0
TCGA-38-6178-01A 70 years, female, white, stage:Stage IIIA, alive, 448 days 4411.9
TCGA-44-2661-01A 69 years, female, white, stage:Stage IA, alive, 1159 days 4388.6
TCGA-78-8655-01A 77 years, female, stage:Stage IA, alive, 2360 days 4383.5
TCGA-97-7552-01A 70 years, male, white, stage:Stage IB, alive, 1932 days 4382.0
TCGA-44-A479-01A 73 years, female, black or african american, stage:Stage IB, alive, 486 days 4369.5
TCGA-73-7499-01A 81 years, female, white, stage:Stage IB, dead, 1531 days 4328.9
TCGA-L9-A8F4-01A 64 years, female, black or african american, stage:Stage IB, alive, 476 days 4283.7
TCGA-05-4430-01A 59 years, female, stage:Stage IB, alive, 761 days 4230.9
TCGA-38-4631-01A 72 years, female, white, stage:Stage IB, dead, 354 days 4208.0
TCGA-64-1680-01A 63 years, male, white, stage:Stage IV, alive, 1126 days 4196.2
TCGA-86-8056-01A 63 years, female, white, stage:Stage IIIA, alive, 139 days 4192.1
TCGA-44-8120-01A 58 years, male, black or african american, stage:Stage IB, alive, 260 days 4156.9
TCGA-95-7562-01A 71 years, male, black or african american, stage:Stage IIA, dead, 87 days 4103.5
TCGA-05-4415-01A 57 years, male, stage:Stage IIIB, dead, 91 days 4083.8
TCGA-44-7662-01A 61 years, male, white, stage:Stage IB, alive, 218 days 4063.5
TCGA-05-4418-01A 69 years, male, stage:Stage IIIA, dead, 274 days 4024.1
TCGA-86-8076-01A 42 years, male, white, stage:Stage IA, alive, 993 days 4007.1
TCGA-95-7567-01A 61 years, male, white, stage:Stage IIB, alive, 568 days 4003.7
TCGA-91-6848-01A 59 years, male, white, stage:Stage IIIA, alive, 224 days 4003.6
TCGA-50-6590-01A 72 years, female, white, stage:Stage IB, dead, 1288 days 3999.0
TCGA-67-6216-01A 57 years, female, white, stage:Stage IA, alive, 141 days 3986.6
TCGA-50-5939-01A 85 years, male, white, stage:Stage IB, dead, 460 days 3970.8
TCGA-86-6851-01A 73 years, female, white, stage:Stage IIA, alive, 179 days 3944.5
TCGA-67-3770-01A 70 years, female, white, stage:Stage IA, alive, 610 days 3871.2
TCGA-44-5643-01A 53 years, male, black or african american, stage:Stage IIIA, alive, 1013 days 3868.0
TCGA-64-1676-01A 58 years, male, white, stage:Stage IA, alive, 1728 days 3852.5
TCGA-95-8494-01A 67 years, male, white, stage:Stage IIA, alive, 84 days 3842.5
TCGA-38-4632-01A 42 years, male, black or african american, stage:Stage IV, dead, 1357 days 3835.6
TCGA-78-8648-01A 58 years, female, stage:Stage IIB, dead, 1209 days 3768.9
TCGA-73-4659-01A 66 years, male, white, stage:Stage IIIA, dead, 711 days 3762.9
TCGA-44-2668-01A 51 years, male, white, stage:Stage IB, dead, 761 days 3759.2
TCGA-44-7669-01A 59 years, male, black or african american, stage:Stage IIA, dead, 574 days 3754.4
TCGA-44-6777-01A 85 years, female, white, stage:Stage IB, dead, 987 days 3749.2
TCGA-55-8506-01A 62 years, female, white, stage:Stage IIB, alive, 11 days 3725.5
TCGA-53-7624-01A 40 years, female, white, stage:Stage IV, dead, 1043 days 3725.3
TCGA-55-8301-01A 58 years, male, white, stage:Stage IB, alive, 534 days 3705.6
TCGA-64-5815-01A 74 years, male, white, stage:Stage IIB, alive, 866 days 3664.7
TCGA-44-2656-01A 59 years, male, white, stage:Stage IB, alive, 1429 days 3662.9
TCGA-55-7914-01A 71 years, female, white, stage:Stage IIA, dead, 187 days 3619.7
TCGA-55-6971-01A 59 years, female, white, stage:Stage IB, alive, 1400 days 3513.6
TCGA-44-4112-01A 60 years, female, white, stage:Stage IB, dead, 808 days 3503.5
TCGA-55-6642-01A 63 years, male, white, stage:Stage IB, alive, 2449 days 3465.6
TCGA-69-7974-01A 54 years, female, white, stage:Stage IIIA, alive, 184 days 3454.2
TCGA-L9-A743-01A 56 years, male, black or african american, stage:Stage IIA, alive, 664 days 3442.2
TCGA-69-7973-01A 42 years, female, white, stage:Stage IB, alive, 230 days 3419.2
TCGA-49-4510-01A 51 years, female, black or african american, stage:Stage IIB, dead, 896 days 3402.4
TCGA-69-7761-01A 84 years, male, white, stage:Stage IB, alive, 186 days 3375.9
TCGA-86-7713-01A 70 years, male, white, stage:Stage IIA, alive, 1157 days 3341.7
TCGA-55-8205-01A 76 years, female, white, stage:Stage IIA, alive, 599 days 3331.7
TCGA-44-3918-01A 60 years, female, white, stage:Stage IA, alive, 1036 days 3311.5
TCGA-97-7554-01A 83 years, female, white, stage:Stage IIIA, alive, 775 days 3307.4
TCGA-95-7948-01A 42 years, female, white, stage:Stage IB, alive, 476 days 3250.9
TCGA-80-5611-01A male, stage:Stage IB, alive, 2595 days 3234.3
TCGA-49-AAR9-01A 61 years, male, black or african american, stage:Stage IIB, dead, 260 days 3224.9
TCGA-44-A47A-01A 78 years, female, white, stage:Stage IB, alive, 466 days 3200.6
TCGA-83-5908-01A 59 years, female, white, stage:Stage IA, alive, 824 days 3185.8
TCGA-86-8280-01A 54 years, female, white, stage:Stage IIA, alive, 701 days 3137.1
TCGA-91-8499-01A 76 years, female, white, stage:Stage IA, alive, 36 days 3066.6
TCGA-67-3771-01A 77 years, female, black or african american, stage:Stage IA, alive, 610 days 3060.1
TCGA-05-4390-01A 58 years, female, stage:Stage IB, alive, 1126 days 3050.7
TCGA-05-4250-01A 79 years, female, stage:Stage IIIA, dead, 121 days 3042.3
TCGA-86-8054-01A 61 years, male, white, stage:Stage IIB, alive, 1148 days 3038.5
TCGA-35-4122-01A 69 years, male, white, stage:Stage IA, alive, 225 days 3004.5
TCGA-86-8075-01A 66 years, female, white, stage:Stage IB, dead, 694 days 2991.6
TCGA-78-7633-01A 67 years, male, white, stage:Stage IB, dead, 1528 days 2902.1
TCGA-50-6592-01A 71 years, female, white, stage:Stage IB, dead, 777 days 2804.0
TCGA-55-8092-01A 75 years, male, white, stage:Stage IIB, dead, 154 days 2781.0
TCGA-05-5425-01A 68 years, male, stage:Stage IIB, alive, 882 days 2763.1
TCGA-64-1678-01A 70 years, female, white, stage:'--, alive, 1189 days 2705.0
TCGA-38-4625-01A 66 years, female, white, stage:Stage IB, alive, 2973 days 2677.8
TCGA-35-3615-01A 57 years, male, white, stage:Stage IB, alive, 14 days 2675.4
TCGA-05-4398-01A 47 years, female, stage:Stage IIIB, alive, 1431 days 2586.9
TCGA-50-5055-01A 79 years, female, white, stage:Stage IIA, dead, 1830 days 2519.5
TCGA-44-6145-01A 62 years, female, white, stage:Stage IA, alive, 595 days 2509.2
TCGA-55-1594-01A 68 years, male, white, stage:Stage IIIA, alive, 1178 days 2445.3
TCGA-05-4426-01A 71 years, male, stage:Stage IB, alive, 791 days 2428.4
TCGA-49-6743-01A 81 years, female, white, stage:Stage IIIA, alive, 1621 days 2413.9
TCGA-64-5774-01A 60 years, male, white, stage:Stage IB, alive, 2676 days 2362.3
TCGA-78-7146-01A 71 years, female, white, stage:Stage IIIA, dead, 173 days 2352.6
TCGA-73-4670-01A 69 years, female, white, stage:Stage IV, alive, 131 days 2342.5
TCGA-44-3398-01A 77 years, female, white, stage:Stage IA, alive, 1163 days 2176.1
TCGA-86-8055-01A 79 years, male, white, stage:Stage IIA, dead, 124 days 2169.0
TCGA-86-7954-01A 68 years, female, white, stage:Stage IB, alive, 605 days 2135.4
TCGA-J2-8194-01A 69 years, female, white, stage:Stage IIB, alive, 724 days 2116.5
TCGA-91-8496-01A 63 years, female, white, stage:Stage IB, alive, 505 days 2023.4
TCGA-97-8174-01A 67 years, male, white, stage:Stage IIA, dead, 164 days 2002.2
TCGA-05-4425-01A 70 years, female, stage:Stage IV, alive, 669 days 1952.6
TCGA-69-A59K-01A 60 years, female, black or african american, stage:Stage IIB, alive, 591 days 1935.9
TCGA-64-5781-01A 55 years, female, white, stage:Stage IB, alive, 1559 days 1924.0
TCGA-05-5423-01A 65 years, male, stage:Stage IIB, alive, 151 days 1762.9
TCGA-75-5147-01A female, stage:Stage IB, alive, 1333 days 1753.5
TCGA-50-5068-01A 59 years, female, white, stage:Stage IIB, dead, 1499 days 1732.3
TCGA-05-5429-01A 60 years, male, stage:Stage IIIA, dead, 275 days 1729.3
TCGA-50-5045-01A 57 years, female, black or african american, stage:'--, dead, 2174 days 1705.5
TCGA-67-3773-01A 84 years, female, white, stage:Stage IB, alive, 427 days 1639.0
TCGA-64-5775-01A 71 years, male, white, stage:Stage IIIA, dead, 62 days 1604.0
TCGA-L9-A5IP-01A 40 years, female, black or african american, stage:Stage IV, dead, 58 days 1478.9
TCGA-05-5420-01A 67 years, male, stage:Stage IIIA, alive, 457 days 1472.8
TCGA-44-6146-01A 64 years, male, white, stage:Stage IIB, alive, 728 days 1334.5
TCGA-50-5049-01A 70 years, male, white, stage:Stage IA, alive, 3094 days 1268.5
TCGA-05-5428-01A 57 years, male, stage:Stage IIA, alive, 670 days 1213.2
TCGA-75-5146-01A male, stage:Stage IB, alive, 2368 days 1208.3
TCGA-35-5375-01A 61 years, male, white, stage:Stage IIIA, alive, 264 days 921.5
TCGA-50-5066-01A 72 years, male, black or african american, stage:Stage IB, alive, 1442 days 748.9
TCGA-44-6775-01A 72 years, female, white, stage:Stage IB, alive, 705 days 622.3
TCGA-44-3917-01A 33 years, female, white, stage:Stage IB, alive, 1183 days 385.5
TCGA-44-2662-01A 65 years, male, white, stage:Stage IB, alive, 1280 days 244.8
TCGA-44-5645-01A 61 years, female, black or african american, stage:Stage IA, alive, 852 days 203.0
Show allShow less
LUNG ADENOCARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-ND3 is not prognostic in Lung Adenocarcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 7811.8
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6416.0
Number of samples 105
Samples
Sample Description pTPM
L814 73 years, male, stage:Stage IIIA, alive, 2466 days 25736.9
L493 56 years, female, stage:Stage IIB, alive, 2945 days 14002.4
L511 56 years, female, stage:Stage IIIA, alive, 2942 days 12763.8
L728 77 years, male, stage:Stage IIB, dead, 1128 days 11467.5
L551 62 years, male, stage:Stage IA, alive, 2924 days 11455.2
L602 69 years, female, stage:Stage IA, alive, 2277 days 10741.0
L455 52 years, female, stage:Stage IA, alive, 3315 days 10696.7
L850 77 years, male, stage:Stage IIIA, dead, 997 days 9907.6
L569 76 years, female, stage:Stage IA, alive, 2531 days 9762.4
L890 56 years, female, stage:Stage IIB, dead, 1264 days 9753.2
L865 75 years, female, stage:Stage IIB, alive, 1927 days 9606.1
L504 65 years, female, stage:Stage IA, dead, 1295 days 9600.6
L439 80 years, male, stage:Stage IIB, dead, 2773 days 9298.5
L710 72 years, female, stage:Stage IIA, alive, 1775 days 9181.7
L877 70 years, female, stage:Stage IA, alive, 1599 days 8832.8
L749 49 years, female, stage:Stage IIIA, dead, 189 days 8815.9
L782 73 years, female, stage:Stage IIB, alive, 3371 days 8740.0
L561 62 years, female, stage:Stage IA, alive, 2543 days 8554.3
L638 65 years, male, stage:Stage IA, alive, 2076 days 8462.3
L532 69 years, female, stage:Stage IA, dead, 301 days 8399.0
L816 73 years, female, stage:Stage IIA, dead, 353 days 8396.5
L541 70 years, female, stage:Stage IIIA, dead, 915 days 8287.8
L872 71 years, female, stage:Stage IA, alive, 1793 days 7973.0
L612 80 years, female, stage:Stage IIIA, alive, 2410 days 7954.9
L695 68 years, female, stage:Stage IB, dead, 1762 days 7837.7
L607 59 years, male, stage:Stage IB, alive, 2572 days 7827.1
L746 64 years, female, stage:Stage IIIA, dead, 594 days 7796.5
L619 68 years, female, stage:Stage IIIA, dead, 1905 days 7795.8
L875 69 years, female, stage:Stage IA, alive, 1675 days 7494.1
L413 72 years, female, stage:Stage IIIA, dead, 313 days 7482.9
L596 74 years, female, stage:Stage IA, alive, 2319 days 7463.5
L678 65 years, female, stage:Stage IB, dead, 1114 days 7427.2
L826 45 years, female, stage:Stage IV, dead, 935 days 7410.7
L683 77 years, female, stage:Stage IIA, dead, 612 days 7403.1
L832 65 years, female, stage:Stage IA, alive, 2145 days 7364.5
L606 55 years, male, stage:Stage IA, alive, 2336 days 7229.5
L778 65 years, female, stage:Stage IA, alive, 1600 days 7225.2
L879 75 years, male, stage:Stage IV, dead, 873 days 7100.5
L593 78 years, male, stage:Stage IA, dead, 2436 days 6949.6
L656 58 years, male, stage:Stage IA, alive, 2227 days 6946.2
L673 74 years, female, stage:Stage IA, dead, 568 days 6877.9
L566 58 years, male, stage:Stage IB, alive, 2489 days 6750.9
L731 59 years, female, stage:Stage IA, dead, 964 days 6721.8
L400 78 years, male, stage:Stage IIA, dead, 1233 days 6711.9
L531 74 years, male, stage:Stage IB, dead, 928 days 6685.2
L871 74 years, male, stage:Stage IB, dead, 873 days 6606.6
L613 72 years, male, stage:Stage IIIA, dead, 19 days 6599.1
L791 66 years, female, stage:Stage IIIA, dead, 368 days 6514.0
L885 62 years, female, stage:Stage IA, alive, 1618 days 6489.7
L599 80 years, male, stage:Stage IB, dead, 2083 days 6330.0
L605 74 years, female, stage:Stage IA, alive, 2460 days 6156.5
L458 76 years, female, stage:Stage IA, dead, 223 days 6153.4
L887 77 years, male, stage:Stage IA, dead, 374 days 6077.8
L546 57 years, male, stage:Stage IA, dead, 973 days 5977.4
L738 74 years, female, stage:Stage IB, dead, 1314 days 5926.6
L601 75 years, male, stage:Stage IB, dead, 2068 days 5876.5
L764 66 years, male, stage:Stage IIIA, alive, 1684 days 5864.8
L802 62 years, female, stage:Stage IA, dead, 773 days 5818.0
L543 65 years, male, stage:Stage IA, alive, 2711 days 5762.6
L530 76 years, female, stage:Stage IIA, dead, 308 days 5726.6
L567 83 years, female, stage:Stage IIIA, dead, 1299 days 5628.4
L626 76 years, female, stage:Stage IA, dead, 1994 days 5592.1
L616 54 years, male, stage:Stage IA, dead, 410 days 5550.7
L689 69 years, male, stage:Stage IA, alive, 1943 days 5451.7
L800 66 years, female, stage:Stage IA, dead, 2417 days 5443.0
L810 64 years, female, stage:Stage IIIA, dead, 625 days 5435.2
L831 62 years, female, stage:Stage IB, alive, 2152 days 5412.8
L663 62 years, female, stage:Stage IB, alive, 2018 days 5263.8
L725 64 years, female, stage:Stage IA, alive, 1830 days 4941.0
L565 59 years, female, stage:Stage IB, dead, 543 days 4884.6
L630 65 years, female, stage:Stage IA, dead, 1733 days 4879.2
L827 70 years, male, stage:Stage IIB, dead, 1105 days 4838.5
L766 59 years, male, stage:Stage IB, alive, 1793 days 4766.2
L851 70 years, male, stage:Stage IB, dead, 1315 days 4721.8
L867 62 years, female, stage:Stage IIIA, dead, 317 days 4709.6
L873 62 years, female, stage:Stage IA, alive, 1740 days 4577.0
L620 70 years, female, stage:Stage IIIA, dead, 338 days 4421.3
L773 64 years, female, stage:Stage IV, dead, 311 days 4295.2
L484 64 years, female, stage:Stage IA, alive, 2895 days 4181.2
L682 64 years, female, stage:Stage IIB, dead, 840 days 4138.6
L768 60 years, male, stage:Stage IIIA, dead, 472 days 4104.8
L874 56 years, female, stage:Stage IIIA, alive, 1733 days 3987.6
L440 80 years, male, stage:Stage IIB, dead, 651 days 3963.8
L662 66 years, male, stage:Stage IA, dead, 865 days 3928.2
L603 70 years, female, stage:Stage IB, dead, 972 days 3895.7
L585 70 years, female, stage:Stage IIA, dead, 402 days 3860.9
L829 76 years, male, stage:Stage IA, alive, 2173 days 3802.9
L880 75 years, female, stage:Stage IA, alive, 1767 days 3802.7
L462 67 years, male, stage:Stage IIIA, dead, 568 days 3780.9
L545 60 years, female, stage:Stage IA, alive, 2874 days 3738.0
L735 75 years, female, stage:Stage IA, alive, 1830 days 3720.8
L446 71 years, female, stage:Stage IIB, dead, 415 days 3634.9
L703 71 years, male, stage:Stage IIA, dead, 1137 days 3570.6
L842 62 years, female, stage:Stage IB, alive, 2005 days 3446.8
L621 79 years, female, stage:Stage IIIA, dead, 1487 days 3367.2
L557 81 years, female, stage:Stage IB, alive, 2580 days 3280.1
L404 74 years, female, stage:Stage IIA, dead, 2318 days 3156.2
L617 68 years, male, stage:Stage IIIA, dead, 238 days 3012.0
L838 71 years, female, stage:Stage IA, dead, 1005 days 2894.7
L828 68 years, female, stage:Stage IIB, alive, 2222 days 2412.7
L752 65 years, male, stage:Stage IIIA, alive, 1647 days 2299.9
L401 74 years, male, stage:Stage IIIA, dead, 1888 days 2222.8
L688 57 years, male, stage:Stage IIIA, dead, 789 days 2205.2
L808 48 years, female, stage:Stage IA, alive, 3001 days 2185.5
L473 66 years, female, stage:Stage IA, alive, 3021 days 1508.0
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA (TCGA) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-ND3 is not prognostic in Lung Squamous Cell Carcinoma (TCGA)


Stage:


Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 3802.3
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 6122.4
Number of samples 489
Samples
Sample Description pTPM
TCGA-56-A4BW-01A 55 years, male, white, stage:Stage IIA, alive, 585 days 29043.4
TCGA-63-6202-01A male, stage:Stage IIA, alive, 1602 days 28640.3
TCGA-46-6025-01A 71 years, male, white, stage:Stage IIB, alive, 324 days 25597.7
TCGA-NC-A5HR-01A 75 years, female, white, stage:Stage IIA, alive, 1244 days 21256.5
TCGA-77-8143-01A 76 years, male, stage:Stage IIIA, dead, 803 days 20477.2
TCGA-O2-A52W-01A 63 years, male, black or african american, stage:Stage I, dead, 261 days 20180.6
TCGA-94-7033-01A 73 years, male, white, stage:Stage IB, alive, 640 days 19627.7
TCGA-56-8629-01A 63 years, male, white, stage:Stage IIA, alive, 481 days 19459.9
TCGA-39-5027-01A 73 years, male, white, stage:Stage IB, alive, 3108 days 18977.3
TCGA-77-7140-01A 69 years, female, white, stage:Stage IIB, dead, 632 days 18350.3
TCGA-56-A4BX-01A 70 years, male, white, stage:Stage IIA, alive, 405 days 17254.5
TCGA-NK-A7XE-01A 66 years, male, black or african american, stage:Stage IIIB, alive, 13 days 16439.6
TCGA-56-A49D-01A 67 years, male, white, stage:Stage IIIA, alive, 637 days 16108.0
TCGA-63-A5MW-01A 76 years, male, stage:Stage IB, alive, 1639 days 16056.2
TCGA-77-8140-01A 66 years, female, stage:Stage IIB, dead, 351 days 16052.5
TCGA-NC-A5HL-01A 73 years, male, white, stage:Stage IIA, dead, 88 days 15527.3
TCGA-37-A5EN-01A 59 years, male, white, stage:Stage IIIB, alive, 660 days 15305.6
TCGA-85-A4CL-01A 65 years, male, white, stage:Stage IA, dead, 921 days 15243.2
TCGA-37-4129-01A 52 years, female, white, stage:Stage IA, alive, 242 days 15204.3
TCGA-63-A5MB-01A 62 years, male, stage:Stage IB, alive, 3123 days 14354.3
TCGA-85-A4QR-01A 67 years, male, white, stage:Stage IB, alive, 600 days 14309.3
TCGA-34-A5IX-01A 80 years, male, white, stage:Stage IIB, alive, 1031 days 13835.0
TCGA-43-2576-01A 62 years, female, white, stage:Stage IIIA, alive, 1223 days 13676.4
TCGA-56-8307-01A 55 years, female, white, stage:Stage IIB, alive, 818 days 13549.0
TCGA-85-A50Z-01A 57 years, male, white, stage:Stage IIA, alive, 493 days 13503.0
TCGA-33-AASI-01A 65 years, female, black or african american, stage:Stage IIB, dead, 1344 days 13417.5
TCGA-56-7221-01A 79 years, male, white, stage:Stage IB, alive, 608 days 13241.2
TCGA-60-2726-01A 56 years, male, white, stage:Stage IIA, dead, 358 days 13215.7
TCGA-77-7335-01A 62 years, female, white, stage:Stage IIIB, dead, 2133 days 13198.0
TCGA-21-1082-01A 61 years, male, white, stage:Stage IB, alive, 3644 days 12920.3
TCGA-56-A5DS-01A 72 years, female, white, stage:Stage IB, alive, 8 days 12906.0
TCGA-NC-A5HO-01A 70 years, female, white, stage:Stage IIIA, alive, 1336 days 12568.7
TCGA-58-A46L-01A 73 years, male, white, stage:Stage IIIA, alive, 1723 days 12495.3
TCGA-98-A539-01A 63 years, male, white, stage:Stage IIB, alive, 173 days 12475.4
TCGA-98-A53H-01A 76 years, female, white, stage:Stage IA, alive, 618 days 12348.8
TCGA-33-A5GW-01A 67 years, male, white, stage:Stage IIA, dead, 9 days 12133.1
TCGA-56-7579-01A 61 years, male, white, stage:Stage IIIA, dead, 951 days 11925.0
TCGA-85-A4QQ-01A 68 years, male, white, stage:Stage IB, dead, 927 days 11647.6
TCGA-33-AASL-01A 57 years, female, black or african american, stage:Stage IA, dead, 826 days 11393.2
TCGA-NC-A5HT-01A 69 years, male, white, stage:Stage IIIA, alive, 804 days 11375.4
TCGA-56-7580-01A 84 years, male, white, stage:Stage IB, alive, 925 days 11244.3
TCGA-56-7582-01A 83 years, male, white, stage:Stage IB, alive, 601 days 11206.7
TCGA-98-A53B-01A 69 years, male, white, stage:Stage IB, dead, 61 days 11093.7
TCGA-77-7465-01A 58 years, male, white, stage:Stage IIA, alive, 990 days 11022.1
TCGA-39-5024-01A 65 years, female, white, stage:Stage IIIA, alive, 2510 days 11010.3
TCGA-77-7142-01A 59 years, female, white, stage:Stage IB, alive, 2227 days 11004.5
TCGA-98-A53J-01A 77 years, male, white, stage:Stage IB, alive, 630 days 10957.2
TCGA-85-A5B5-01A 58 years, male, white, stage:Stage IA, alive, 111 days 10949.4
TCGA-66-2756-01A 68 years, male, stage:Stage IIIB, alive, 30 days 10811.7
TCGA-33-4566-01A 40 years, male, white, stage:Stage IB, dead, 5287 days 10726.9
TCGA-98-A53D-01A 68 years, male, white, stage:Stage IIB, dead, 645 days 10720.2
TCGA-85-8288-01A 70 years, male, white, stage:Stage IIA, dead, 402 days 10700.6
TCGA-NC-A5HJ-01A 59 years, male, white, stage:Stage IIB, dead, 418 days 10534.6
TCGA-NC-A5HQ-01A 70 years, male, white, stage:Stage IIIA, dead, 448 days 10503.0
TCGA-34-5236-01A 60 years, male, white, stage:Stage IIB, dead, 276 days 10484.9
TCGA-63-7023-01A male, stage:Stage IIA, alive, 1682 days 10472.1
TCGA-NC-A5HP-01A 69 years, male, white, stage:Stage IV, dead, 770 days 10456.6
TCGA-85-8479-01A 66 years, male, white, stage:Stage IA, alive, 468 days 10450.9
TCGA-85-8352-01A 67 years, male, white, stage:Stage IIIA, dead, 161 days 10438.6
TCGA-90-A59Q-01A 61 years, female, white, stage:Stage IIA, dead, 322 days 10317.2
TCGA-94-A4VJ-01A 71 years, female, white, stage:Stage IA, alive, 430 days 10290.4
TCGA-85-8354-01A 53 years, male, white, stage:Stage IB, alive, 995 days 10092.6
TCGA-85-8584-01A 71 years, male, white, stage:Stage IIA, dead, 383 days 9983.7
TCGA-18-3408-01A 77 years, female, white, stage:Stage IB, dead, 2304 days 9983.5
TCGA-33-4547-01A 68 years, male, white, stage:Stage IB, alive, 2419 days 9924.7
TCGA-85-A512-01A 46 years, male, white, stage:Stage IIA, alive, 465 days 9894.9
TCGA-98-A53I-01A 64 years, male, white, stage:Stage IIA, alive, 565 days 9888.4
TCGA-56-8623-01A 71 years, male, white, stage:Stage IB, dead, 692 days 9765.9
TCGA-39-5037-01A 65 years, male, white, stage:Stage IIA, alive, 1690 days 9722.5
TCGA-56-8304-01A 73 years, female, white, stage:Stage IA, alive, 106 days 9697.5
TCGA-77-7463-01A 75 years, male, white, stage:Stage IB, dead, 1423 days 9609.0
TCGA-33-6738-01A 80 years, male, white, stage:Stage IIIA, alive, 1927 days 9547.0
TCGA-90-7964-01A 70 years, male, white, stage:Stage IB, alive, 428 days 9485.2
TCGA-94-7943-01A 80 years, male, white, stage:Stage IA, alive, 559 days 9458.3
TCGA-51-4081-01A 55 years, male, white, stage:Stage IIB, alive, 911 days 9452.4
TCGA-98-A53C-01A 77 years, female, white, stage:Stage IA, alive, 822 days 9441.9
TCGA-22-4595-01A 57 years, male, white, stage:Stage IIIA, dead, 734 days 9437.6
TCGA-85-A53L-01A 63 years, male, asian, stage:Stage IIA, alive, 377 days 9400.1
TCGA-56-8626-01A 59 years, male, white, stage:Stage IA, dead, 302 days 9388.9
TCGA-85-A4PA-01A 61 years, male, white, stage:Stage IB, alive, 741 days 9339.4
TCGA-NC-A5HM-01A 76 years, male, white, stage:Stage IB, alive, 1212 days 9305.7
TCGA-77-A5GA-01A 76 years, male, stage:Stage IB, alive, 1280 days 9206.3
TCGA-85-7696-01A 64 years, male, white, stage:Stage IA, alive, 1111 days 9184.4
TCGA-56-7223-01A 66 years, male, white, stage:Stage IIIA, dead, 442 days 9170.2
TCGA-L3-A4E7-01A 71 years, male, white, stage:Stage IB, alive, 392 days 9130.5
TCGA-56-7222-01A 60 years, male, white, stage:Stage IB, dead, 562 days 9057.8
TCGA-33-6737-01A 71 years, male, white, stage:Stage IIIA, dead, 601 days 8967.2
TCGA-56-8082-01A 80 years, female, white, stage:Stage IIA, alive, 455 days 8835.3
TCGA-43-A56V-01A 61 years, male, black or african american, stage:Stage IIIA, alive, 366 days 8816.8
TCGA-63-A5MY-01A 63 years, male, stage:Stage IA, alive, 1052 days 8814.0
TCGA-33-AASD-01A 83 years, male, black or african american, stage:Stage IA, dead, 2249 days 8797.2
TCGA-33-4582-01A 55 years, male, white, stage:Stage IA, dead, 3149 days 8767.1
TCGA-O2-A52N-01A 78 years, male, white, stage:Stage I, dead, 1006 days 8750.1
TCGA-63-A5MT-01A 74 years, male, stage:Stage IIB, alive, 498 days 8694.3
TCGA-77-8133-01A 74 years, male, stage:Stage IIA, dead, 1640 days 8670.1
TCGA-22-4599-01A 73 years, female, white, stage:Stage IB, dead, 1161 days 8653.2
TCGA-NK-A5CR-01A 77 years, male, stage:Stage IB, alive, 2542 days 8611.1
TCGA-NC-A5HE-01A 60 years, male, white, stage:Stage IIB, alive, 2336 days 8610.6
TCGA-63-A5MV-01A 69 years, male, stage:Stage IIA, alive, 1100 days 8578.6
TCGA-56-8504-01A 74 years, male, white, stage:Stage IB, alive, 510 days 8546.2
TCGA-18-4083-01A 63 years, male, white, stage:Stage IIB, dead, 188 days 8501.7
TCGA-85-8052-01A 53 years, male, white, stage:Stage IIB, alive, 734 days 8470.1
TCGA-NC-A5HG-01A 59 years, male, white, stage:Stage IIIA, alive, 1963 days 8467.6
TCGA-98-8023-01A 70 years, male, white, stage:Stage IIIA, alive, 649 days 8466.0
TCGA-63-A5MP-01A 56 years, male, stage:Stage IIB, alive, 769 days 8441.9
TCGA-56-A4ZJ-01A 75 years, female, white, stage:Stage IA, alive, 640 days 8429.1
TCGA-98-8022-01A 61 years, male, white, stage:Stage IA, dead, 933 days 8415.8
TCGA-77-8154-01A 67 years, male, stage:Stage IA, alive, 1841 days 8353.2
TCGA-60-2721-01A 73 years, male, white, stage:Stage IB, alive, 983 days 8219.6
TCGA-77-8145-01A 73 years, male, stage:Stage IIIB, dead, 212 days 8217.2
TCGA-58-8391-01A 57 years, female, white, stage:Stage IIIA, alive, 2167 days 8140.4
TCGA-33-AASB-01A 66 years, male, black or african american, stage:Stage IB, dead, 211 days 8139.9
TCGA-56-A4ZK-01A 76 years, female, white, stage:Stage IB, alive, 570 days 8035.8
TCGA-66-2790-01A 72 years, male, stage:Stage IIB, alive, 699 days 8027.4
TCGA-37-4141-01A 65 years, female, white, stage:Stage IA, alive, 12 days 7888.9
TCGA-22-4596-01A 69 years, female, white, stage:Stage IB, dead, 17 days 7848.8
TCGA-85-A513-01A 60 years, female, asian, stage:Stage IA, alive, 910 days 7842.7
TCGA-43-2578-01A 59 years, female, white, stage:Stage IA, dead, 684 days 7830.7
TCGA-43-5668-01A 78 years, male, white, stage:Stage IIA, dead, 559 days 7824.6
TCGA-77-7141-01A 64 years, male, white, stage:Stage IB, alive, 15 days 7791.7
TCGA-85-A510-01A 74 years, female, white, stage:Stage IIB, alive, 482 days 7776.5
TCGA-56-7731-01A 66 years, female, white, stage:Stage IB, dead, 3 days 7733.4
TCGA-56-8628-01A 78 years, male, white, stage:Stage IA, alive, 616 days 7710.2
TCGA-63-A5MG-01A 68 years, male, stage:Stage IB, alive, 2148 days 7662.3
TCGA-NC-A5HK-01A 58 years, female, white, stage:Stage IIB, alive, 128 days 7648.9
TCGA-58-8392-01A 70 years, male, white, stage:Stage IB, dead, 501 days 7641.1
TCGA-56-8308-01A 79 years, male, white, stage:Stage IIB, alive, 517 days 7549.0
TCGA-22-1002-01A 69 years, male, white, stage:Stage IA, dead, 131 days 7476.6
TCGA-43-A475-01A 67 years, female, white, stage:Stage IIB, alive, 296 days 7437.8
TCGA-58-A46N-01A 52 years, male, white, stage:Stage IB, alive, 910 days 7415.0
TCGA-O2-A52V-01A 75 years, female, black or african american, stage:Stage II, dead, 1335 days 7385.7
TCGA-58-A46J-01A 64 years, male, white, stage:Stage IIB, alive, 2589 days 7359.6
TCGA-96-7545-01A 73 years, male, white, stage:Stage IA, dead, 1736 days 7335.1
TCGA-77-8146-01A 72 years, male, stage:Stage IA, alive, 3189 days 7329.2
TCGA-77-8150-01A 64 years, male, stage:Stage IIIA, dead, 1655 days 7311.7
TCGA-85-6798-01A 57 years, male, white, stage:Stage IIIA, dead, 195 days 7304.2
TCGA-22-4601-01A 73 years, female, white, stage:Stage IIIA, dead, 1057 days 7298.6
TCGA-96-8169-01A 67 years, female, white, stage:Stage IA, alive, 557 days 7297.9
TCGA-NC-A5HI-01A 68 years, female, white, stage:Stage IB, alive, 1743 days 7285.3
TCGA-85-8072-01A 60 years, male, white, stage:Stage IA, alive, 932 days 7261.0
TCGA-85-8580-01A 52 years, female, white, stage:Stage IB, alive, 1113 days 7250.9
TCGA-85-A511-01A 62 years, male, white, stage:Stage IIB, dead, 455 days 7216.8
TCGA-85-A4JB-01A 74 years, male, white, stage:Stage IIB, alive, 942 days 7173.1
TCGA-22-5471-01A 75 years, male, white, stage:Stage IB, alive, 1845 days 7160.7
TCGA-NC-A5HD-01A 79 years, male, white, stage:Stage IIB, dead, 2 days 7104.1
TCGA-18-5592-01A 57 years, male, stage:Stage IIB, alive, 1519 days 7002.6
TCGA-NC-A5HN-01A 77 years, male, white, stage:Stage IIA, alive, 1499 days 6992.0
TCGA-43-8118-01A 55 years, female, white, stage:Stage IA, dead, 89 days 6957.8
TCGA-56-8624-01A 84 years, male, white, stage:Stage IIB, alive, 420 days 6917.4
TCGA-NK-A5CX-01A 73 years, male, white, stage:Stage IIA, alive, 111 days 6847.4
TCGA-66-2789-01A 73 years, male, stage:Stage IIIB, dead, 123 days 6821.0
TCGA-66-2794-01A 64 years, male, stage:Stage IIIB, alive, 1645 days 6786.0
TCGA-21-A5DI-01A 77 years, male, white, stage:Stage IA, alive, 979 days 6779.5
TCGA-LA-A446-01A 68 years, male, white, stage:Stage IA, alive, 401 days 6747.0
TCGA-92-7340-01A 45 years, female, white, stage:Stage IIA, alive, 82 days 6717.3
TCGA-37-4132-01A 61 years, female, white, stage:Stage IV, alive, 227 days 6712.3
TCGA-60-2719-01A 83 years, female, white, stage:Stage IB, alive, 1297 days 6686.9
TCGA-MF-A522-01A 54 years, male, white, stage:Stage IB, dead, 360 days 6685.9
TCGA-96-8170-01A 75 years, female, white, stage:Stage IIA, alive, 531 days 6647.8
TCGA-22-4604-01A 73 years, male, white, stage:Stage IIA, dead, 399 days 6642.9
TCGA-39-5034-01A 73 years, female, white, stage:Stage IIB, dead, 1107 days 6586.7
TCGA-56-7730-01A 73 years, male, white, stage:Stage IIA, dead, 198 days 6519.9
TCGA-63-A5MH-01A 68 years, male, stage:Stage IA, alive, 2026 days 6487.5
TCGA-96-A4JL-01A 78 years, female, asian, stage:Stage IIA, alive, 842 days 6467.2
TCGA-39-5021-01A 70 years, male, white, stage:Stage IB, dead, 2086 days 6453.3
TCGA-22-4605-01A 78 years, female, stage:Stage IB, dead, 974 days 6432.8
TCGA-77-8148-01A 68 years, male, stage:Stage IIIA, alive, 2023 days 6413.4
TCGA-77-7338-01A 64 years, male, white, stage:Stage IB, dead, 5 days 6392.6
TCGA-77-8153-01A 77 years, female, stage:Stage IB, alive, 1992 days 6392.2
TCGA-58-8386-01A 75 years, male, stage:Stage IV, dead, 1 days 6380.0
TCGA-34-5929-01A 78 years, female, white, stage:Stage IB, dead, 151 days 6368.0
TCGA-77-8156-01A 60 years, male, stage:Stage IB, alive, 1106 days 6351.6
TCGA-68-8251-01A 78 years, male, white, stage:Stage IB, alive, 406 days 6340.8
TCGA-21-1078-01A 77 years, male, white, stage:Stage IB, dead, 474 days 6309.6
TCGA-77-A5GF-01A 70 years, male, stage:Stage IIA, dead, 840 days 6307.0
TCGA-18-3409-01A 74 years, male, white, stage:Stage IA, alive, 3747 days 6237.4
TCGA-77-8131-01A 72 years, male, stage:Stage IB, dead, 383 days 6232.1
TCGA-92-8065-01A 74 years, female, white, stage:Stage IIB, alive, 70 days 6227.3
TCGA-21-1076-01A 54 years, female, white, stage:Stage IB, alive, 1852 days 6152.4
TCGA-77-7337-01A 65 years, male, white, stage:Stage IIB, dead, 3253 days 6146.8
TCGA-18-3417-01A 65 years, male, stage:Stage IV, dead, 1097 days 6137.9
TCGA-60-2715-01A 51 years, male, white, stage:Stage IA, dead, 1075 days 6116.9
TCGA-37-4130-01A 56 years, male, white, stage:Stage IA, alive, 247 days 6116.4
TCGA-34-2600-01A 76 years, female, white, stage:Stage IA, dead, 1874 days 6088.0
TCGA-77-8128-01A 60 years, male, stage:Stage IIIA, dead, 1150 days 6059.6
TCGA-18-3414-01A 73 years, male, asian, stage:Stage IV, dead, 716 days 5977.2
TCGA-92-7341-01A 71 years, male, white, stage:Stage IB, alive, 106 days 5975.5
TCGA-77-A5FZ-01A 64 years, male, stage:Stage IIIB, dead, 3838 days 5961.5
TCGA-21-1070-01A 60 years, female, black or african american, stage:Stage IIIA, alive, 3636 days 5930.7
TCGA-39-5040-01A 59 years, male, white, stage:Stage IIIA, dead, 519 days 5875.8
TCGA-39-5016-01A 44 years, male, white, stage:Stage IIA, alive, 3850 days 5857.5
TCGA-22-0944-01A 61 years, male, white, stage:Stage IB, dead, 223 days 5844.8
TCGA-77-8009-01A 68 years, male, stage:Stage IIB, dead, 1695 days 5816.6
TCGA-85-7698-01A 48 years, male, white, stage:Stage IA, alive, 952 days 5804.8
TCGA-33-AAS8-01A 59 years, female, black or african american, stage:Stage IA, dead, 1114 days 5796.9
TCGA-37-A5EM-01A 49 years, male, white, stage:Stage II, alive, 867 days 5772.7
TCGA-52-7811-01A 67 years, male, white, stage:Stage IB, dead, 266 days 5732.4
TCGA-94-8035-01A 64 years, male, white, stage:Stage IIB, alive, 122 days 5722.6
TCGA-56-8503-01A 76 years, female, white, stage:Stage IIB, alive, 41 days 5699.1
TCGA-77-7139-01A 56 years, male, white, stage:Stage IIB, alive, 4261 days 5680.8
TCGA-60-2716-01A 39 years, male, stage:Stage IIB, alive, 1475 days 5680.1
TCGA-60-2708-01A 64 years, female, white, stage:Stage IIB, alive, 2447 days 5676.1
TCGA-56-5898-01A 69 years, male, white, stage:Stage IA, alive, 555 days 5662.8
TCGA-NC-A5HF-01A 74 years, male, white, stage:Stage IIIB, dead, 138 days 5613.7
TCGA-33-A4WN-01A 60 years, male, white, stage:Stage IB, dead, 143 days 5613.5
TCGA-66-2782-01A 71 years, male, stage:Stage IIB, dead, 365 days 5579.9
TCGA-90-6837-01A 64 years, male, white, stage:Stage IIB, alive, 758 days 5577.3
TCGA-66-2777-01A 71 years, male, stage:Stage IB, alive, 61 days 5521.7
TCGA-22-5477-01A 65 years, male, white, stage:Stage IA, dead, 1346 days 5503.3
TCGA-68-7755-01A 60 years, female, white, stage:Stage IIA, alive, 83 days 5494.8
TCGA-56-8309-01A 66 years, male, white, stage:Stage IA, alive, 428 days 5491.7
TCGA-60-2698-01A 62 years, male, white, stage:Stage IIB, dead, 311 days 5476.8
TCGA-60-2703-01A 73 years, male, white, stage:Stage IIB, dead, 2945 days 5452.4
TCGA-85-7710-01A 59 years, female, white, stage:Stage IA, alive, 42 days 5450.8
TCGA-39-5035-01A 72 years, female, white, stage:Stage IA, alive, 2080 days 5433.5
TCGA-77-6844-01A 74 years, male, white, stage:Stage IIIA, dead, 2284 days 5410.8
TCGA-56-8201-01A 74 years, male, white, stage:Stage IIB, dead, 397 days 5408.2
TCGA-94-A5I6-01A 62 years, male, white, stage:Stage IIB, alive, 538 days 5385.5
TCGA-34-2596-01A 70 years, male, white, stage:Stage IIB, dead, 80 days 5333.1
TCGA-52-7809-01A 74 years, male, white, stage:Stage IB, dead, 166 days 5302.9
TCGA-33-4538-01A 66 years, male, white, stage:Stage IIIA, dead, 2979 days 5299.0
TCGA-66-2767-01A 62 years, male, stage:Stage IIIB, alive, 61 days 5289.9
TCGA-60-2706-01A 58 years, male, white, stage:Stage IA, alive, 2820 days 5261.4
TCGA-98-A53A-01A 70 years, male, black or african american, stage:Stage IB, dead, 552 days 5252.4
TCGA-77-A5G3-01A 63 years, male, stage:Stage IIB, alive, 4570 days 5234.2
TCGA-85-8481-01A 70 years, male, white, stage:Stage IIB, dead, 236 days 5204.5
TCGA-56-A5DR-01A 81 years, male, white, stage:Stage IA, alive, 4 days 5099.2
TCGA-66-2791-01A 66 years, male, stage:Stage IIIB, dead, 153 days 5094.4
TCGA-96-7544-01A 83 years, male, white, stage:Stage IIB, dead, 2160 days 5090.8
TCGA-63-A5MR-01A 70 years, female, stage:Stage IB, alive, 2716 days 5081.5
TCGA-56-8622-01A 68 years, male, white, stage:Stage IB, alive, 55 days 5079.8
TCGA-85-8276-01A 62 years, male, white, stage:Stage IIA, alive, 1050 days 5072.7
TCGA-33-AASJ-01A 60 years, male, black or african american, stage:Stage IB, dead, 3600 days 5047.5
TCGA-85-7697-01A 49 years, male, white, stage:Stage IIB, alive, 1063 days 5040.8
TCGA-43-8116-01A 73 years, male, white, stage:Stage IA, alive, 358 days 5020.0
TCGA-33-4533-01A 76 years, female, black or african american, stage:Stage IB, alive, 4068 days 5000.2
TCGA-66-2734-01A 62 years, female, stage:Stage IB, alive, 1311 days 4994.8
TCGA-43-6771-01A 85 years, male, white, stage:Stage IB, dead, 166 days 4974.9
TCGA-77-6845-01A 69 years, male, white, stage:Stage IIB, dead, 708 days 4968.6
TCGA-34-8456-01A 71 years, female, white, stage:Stage IIA, alive, 804 days 4965.4
TCGA-22-1012-01A 80 years, female, white, stage:Stage IB, dead, 429 days 4965.3
TCGA-85-A4JC-01A 84 years, male, white, stage:Stage IIA, dead, 604 days 4955.1
TCGA-39-5029-01A 67 years, male, white, stage:Stage IIIA, dead, 740 days 4932.2
TCGA-22-4613-01A 73 years, female, white, stage:Stage IA, dead, 358 days 4932.1
TCGA-51-6867-01A 72 years, female, white, stage:Stage I, dead, 1856 days 4919.6
TCGA-66-2763-01A 63 years, female, stage:Stage IB, alive, 30 days 4904.2
TCGA-60-2714-01A 66 years, female, white, stage:Stage IIB, alive, 1531 days 4896.3
TCGA-22-5482-01A 81 years, male, white, stage:Stage IB, dead, 357 days 4893.6
TCGA-56-7822-01A 75 years, male, black or african american, stage:Stage IIB, dead, 532 days 4876.4
TCGA-63-7021-01A male, stage:Stage IA, alive, 2142 days 4873.0
TCGA-85-8664-01A 73 years, male, white, stage:Stage IIB, dead, 550 days 4867.0
TCGA-94-8490-01A 70 years, male, white, stage:Stage IIB, alive, 153 days 4860.5
TCGA-43-8115-01A 72 years, female, white, stage:Stage IIA, alive, 407 days 4844.2
TCGA-85-A50M-01A 47 years, male, asian, stage:Stage IIA, dead, 826 days 4800.4
TCGA-90-A4EE-01A 53 years, male, white, stage:Stage IIA, alive, 688 days 4786.0
TCGA-66-2793-01A 68 years, male, stage:Stage IIIB, dead, 306 days 4767.2
TCGA-43-7657-01A 68 years, female, white, stage:Stage IA, alive, 236 days 4765.8
TCGA-77-6843-01A 74 years, male, white, stage:Stage IIA, dead, 2224 days 4763.8
TCGA-63-7022-01A female, stage:Stage IA, alive, 2073 days 4732.6
TCGA-21-1083-01A 75 years, male, white, stage:Stage IA, dead, 1315 days 4724.5
TCGA-43-5670-01A 70 years, male, white, stage:Stage IIA, alive, 849 days 4723.6
TCGA-22-4607-01A 75 years, male, white, stage:Stage IB, dead, 587 days 4714.6
TCGA-98-A538-01A 67 years, male, white, stage:Stage IIB, alive, 826 days 4708.3
TCGA-98-8021-01A 75 years, female, white, stage:Stage IA, alive, 937 days 4706.0
TCGA-21-5787-01A 65 years, male, black or african american, stage:Stage IIIA, dead, 329 days 4700.2
TCGA-63-A5MJ-01A 54 years, male, stage:Stage IIB, alive, 1824 days 4697.7
TCGA-18-3416-01A 83 years, male, stage:Stage IIB, dead, 973 days 4670.3
TCGA-60-2725-01A 74 years, male, white, stage:Stage IB, alive, 816 days 4668.4
TCGA-63-A5ML-01A 68 years, male, stage:Stage IB, alive, 1386 days 4656.4
TCGA-21-1081-01A 69 years, male, white, stage:Stage IIB, dead, 284 days 4653.2
TCGA-46-3769-01A 57 years, male, white, stage:'--, alive, 135 days 4650.8
TCGA-22-5481-01A 72 years, female, white, stage:Stage IIB, dead, 2409 days 4645.1
TCGA-52-7622-01A 62 years, female, white, stage:Stage IA, alive, 862 days 4635.3
TCGA-34-5928-01A 83 years, female, white, stage:Stage IIB, alive, 1196 days 4631.5
TCGA-98-7454-01A 73 years, male, white, stage:Stage IB, alive, 652 days 4631.0
TCGA-34-7107-01A 70 years, male, white, stage:Stage II, dead, 34 days 4613.7
TCGA-77-8008-01A 68 years, male, stage:Stage IB, dead, 2639 days 4611.8
TCGA-85-8666-01A 65 years, male, white, stage:Stage IB, dead, 687 days 4603.1
TCGA-22-1000-01A 76 years, male, white, stage:Stage IB, dead, 454 days 4543.4
TCGA-60-2712-01A 79 years, female, white, stage:Stage IIB, dead, 274 days 4537.5
TCGA-22-1005-01A 63 years, male, white, stage:Stage IA, dead, 1953 days 4532.3
TCGA-NK-A5D1-01A 57 years, male, white, stage:Stage IIA, alive, 511 days 4525.0
TCGA-85-8048-01A 62 years, male, white, stage:Stage IA, alive, 765 days 4524.4
TCGA-J1-A4AH-01A 70 years, male, white, stage:Stage IIA, alive, 581 days 4521.5
TCGA-77-A5G6-01A 66 years, male, stage:Stage IIIA, dead, 678 days 4519.6
TCGA-58-8388-01A 60 years, male, white, stage:Stage IB, dead, 412 days 4494.6
TCGA-77-8138-01A 74 years, male, stage:Stage IB, dead, 539 days 4491.1
TCGA-66-2783-01A 67 years, male, stage:Stage IIIB, alive, 759 days 4474.6
TCGA-63-A5MI-01A 65 years, male, stage:Stage IIIA, alive, 1784 days 4458.6
TCGA-66-2787-01A 57 years, male, stage:Stage IA, alive, 1217 days 4455.2
TCGA-60-2713-01A 64 years, male, white, stage:Stage IB, alive, 1731 days 4425.8
TCGA-58-A46M-01A 61 years, male, white, stage:Stage IIB, alive, 1072 days 4418.4
TCGA-60-2724-01A 47 years, male, white, stage:Stage IIIA, alive, 717 days 4390.4
TCGA-66-2744-01A 71 years, male, stage:Stage IIB, alive, 30 days 4387.8
TCGA-66-2770-01A 79 years, male, stage:Stage IB, alive, 700 days 4361.4
TCGA-43-7656-01A 71 years, male, white, stage:Stage IA, alive, 596 days 4352.4
TCGA-37-5819-01A 64 years, male, white, stage:Stage IIIA, alive, 103 days 4350.1
TCGA-22-5479-01A 64 years, male, white, stage:Stage IB, dead, 2625 days 4344.7
TCGA-68-A59I-01A 73 years, female, black or african american, stage:Stage IIIA, alive, 492 days 4339.8
TCGA-60-2722-01A 66 years, male, white, stage:Stage IIB, alive, 908 days 4339.2
TCGA-18-3421-01A 65 years, male, white, stage:Stage IB, alive, 2645 days 4326.9
TCGA-58-8393-01A 68 years, female, white, stage:Stage IB, alive, 1058 days 4323.1
TCGA-56-8625-01A 66 years, female, white, stage:Stage IIIA, dead, 315 days 4318.7
TCGA-34-5927-01A 70 years, female, white, stage:Stage IA, alive, 1361 days 4307.1
TCGA-85-8277-01A 70 years, male, white, stage:Stage IIIA, dead, 307 days 4302.1
TCGA-77-7138-01A 67 years, male, stage:Stage IB, dead, 340 days 4298.8
TCGA-34-5232-01A 75 years, female, black or african american, stage:Stage IIA, alive, 2471 days 4294.4
TCGA-66-2742-01A 70 years, male, stage:Stage IV, alive, 641 days 4284.8
TCGA-21-1080-01A 66 years, male, white, stage:Stage IB, alive, 3724 days 4281.3
TCGA-43-A474-01A 66 years, male, white, stage:Stage IIA, alive, 353 days 4275.1
TCGA-85-6560-01A 59 years, male, white, stage:Stage IIA, alive, 1259 days 4272.5
TCGA-37-4135-01A 68 years, male, white, stage:Stage IB, alive, 207 days 4267.8
TCGA-85-8350-01A 61 years, male, white, stage:Stage IA, alive, 683 days 4243.5
TCGA-22-4593-01A 77 years, male, white, stage:Stage IIA, dead, 1067 days 4231.5
TCGA-43-7658-01A 75 years, female, white, stage:Stage IA, dead, 2378 days 4226.5
TCGA-56-A4BY-01A 66 years, male, white, stage:Stage IB, dead, 543 days 4209.3
TCGA-37-3789-01A 65 years, male, white, stage:Stage IB, alive, 13 days 4209.0
TCGA-46-6026-01A 81 years, male, white, stage:Stage IIB, alive, 423 days 4177.4
TCGA-58-A46K-01A 59 years, male, white, stage:Stage IIIA, dead, 1045 days 4170.0
TCGA-37-3783-01A 51 years, male, white, stage:Stage IIIA, alive, 122 days 4166.2
TCGA-22-1016-01A 65 years, male, white, stage:Stage IB, dead, 822 days 4164.8
TCGA-37-4133-01A 63 years, male, white, stage:Stage IIIA, alive, 238 days 4158.9
TCGA-22-5491-01A 74 years, male, white, stage:Stage IA, dead, 1713 days 4133.2
TCGA-34-8454-01A 62 years, female, white, stage:Stage IIIA, alive, 1180 days 4121.7
TCGA-21-5784-01A 80 years, female, white, stage:Stage IB, alive, 1268 days 4117.8
TCGA-22-1017-01A 62 years, male, white, stage:Stage IA, dead, 1485 days 4115.7
TCGA-66-2737-01A 72 years, male, stage:Stage IIB, alive, 61 days 4104.0
TCGA-90-7766-01A 66 years, female, white, stage:Stage IA, alive, 289 days 4098.9
TCGA-85-8582-01A 49 years, male, white, stage:Stage IA, alive, 1160 days 4096.8
TCGA-66-2754-01A 67 years, male, stage:Stage IIIA, alive, 61 days 4087.2
TCGA-33-4587-01A 63 years, female, white, stage:Stage IB, dead, 1656 days 4085.7
TCGA-60-2697-01A 41 years, male, white, stage:Stage IIA, dead, 372 days 4076.1
TCGA-66-2786-01A 68 years, female, stage:Stage IA, alive, 790 days 4073.1
TCGA-70-6722-01A 47 years, male, asian, stage:Stage IIIA, alive, 367 days 4059.8
TCGA-43-3394-01A 52 years, male, black or african american, stage:Stage IB, dead, 1190 days 4025.0
TCGA-34-5231-01A 72 years, male, white, stage:Stage IA, dead, 1984 days 4011.4
TCGA-22-4609-01A 81 years, male, white, stage:Stage IA, dead, 291 days 4006.3
TCGA-66-2781-01A 67 years, male, stage:Stage IB, alive, 121 days 3989.4
TCGA-60-2711-01A 64 years, female, white, stage:Stage IB, alive, 1260 days 3974.6
TCGA-85-8355-01A 63 years, male, white, stage:Stage IA, alive, 61 days 3934.9
TCGA-43-2581-01A 47 years, female, white, stage:Stage IIIA, alive, 1176 days 3924.2
TCGA-77-A5G1-01A 75 years, male, stage:Stage IIIA, alive, 4026 days 3921.3
TCGA-77-8139-01A 72 years, male, stage:Stage IIB, alive, 3166 days 3915.3
TCGA-63-7020-01A male, stage:Stage IA, alive, 2133 days 3853.9
TCGA-43-3920-01A 71 years, male, white, stage:Stage IB, alive, 1007 days 3833.9
TCGA-39-5019-01A 70 years, male, white, stage:Stage IB, alive, 3387 days 3820.6
TCGA-34-2608-01A 84 years, male, white, stage:Stage IB, dead, 1000 days 3784.0
TCGA-63-A5MM-01A 69 years, female, stage:Stage IIB, dead, 456 days 3782.2
TCGA-33-4583-01A 73 years, male, white, stage:Stage IA, dead, 4601 days 3775.7
TCGA-18-3406-01A 67 years, male, white, stage:Stage IA, dead, 371 days 3753.8
TCGA-94-A5I4-01A 61 years, male, white, stage:Stage IIA, alive, 491 days 3753.6
TCGA-22-5478-01A 79 years, male, stage:Stage IB, dead, 24 days 3742.8
TCGA-77-8136-01A 74 years, female, stage:Stage IIB, dead, 1189 days 3742.4
TCGA-L3-A524-01A 45 years, female, white, stage:Stage IIB, dead, 490 days 3736.5
TCGA-60-2707-01A 70 years, male, stage:Stage IB, dead, 667 days 3707.6
TCGA-66-2769-01A 75 years, male, stage:Stage IIIB, dead, 215 days 3704.7
TCGA-34-8455-01A 67 years, male, white, stage:Stage IV, dead, 123 days 3699.4
TCGA-XC-AA0X-01A 77 years, female, black or african american, stage:Stage IA, dead, 6 days 3692.8
TCGA-58-8387-01A 60 years, male, white, stage:Stage IIA, dead, 403 days 3684.2
TCGA-21-1071-01A 67 years, male, white, stage:Stage IB, dead, 1426 days 3683.6
TCGA-18-3412-01A 52 years, male, white, stage:Stage IB, dead, 345 days 3665.0
TCGA-66-2795-01A 68 years, male, stage:Stage IIIB, alive, 122 days 3645.3
TCGA-18-3407-01A 72 years, male, asian, stage:Stage IB, dead, 136 days 3644.6
TCGA-90-7767-01A 56 years, male, white, stage:Stage IIB, alive, 89 days 3643.4
TCGA-68-7756-01A 84 years, male, white, stage:Stage IIIA, alive, 202 days 3625.9
TCGA-18-4721-01A 74 years, male, white, stage:Stage IA, alive, 4694 days 3622.3
TCGA-60-2720-01A 60 years, female, white, stage:Stage IB, alive, 97 days 3619.5
TCGA-85-7843-01A 50 years, male, white, stage:Stage IIA, alive, 35 days 3575.7
TCGA-34-5239-01A 75 years, male, white, stage:Stage IIIA, alive, 1834 days 3548.6
TCGA-85-A4CN-01A 56 years, female, white, stage:Stage IIB, alive, 1038 days 3529.5
TCGA-66-2778-01A 68 years, female, stage:Stage IIIB, alive, 578 days 3519.8
TCGA-66-2755-01A 63 years, male, stage:Stage IB, alive, 28 days 3515.0
TCGA-96-A4JK-01A 65 years, male, white, stage:Stage IIA, alive, 589 days 3506.3
TCGA-77-A5GH-01A 81 years, male, stage:Stage IB, alive, 1182 days 3460.5
TCGA-90-A4ED-01A 69 years, male, white, stage:Stage IB, alive, 615 days 3453.2
TCGA-60-2709-01A 69 years, male, black or african american, stage:Stage IB, alive, 1505 days 3441.3
TCGA-63-A5MS-01A 78 years, male, stage:Stage IB, alive, 2381 days 3439.9
TCGA-51-4080-01A 65 years, male, black or african american, stage:Stage IIIB, dead, 12 days 3430.3
TCGA-33-4532-01A 68 years, male, white, stage:Stage IB, dead, 3924 days 3407.8
TCGA-33-4586-01A 57 years, male, white, stage:Stage IIIA, dead, 428 days 3393.4
TCGA-43-A56U-01A 76 years, female, white, stage:Stage IA, alive, 432 days 3393.0
TCGA-22-5473-01A 78 years, male, white, stage:'--, dead, 1933 days 3387.7
TCGA-66-2785-01A 65 years, male, stage:Stage IB, alive, 60 days 3362.7
TCGA-56-A62T-01A 78 years, male, black or african american, stage:Stage IIA, alive, 440 days 3310.5
TCGA-90-7769-01A 55 years, male, white, stage:Stage IIB, alive, 358 days 3293.5
TCGA-O2-A52S-01A 57 years, female, white, stage:Stage III, dead, 387 days 3283.9
TCGA-66-2773-01A 69 years, male, stage:Stage IB, dead, 92 days 3270.6
TCGA-NC-A5HH-01A 53 years, male, white, stage:Stage IA, alive, 37 days 3263.0
TCGA-NK-A5CT-01A 70 years, male, white, stage:Stage IA, alive, 1997 days 3227.5
TCGA-52-7810-01A 60 years, female, white, stage:Stage IIB, alive, 923 days 3209.3
TCGA-66-2792-01A 58 years, male, stage:Stage IIB, alive, 913 days 3198.8
TCGA-22-4591-01A 80 years, male, white, stage:Stage IIIA, dead, 623 days 3195.6
TCGA-77-6842-01A 79 years, male, white, stage:Stage IIB, dead, 899 days 3186.1
TCGA-18-3410-01A 81 years, male, stage:Stage IIB, dead, 146 days 3174.8
TCGA-66-2753-01A 69 years, male, stage:Stage IB, alive, 31 days 3166.1
TCGA-56-8083-01A 56 years, male, white, stage:Stage IB, alive, 150 days 3157.6
TCGA-39-5036-01A 73 years, male, white, stage:Stage IB, alive, 2165 days 3156.5
TCGA-85-7950-01A 46 years, male, white, stage:Stage IB, alive, 576 days 3124.7
TCGA-O2-A52Q-01A 44 years, female, white, stage:Stage III, dead, 113 days 3095.5
TCGA-46-3767-01A 76 years, male, white, stage:Stage IA, alive, 396 days 3092.5
TCGA-60-2704-01A 73 years, male, white, stage:Stage IIB, dead, 1154 days 3068.5
TCGA-46-3766-01A 62 years, female, white, stage:Stage IA, alive, 370 days 3066.5
TCGA-85-6175-01A 63 years, female, white, stage:Stage IIB, dead, 294 days 3041.4
TCGA-56-5897-01A 74 years, male, white, stage:Stage IA, alive, 378 days 3037.6
TCGA-46-3768-01A 58 years, male, white, stage:Stage IIIA, dead, 299 days 3024.2
TCGA-22-1011-01A 73 years, male, white, stage:Stage IB, dead, 53 days 3008.7
TCGA-21-1072-01A 75 years, male, white, stage:Stage IB, alive, 3016 days 3004.5
TCGA-18-3411-01A 63 years, female, stage:Stage IIIA, alive, 3576 days 2989.4
TCGA-66-2771-01A 60 years, male, stage:Stage IIB, alive, 578 days 2986.4
TCGA-21-5783-01A 76 years, male, white, stage:Stage IB, dead, 2680 days 2978.5
TCGA-77-8007-01A 68 years, male, stage:Stage IIB, dead, 198 days 2957.9
TCGA-O2-A5IB-01A 71 years, female, white, stage:Stage III, dead, 340 days 2921.2
TCGA-39-5011-01A 70 years, female, white, stage:Stage IA, alive, 4053 days 2917.0
TCGA-85-8049-01A 57 years, male, white, stage:Stage IB, alive, 579 days 2903.6
TCGA-66-2727-01A 55 years, female, stage:Stage IB, dead, 516 days 2856.6
TCGA-66-2757-01A 65 years, female, stage:Stage IA, dead, 1338 days 2839.0
TCGA-22-5472-01A 67 years, male, white, stage:Stage IB, dead, 1975 days 2836.6
TCGA-22-5485-01A 58 years, female, white, stage:Stage IA, dead, 916 days 2825.4
TCGA-21-5782-01A 68 years, female, white, stage:Stage IB, dead, 962 days 2785.9
TCGA-85-7844-01A 71 years, male, white, stage:Stage IB, alive, 911 days 2737.4
TCGA-22-4594-01A 60 years, female, stage:Stage IIIA, dead, 1470 days 2716.1
TCGA-85-6561-01A 66 years, male, white, stage:Stage IB, alive, 1224 days 2696.1
TCGA-22-A5C4-01A 70 years, male, white, stage:Stage IIA, alive, 671 days 2675.5
TCGA-92-8063-01A 52 years, male, white, stage:Stage IIIA, alive, 122 days 2666.7
TCGA-77-8130-01A 69 years, male, stage:Stage IIB, alive, 4765 days 2661.7
TCGA-21-1077-01A 64 years, male, white, stage:Stage IIB, dead, 1058 days 2660.9
TCGA-66-2800-01A 70 years, male, stage:Stage IIIB, alive, 1492 days 2659.0
TCGA-18-5595-01A 50 years, male, stage:Stage IB, dead, 827 days 2637.2
TCGA-51-4079-01A 73 years, female, black or african american, stage:Stage IB, dead, 12 days 2618.0
TCGA-85-8071-01A 52 years, male, white, stage:Stage IIA, alive, 815 days 2615.6
TCGA-22-5483-01A 74 years, male, white, stage:Stage IIA, dead, 573 days 2605.3
TCGA-37-A5EL-01A 53 years, male, white, stage:Stage IIB, dead, 1143 days 2601.5
TCGA-68-A59J-01A 74 years, female, white, stage:Stage IB, alive, 448 days 2599.0
TCGA-98-8020-01A 56 years, female, black or african american, stage:Stage IIIA, dead, 84 days 2579.8
TCGA-22-0940-01A 71 years, male, white, stage:Stage IIA, dead, 669 days 2578.5
TCGA-60-2696-01A 76 years, female, black or african american, stage:Stage IIA, dead, 109 days 2574.2
TCGA-21-1079-01A 71 years, male, white, stage:Stage IIIA, dead, 965 days 2558.5
TCGA-39-5022-01A 76 years, male, white, stage:Stage IB, dead, 1679 days 2533.6
TCGA-39-5031-01A 76 years, female, stage:Stage IA, dead, 1841 days 2524.0
TCGA-21-1075-01A 57 years, male, white, stage:Stage IIB, alive, 2134 days 2497.5
TCGA-85-8353-01A 72 years, male, white, stage:Stage IIIA, dead, 94 days 2465.5
TCGA-18-4086-01A 64 years, male, stage:Stage IB, dead, 85 days 2446.4
TCGA-66-2766-01A 54 years, male, stage:Stage IIIA, alive, 31 days 2445.6
TCGA-66-2758-01A 71 years, male, stage:Stage IB, alive, 639 days 2437.7
TCGA-37-3792-01A 69 years, male, white, stage:Stage IB, alive, 12 days 2435.8
TCGA-85-8287-01A 72 years, male, white, stage:Stage IA, dead, 23 days 2398.0
TCGA-56-8305-01A 72 years, male, white, stage:Stage IB, alive, 105 days 2395.4
TCGA-43-6773-01A 76 years, male, white, stage:Stage IIB, dead, 116 days 2392.0
TCGA-68-8250-01A 66 years, male, black or african american, stage:Stage IA, alive, 244 days 2343.1
TCGA-56-1622-01A 58 years, male, white, stage:Stage IB, dead, 881 days 2341.7
TCGA-46-3765-01A 59 years, female, white, stage:Stage IA, alive, 405 days 2341.2
TCGA-58-8390-01A 70 years, male, white, stage:Stage IIA, alive, 911 days 2335.3
TCGA-85-8351-01A 72 years, male, white, stage:Stage IIA, alive, 510 days 2320.5
TCGA-66-2768-01A 57 years, male, stage:Stage IIB, alive, 61 days 2300.2
TCGA-85-7699-01A 73 years, male, white, stage:Stage IIIA, dead, 1001 days 2267.0
TCGA-18-3415-01A 77 years, male, stage:Stage IB, dead, 2803 days 2248.3
TCGA-33-4589-01A 62 years, female, white, stage:Stage IIB, dead, 47 days 2247.1
TCGA-43-6143-01A 70 years, male, white, stage:Stage IB, alive, 699 days 2242.9
TCGA-94-7557-01A 73 years, male, black or african american, stage:Stage IB, dead, 5 days 2239.7
TCGA-52-7812-01A 68 years, male, white, stage:'--, dead, 835 days 2238.8
TCGA-34-5240-01A 73 years, female, white, stage:Stage IIB, alive, 1541 days 2208.9
TCGA-66-2780-01A 65 years, male, stage:Stage IB, dead, 366 days 2193.7
TCGA-60-2695-01A 74 years, female, white, stage:Stage IB, alive, 642 days 2190.5
TCGA-56-6545-01A 77 years, female, white, stage:Stage IB, alive, 666 days 2181.3
TCGA-18-3419-01A 73 years, male, stage:Stage IIB, alive, 2811 days 2178.7
TCGA-60-2723-01A 74 years, female, white, stage:Stage IB, alive, 1092 days 2166.5
TCGA-60-2710-01A 67 years, female, white, stage:Stage IIA, alive, 2024 days 2161.4
TCGA-43-6647-01A 69 years, female, white, stage:Stage IIB, alive, 757 days 2019.9
TCGA-63-A5MN-01A 78 years, female, stage:Stage IIB, dead, 345 days 1995.5
TCGA-70-6723-01A 65 years, male, asian, stage:Stage IIA, alive, 375 days 1950.6
TCGA-94-8491-01A 73 years, male, white, stage:Stage IIA, alive, 810 days 1866.6
TCGA-34-5234-01A 71 years, female, white, stage:Stage IA, alive, 2271 days 1864.0
TCGA-21-5786-01A 64 years, male, white, stage:Stage IB, alive, 1032 days 1843.8
TCGA-39-5039-01A 76 years, male, white, stage:Stage IIA, dead, 544 days 1842.3
TCGA-66-2759-01A 66 years, male, stage:Stage IIIA, alive, 762 days 1750.2
TCGA-92-8064-01A 58 years, male, white, stage:'--, alive, 160 days 1724.3
TCGA-66-2765-01A 64 years, male, stage:Stage IB, alive, 61 days 1720.5
TCGA-66-2788-01A 56 years, male, stage:Stage IB, alive, 699 days 1637.4
TCGA-39-5030-01A 81 years, female, asian, stage:Stage IIIA, dead, 59 days 1631.2
TCGA-39-5028-01A 75 years, male, white, stage:Stage IIIA, dead, 52 days 1586.7
TCGA-22-5474-01A 74 years, male, white, stage:Stage IB, dead, 445 days 1561.2
TCGA-43-6770-01A 59 years, female, black or african american, stage:Stage IB, alive, 653 days 1525.9
TCGA-LA-A7SW-01A 71 years, male, black or african american, stage:Stage IIIA, dead, 408 days 1476.6
TCGA-22-5480-01A 66 years, female, white, stage:Stage IA, dead, 2170 days 1472.9
TCGA-77-8144-01A 70 years, male, stage:Stage IB, alive, 833 days 1380.4
TCGA-85-8070-01A 71 years, male, white, stage:Stage IB, alive, 960 days 1335.8
TCGA-34-5241-01A 79 years, male, white, stage:Stage IB, dead, 515 days 1295.9
TCGA-22-5489-01A 64 years, male, white, stage:Stage IA, dead, 1912 days 1070.7
TCGA-22-5492-01A 73 years, female, stage:Stage IIIA, dead, 506 days 888.1
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LUNG SQUAMOUS CELL CARCINOMA (VALIDATION) - Interactive survival scatter ploti

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisi

Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.

MT-ND3 is not prognostic in Lung Squamous Cell Carcinoma (validation)


Stage:

Survival analysis
Current cut offi

Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.

:
Best expression cut offi

Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .

When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.

: 4660.73
Median expressioni

Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.

: N/A
Median follow up timei

Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.

: N/A
P scorei

Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.

N/A
5-year survival highi

5-year survival for patients with higher expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
5-year survival lowi

5-year survival for patients with lower expression than the expression cutoff.

For melanoma and glioma, 3-year survival is shown.

N/A
TCGA RNA samplesi

RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.

Average pTPM 4886.9
Number of samples 68
Samples
Sample Description pTPM
L534 66 years, male, stage:Stage IIA, alive, 2693 days 13155.0
L472 71 years, male, stage:Stage IB, dead, 423 days 9810.5
L854 62 years, female, stage:Stage IB, alive, 2256 days 9186.9
L447 67 years, male, stage:Stage IIB, alive, 3203 days 9176.2
L490 58 years, male, stage:Stage IA, dead, 716 days 8387.1
L758 84 years, male, stage:Stage IA, dead, 1562 days 8173.1
L857 69 years, male, stage:Stage IB, dead, 226 days 7620.2
L884 71 years, male, stage:Stage IIA, alive, 1627 days 7428.5
L420 57 years, female, stage:Stage IIB, dead, 295 days 7074.3
L444 74 years, female, stage:Stage IIB, alive, 3337 days 6762.5
L586 67 years, male, stage:Stage IIA, dead, 784 days 6428.4
L858 69 years, female, stage:Stage IIB, dead, 558 days 6409.1
L881 70 years, male, stage:Stage IB, alive, 1752 days 6072.3
L633 77 years, female, stage:Stage IA, alive, 2102 days 5982.8
L655 62 years, male, stage:Stage IIA, dead, 1603 days 5915.3
L452 62 years, male, stage:Stage IIIA, dead, 3115 days 5900.8
L658 65 years, female, stage:Stage IIB, alive, 2083 days 5871.5
L468 53 years, male, stage:Stage IB, alive, 3004 days 5802.9
L568 77 years, female, stage:Stage IIB, dead, 71 days 5696.3
L529 79 years, female, stage:Stage IA, alive, 2775 days 5393.4
L464 66 years, male, stage:Stage IB, dead, 1935 days 5346.9
L483 65 years, male, stage:Stage IB, dead, 77 days 5342.0
L736 67 years, male, stage:Stage IA, dead, 1195 days 5296.2
L592 61 years, male, stage:Stage IB, alive, 2368 days 5201.3
L457 46 years, female, stage:Stage IIA, alive, 2901 days 5180.3
L559 72 years, male, stage:Stage IIB, alive, 2615 days 5091.5
L747 74 years, female, stage:Stage IA, dead, 1112 days 4948.6
L712 61 years, male, stage:Stage IA, alive, 1698 days 4848.4
L459 75 years, male, stage:Stage IIA, alive, 3181 days 4823.9
L719 63 years, male, stage:Stage IB, alive, 1615 days 4774.6
L488 61 years, female, stage:Stage IIA, alive, 2993 days 4768.8
L744 75 years, male, stage:Stage IA, alive, 1614 days 4660.7
L650 69 years, female, stage:Stage IB, dead, 986 days 4621.3
L466 65 years, female, stage:Stage IIIA, dead, 412 days 4531.8
L755 82 years, male, stage:Stage IIA, dead, 227 days 4417.4
L824 70 years, male, stage:Stage IA, dead, 665 days 4411.4
L767 67 years, male, stage:Stage IA, alive, 1718 days 4176.1
L817 76 years, female, stage:Stage IIIA, dead, 1279 days 4152.5
L496 77 years, male, stage:Stage IB, alive, 2761 days 4103.9
L685 71 years, female, stage:Stage IIB, alive, 1944 days 4064.1
L852 64 years, male, stage:Stage IB, dead, 700 days 4063.4
L723 67 years, male, stage:Stage IIA, dead, 433 days 3989.0
L864 66 years, female, stage:Stage IA, alive, 2192 days 3948.1
L572 58 years, male, stage:Stage IA, alive, 2532 days 3898.4
L563 61 years, female, stage:Stage IIB, dead, 1216 days 3830.3
L818 67 years, male, stage:Stage IB, alive, 2480 days 3803.2
L608 73 years, male, stage:Stage IA, alive, 2350 days 3738.3
L456 48 years, male, stage:Stage IIA, dead, 1660 days 3706.7
L661 66 years, male, stage:Stage IA, dead, 1123 days 3705.1
L886 71 years, male, stage:Stage IB, dead, 1932 days 3703.6
L856 69 years, male, stage:Stage IA, dead, 1465 days 3666.2
L820 73 years, female, stage:Stage IA, alive, 2405 days 3662.4
L442 75 years, female, stage:Stage IB, dead, 2433 days 3629.7
L406 64 years, male, stage:Stage IA, alive, 3057 days 3486.7
L788 54 years, female, stage:Stage IA, alive, 3385 days 3485.9
L642 67 years, male, stage:Stage IB, dead, 1167 days 3480.3
L860 77 years, male, stage:Stage IA, alive, 2056 days 3448.8
L604 67 years, male, stage:Stage IIA, dead, 286 days 3448.4
L760 80 years, male, stage:Stage IIA, alive, 1895 days 3320.0
L652 82 years, male, stage:Stage IA, dead, 5 days 3008.7
L753 61 years, male, stage:Stage IIA, alive, 1705 days 3001.7
L739 49 years, female, stage:Stage IIIA, dead, 352 days 2825.7
L470 78 years, female, stage:Stage IB, dead, 1774 days 2585.1
L715 69 years, female, stage:Stage IIIA, dead, 150 days 2436.5
L756 72 years, male, stage:Stage IB, alive, 1796 days 2148.0
L751 59 years, female, stage:Stage IIIA, alive, 1600 days 2001.7
L539 78 years, male, stage:Stage IB, dead, 370 days 1866.9
L644 67 years, male, stage:Stage IA, dead, 282 days 1414.2
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LUNG ADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples 213
Samples
Sample ID Sample type nRPX
CPT0000920017 Tumor N/A
CPT0000930003 Normal N/A
CPT0001060010 Tumor N/A
CPT0001070003 Normal N/A
CPT0001380003 Tumor N/A
CPT0001390003 Normal N/A
CPT0001580009 Tumor N/A
CPT0001590003 Normal N/A
CPT0001660013 Tumor N/A
CPT0001690003 Normal N/A
CPT0001800013 Tumor N/A
CPT0001810003 Normal N/A
CPT0001960003 Tumor N/A
CPT0001970003 Normal N/A
CPT0008410003 Tumor N/A
CPT0008420003 Normal N/A
CPT0008450003 Tumor N/A
CPT0011710004 Tumor N/A
CPT0011750003 Normal N/A
CPT0011910004 Tumor N/A
CPT0011930003 Normal N/A
CPT0013600003 Tumor N/A
CPT0013630003 Normal N/A
CPT0013880003 Tumor N/A
CPT0013910003 Normal N/A
CPT0014260003 Tumor N/A
CPT0014290003 Normal N/A
CPT0014860003 Tumor N/A
CPT0014930003 Normal N/A
CPT0015410003 Tumor N/A
CPT0015420003 Normal N/A
CPT0021450003 Tumor N/A
CPT0021490003 Normal N/A
CPT0023310003 Tumor N/A
CPT0023320003 Normal N/A
CPT0051690004 Tumor N/A
CPT0052170004 Tumor N/A
CPT0052940004 Tumor N/A
CPT0053040004 Tumor N/A
CPT0055100004 Tumor N/A
CPT0062810003 Normal N/A
CPT0063730003 Tumor N/A
CPT0063750003 Normal N/A
CPT0063810003 Tumor N/A
CPT0063840003 Normal N/A
CPT0066780003 Tumor N/A
CPT0066810003 Normal N/A
CPT0066890003 Tumor N/A
CPT0066930003 Normal N/A
CPT0067070003 Tumor N/A
CPT0067110003 Normal N/A
CPT0067250003 Tumor N/A
CPT0067290003 Normal N/A
CPT0067450003 Tumor N/A
CPT0067470004 Normal N/A
CPT0067620003 Tumor N/A
CPT0067770003 Normal N/A
CPT0067940003 Tumor N/A
CPT0067950003 Normal N/A
CPT0068100003 Tumor N/A
CPT0068130003 Normal N/A
CPT0068610003 Tumor N/A
CPT0068650003 Normal N/A
CPT0068800003 Tumor N/A
CPT0068830003 Normal N/A
CPT0069360003 Tumor N/A
CPT0069370003 Normal N/A
CPT0069520003 Tumor N/A
CPT0069550003 Normal N/A
CPT0069700003 Tumor N/A
CPT0069720003 Normal N/A
CPT0070060003 Tumor N/A
CPT0070080003 Normal N/A
CPT0079830003 Tumor N/A
CPT0079850003 Normal N/A
CPT0082740004 Tumor N/A
CPT0082770003 Normal N/A
CPT0082850004 Tumor N/A
CPT0082890003 Normal N/A
CPT0083100003 Tumor N/A
CPT0083140003 Normal N/A
CPT0083390004 Tumor N/A
CPT0083420003 Normal N/A
CPT0083780003 Tumor N/A
CPT0083810003 Normal N/A
CPT0084140003 Tumor N/A
CPT0084170003 Normal N/A
CPT0086310003 Tumor N/A
CPT0086320003 Normal N/A
CPT0086750003 Tumor N/A
CPT0086770003 Normal N/A
CPT0089340003 Tumor N/A
CPT0089360003 Normal N/A
CPT0090170004 Tumor N/A
CPT0090200003 Normal N/A
CPT0090340003 Tumor N/A
CPT0090370003 Normal N/A
CPT0090570004 Tumor N/A
CPT0090600003 Normal N/A
CPT0090700003 Tumor N/A
CPT0090720003 Normal N/A
CPT0090860003 Tumor N/A
CPT0090900004 Normal N/A
CPT0091240003 Tumor N/A
CPT0091260003 Normal N/A
CPT0091860003 Tumor N/A
CPT0091870003 Normal N/A
CPT0092240003 Tumor N/A
CPT0092250003 Normal N/A
CPT0092530003 Tumor N/A
CPT0092930003 Tumor N/A
CPT0092940003 Normal N/A
CPT0097580003 Tumor N/A
CPT0097600003 Normal N/A
CPT0098130003 Tumor N/A
CPT0102450003 Tumor N/A
CPT0102480003 Normal N/A
CPT0104630003 Tumor N/A
CPT0104650003 Normal N/A
CPT0104750003 Tumor N/A
CPT0104760003 Normal N/A
CPT0104970003 Tumor N/A
CPT0105010004 Normal N/A
CPT0105060003 Tumor N/A
CPT0105190003 Normal N/A
CPT0105230003 Tumor N/A
CPT0105250003 Normal N/A
CPT0105270003 Tumor N/A
CPT0105330003 Tumor N/A
CPT0105370004 Normal N/A
CPT0105510003 Tumor N/A
CPT0105550003 Normal N/A
CPT0105600003 Tumor N/A
CPT0105610003 Normal N/A
CPT0105630003 Tumor N/A
CPT0105680003 Normal N/A
CPT0105710003 Tumor N/A
CPT0105740003 Normal N/A
CPT0105940003 Tumor N/A
CPT0105980003 Normal N/A
CPT0106100003 Normal N/A
CPT0106110003 Tumor N/A
CPT0109680004 Tumor N/A
CPT0109700003 Normal N/A
CPT0109710003 Normal N/A
CPT0109720004 Tumor N/A
CPT0109740004 Tumor N/A
CPT0109760003 Normal N/A
CPT0109830004 Tumor N/A
CPT0109850003 Normal N/A
CPT0110860004 Tumor N/A
CPT0110890003 Normal N/A
CPT0110980004 Tumor N/A
CPT0111300003 Tumor N/A
CPT0111480003 Normal N/A
CPT0111590003 Normal N/A
CPT0112060003 Tumor N/A
CPT0112080003 Normal N/A
CPT0113210003 Tumor N/A
CPT0113220003 Normal N/A
CPT0113990003 Tumor N/A
CPT0114010003 Normal N/A
CPT0114660004 Tumor N/A
CPT0114690003 Normal N/A
CPT0114840003 Tumor N/A
CPT0114880003 Normal N/A
CPT0115070003 Tumor N/A
CPT0115090003 Normal N/A
CPT0117970003 Tumor N/A
CPT0118010003 Normal N/A
CPT0118160003 Tumor N/A
CPT0118180003 Normal N/A
CPT0118200003 Tumor N/A
CPT0118240003 Normal N/A
CPT0118340003 Tumor N/A
CPT0118360003 Normal N/A
CPT0118570003 Tumor N/A
CPT0118600003 Normal N/A
CPT0118620003 Tumor N/A
CPT0118650003 Normal N/A
CPT0118810003 Tumor N/A
CPT0118830003 Normal N/A
CPT0118880003 Tumor N/A
CPT0118890003 Normal N/A
CPT0125810003 Tumor N/A
CPT0125830003 Normal N/A
CPT0146580004 Tumor N/A
CPT0146600003 Normal N/A
CPT0146680004 Tumor N/A
CPT0146700003 Normal N/A
CPT0146780004 Tumor N/A
CPT0146800003 Normal N/A
CPT0146880004 Tumor N/A
CPT0146980004 Tumor N/A
CPT0147000003 Normal N/A
CPT0147080004 Tumor N/A
CPT0147100003 Normal N/A
CPT0147380004 Tumor N/A
CPT0147400003 Normal N/A
CPT0147480004 Tumor N/A
CPT0147500003 Normal N/A
CPT0147580004 Tumor N/A
CPT0147600003 Normal N/A
CPT0147880004 Tumor N/A
CPT0147900003 Normal N/A
CPT0147980004 Tumor N/A
CPT0148000003 Normal N/A
CPT0148080004 Tumor N/A
CPT0148100003 Normal N/A
CPT0148180004 Tumor N/A
CPT0148200003 Normal N/A
CPT0148280004 Tumor N/A
CPT0148300003 Normal N/A
Show allShow less
LUNG SQUAMOUS CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples 212
Samples
Sample ID Sample type nRPX
CPT0209510003 Normal N/A
CPT0001030003 Normal N/A
CPT0123370003 Normal N/A
CPT0175560003 Tumor N/A
CPT0218280003 Tumor N/A
CPT0126470003 Normal N/A
CPT0112660003 Normal N/A
CPT0237550004 Tumor N/A
CPT0245790003 Normal N/A
CPT0007740003 Tumor N/A
CPT0102840003 Normal N/A
CPT0233640003 Normal N/A
CPT0238130003 Normal N/A
CPT0221650003 Tumor N/A
CPT0083980003 Tumor N/A
CPT0130410003 Tumor N/A
CPT0112580003 Tumor N/A
CPT0241170003 Tumor N/A
CPT0086260003 Tumor N/A
CPT0064050003 Normal N/A
CPT0233330003 Normal N/A
CPT0079110003 Normal N/A
CPT0126400003 Normal N/A
CPT0104930003 Tumor N/A
CPT0105430003 Normal N/A
CPT0237200004 Tumor N/A
CPT0146400003 Normal N/A
CPT0063440003 Normal N/A
CPT0108560003 Tumor N/A
CPT0221220003 Normal N/A
CPT0079060003 Normal N/A
CPT0126830003 Normal N/A
CPT0208770003 Tumor N/A
CPT0232670003 Tumor N/A
CPT0222730003 Tumor N/A
CPT0209040003 Normal N/A
CPT0234930004 Tumor N/A
CPT0090440003 Tumor N/A
CPT0104380003 Normal N/A
CPT0202740003 Normal N/A
CPT0204600003 Tumor N/A
CPT0237080003 Normal N/A
CPT0183250004 Tumor N/A
CPT0175410003 Normal N/A
CPT0098770003 Tumor N/A
CPT0196810003 Tumor N/A
CPT0112540003 Tumor N/A
CPT0023470003 Tumor N/A
CPT0202530004 Tumor N/A
CPT0117770003 Normal N/A
CPT0245840003 Normal N/A
CPT0233600003 Tumor N/A
CPT0192540004 Tumor N/A
CPT0126740003 Tumor N/A
CPT0223820003 Normal N/A
CPT0197150003 Tumor N/A
CPT0227020003 Tumor N/A
CPT0197090003 Tumor N/A
CPT0197170003 Normal N/A
CPT0130440004 Normal N/A
CPT0146380004 Tumor N/A
CPT0245780003 Tumor N/A
CPT0091610003 Tumor N/A
CPT0175390003 Tumor N/A
CPT0010050003 Tumor N/A
CPT0136640003 Tumor N/A
CPT0111150004 Tumor N/A
CPT0234560003 Tumor N/A
CPT0204820003 Normal N/A
CPT0197860003 Normal N/A
CPT0098800003 Normal N/A
CPT0237990003 Normal N/A
CPT0068280003 Tumor N/A
CPT0108600003 Normal N/A
CPT0175160003 Normal N/A
CPT0091090003 Normal N/A
CPT0186180003 Tumor N/A
CPT0208780003 Normal N/A
CPT0105420003 Tumor N/A
CPT0079100003 Tumor N/A
CPT0225470003 Normal N/A
CPT0101130003 Tumor N/A
CPT0186210003 Normal N/A
CPT0079050003 Tumor N/A
CPT0233160003 Normal N/A
CPT0063430003 Tumor N/A
CPT0086270003 Normal N/A
CPT0089880003 Tumor N/A
CPT0219360003 Tumor N/A
CPT0202580004 Normal N/A
CPT0204660003 Normal N/A
CPT0146480004 Tumor N/A
CPT0237780003 Normal N/A
CPT0223790003 Tumor N/A
CPT0128890003 Tumor N/A
CPT0197380003 Normal N/A
CPT0069900003 Normal N/A
CPT0091820003 Tumor N/A
CPT0197480003 Tumor N/A
CPT0222740003 Normal N/A
CPT0126670003 Tumor N/A
CPT0146500003 Normal N/A
CPT0202220004 Normal N/A
CPT0175270003 Normal N/A
CPT0233120003 Tumor N/A
CPT0217420003 Tumor N/A
CPT0063480003 Tumor N/A
CPT0196820003 Normal N/A
CPT0091050003 Tumor N/A
CPT0126390003 Tumor N/A
CPT0186140003 Normal N/A
CPT0115860003 Normal N/A
CPT0007760003 Normal N/A
CPT0175120003 Tumor N/A
CPT0237410004 Tumor N/A
CPT0010060003 Normal N/A
CPT0232690003 Normal N/A
CPT0147180004 Tumor N/A
CPT0130270003 Tumor N/A
CPT0191750003 Normal N/A
CPT0238110004 Tumor N/A
CPT0183270003 Normal N/A
CPT0087210003 Normal N/A
CPT0237570003 Normal N/A
CPT0126450003 Tumor N/A
CPT0023500003 Normal N/A
CPT0104950003 Normal N/A
CPT0126810003 Tumor N/A
CPT0221200003 Tumor N/A
CPT0063500003 Normal N/A
CPT0197520003 Normal N/A
CPT0245890003 Normal N/A
CPT0128900003 Normal N/A
CPT0227400003 Tumor N/A
CPT0130070003 Normal N/A
CPT0209020004 Tumor N/A
CPT0069890003 Tumor N/A
CPT0191710003 Tumor N/A
CPT0117720003 Tumor N/A
CPT0126530003 Tumor N/A
CPT0190550003 Tumor N/A
CPT0123350003 Tumor N/A
CPT0091620003 Normal N/A
CPT0195510003 Tumor N/A
CPT0126760003 Normal N/A
CPT0197210003 Tumor N/A
CPT0130310003 Normal N/A
CPT0175260003 Tumor N/A
CPT0112600003 Normal N/A
CPT0218310003 Normal N/A
CPT0202040003 Normal N/A
CPT0234820003 Normal N/A
CPT0130030003 Tumor N/A
CPT0186130003 Tumor N/A
CPT0225380003 Tumor N/A
CPT0111000004 Normal N/A
CPT0202400004 Normal N/A
CPT0191860003 Tumor N/A
CPT0234950004 Normal N/A
CPT0001020003 Tumor N/A
CPT0237060004 Tumor N/A
CPT0202720003 Tumor N/A
CPT0209490003 Tumor N/A
CPT0104360003 Tumor N/A
CPT0187370003 Tumor N/A
CPT0112730003 Normal N/A
CPT0112650003 Tumor N/A
CPT0115830003 Tumor N/A
CPT0202350004 Tumor N/A
CPT0204990003 Tumor N/A
CPT0237210003 Normal N/A
CPT0204800003 Tumor N/A
CPT0202170003 Tumor N/A
CPT0205000003 Normal N/A
CPT0245880003 Tumor N/A
CPT0207210003 Tumor N/A
CPT0236420003 Tumor N/A
CPT0233320003 Tumor N/A
CPT0064040003 Tumor N/A
CPT0197100003 Normal N/A
CPT0207250003 Normal N/A
CPT0234580003 Normal N/A
CPT0227070003 Normal N/A
CPT0241210003 Normal N/A
CPT0087190003 Tumor N/A
CPT0147200003 Normal N/A
CPT0083990003 Normal N/A
CPT0192590004 Normal N/A
CPT0221660003 Normal N/A
CPT0237760003 Tumor N/A
CPT0202020008 Tumor N/A
CPT0237430003 Normal N/A
CPT0219390003 Normal N/A
CPT0068320003 Normal N/A
CPT0195520003 Normal N/A
CPT0187380003 Normal N/A
CPT0227420003 Normal N/A
CPT0102790003 Tumor N/A
CPT0197740003 Tumor N/A
CPT0237690004 Tumor N/A
CPT0245830003 Tumor N/A
CPT0147700003 Normal N/A
CPT0236430003 Normal N/A
CPT0191930003 Normal N/A
CPT0147680004 Tumor N/A
CPT0217490003 Normal N/A
CPT0112550003 Normal N/A
CPT0136660003 Normal N/A
CPT0237710003 Normal N/A
CPT0112720003 Tumor N/A
CPT0234790003 Tumor N/A
CPT0237970004 Tumor N/A
Show allShow less
LUNG CANCER - Protein expressioni

A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.

Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

 

Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.


Antibody HPA063296
 Staining
  High
  Medium
  Low
  Not detected
 Intensity
  Strong
  Moderate
  Weak
  Negative
 Quantity
  >75%
  75%-25%
  <25%
  None
 Location
  Nuclear
  Cytoplasmic/membranous
  Cytoplasmic/membranous,nuclear
  None
Adenocarcinoma, NOS
Squamous cell carcinoma, NOS
Squamous cell carcinoma, NOS
Squamous cell carcinoma, metastatic, NOS

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