Expression of MT-ND4 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

MT-ND4 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 7209.82

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average pTPM

11920.2

Number of samples

362

Samples

Sample	Description	pTPM
TCGA-DD-A4NG-01A	77 years, male, white, stage:Stage IIIA, dead, 802 days	48303.1
TCGA-MR-A8JO-01A	34 years, male, white, stage:Stage I, alive, 330 days	42268.3
TCGA-DD-A3A2-01A	76 years, female, white, stage:Stage I, dead, 2131 days	38064.8
TCGA-DD-A4NI-01A	67 years, male, white, stage:Stage II, alive, 816 days	34307.5
TCGA-WJ-A86L-01A	68 years, female, white, stage:Stage I, alive, 345 days	33204.2
TCGA-WX-AA47-01A	33 years, female, white, stage:Stage IIIA, dead, 556 days	30832.3
TCGA-NI-A8LF-01A	74 years, male, white, stage:Stage I, alive, 799 days	30829.5
TCGA-2Y-A9H2-01A	64 years, female, white, stage:Stage I, alive, 1731 days	30191.6
TCGA-5R-AA1D-01A	17 years, female, white, stage:Stage IIIA, alive, 449 days	29944.8
TCGA-ZP-A9D4-01A	64 years, female, white, stage:'--, alive, 395 days	29299.8
TCGA-BC-A216-01A	62 years, female, white, stage:Stage IIIA, alive, 1351 days	29208.9
TCGA-CC-A8HT-01A	74 years, male, asian, stage:Stage IIIA, dead, 140 days	28186.9
TCGA-CC-A7IF-01A	59 years, male, asian, stage:Stage IIIA, dead, 649 days	26845.8
TCGA-DD-A1EK-01A	64 years, female, white, stage:Stage IVB, dead, 558 days	26730.1
TCGA-DD-A4NB-01A	25 years, male, white, stage:Stage I, alive, 989 days	26297.1
TCGA-NI-A4U2-01A	71 years, male, white, stage:Stage IIIA, dead, 1791 days	26211.3
TCGA-DD-AACE-01A	62 years, male, asian, stage:Stage I, alive, 2184 days	24868.2
TCGA-BC-A10Z-01A	62 years, female, white, stage:Stage I, dead, 34 days	24629.4
TCGA-DD-AADU-01A	60 years, male, asian, stage:Stage II, alive, 554 days	24547.1
TCGA-DD-A73A-01A	71 years, male, white, stage:Stage I, alive, 728 days	24408.6
TCGA-RC-A7SH-01A	42 years, male, asian, stage:Stage II, alive, 468 days	24187.7
TCGA-LG-A9QC-01A	48 years, male, white, stage:Stage I, alive, 425 days	23609.9
TCGA-BD-A3ER-01A	62 years, male, white, stage:Stage II, alive, 1115 days	23601.6
TCGA-BC-A10R-01A	66 years, female, white, stage:'--, dead, 308 days	22382.7
TCGA-CC-A8HV-01A	51 years, female, asian, stage:Stage II, dead, 279 days	21799.5
TCGA-G3-A3CH-01A	53 years, male, asian, stage:Stage IIIA, alive, 780 days	21730.4
TCGA-RC-A7SB-01A	53 years, male, asian, stage:Stage II, alive, 588 days	21704.0
TCGA-2Y-A9GU-01A	55 years, female, white, stage:Stage I, alive, 1939 days	21561.9
TCGA-ZS-A9CF-01A	64 years, male, white, stage:Stage II, alive, 2412 days	21127.3
TCGA-DD-AAD6-01A	66 years, male, asian, stage:Stage IIIA, alive, 672 days	21009.3
TCGA-DD-A3A6-01A	72 years, female, white, stage:Stage II, dead, 3258 days	20887.0
TCGA-FV-A3R3-01A	38 years, female, white, stage:Stage I, dead, 366 days	20882.5
TCGA-RC-A7SF-01A	66 years, male, asian, stage:Stage I, alive, 579 days	20752.4
TCGA-DD-A4NE-01A	75 years, female, white, stage:Stage IIIA, dead, 660 days	20513.3
TCGA-KR-A7K0-01A	65 years, male, white, stage:Stage I, dead, 65 days	20339.6
TCGA-G3-AAV1-01A	51 years, male, asian, stage:Stage IIIC, dead, 359 days	20242.9
TCGA-CC-A3MC-01A	54 years, male, asian, stage:Stage IIIA, alive, 363 days	20221.8
TCGA-DD-A1EE-01A	73 years, male, white, stage:Stage IIIA, dead, 349 days	20130.9
TCGA-DD-A118-01A	77 years, female, white, stage:Stage II, alive, 3437 days	20109.2
TCGA-BC-A10Q-01A	72 years, female, white, stage:'--, dead, 1135 days	19905.7
TCGA-DD-AAEA-01A	65 years, male, asian, stage:Stage I, alive, 575 days	19614.5
TCGA-DD-A3A8-01A	75 years, male, white, stage:Stage II, dead, 11 days	19508.7
TCGA-DD-A4NS-01A	61 years, female, white, stage:Stage I, dead, 2456 days	19438.3
TCGA-DD-A1EB-01A	72 years, female, stage:Stage I, alive, 2017 days	19420.6
TCGA-DD-A4NL-01A	46 years, male, white, stage:Stage I, alive, 1711 days	19260.3
TCGA-DD-A4NA-01A	67 years, female, white, stage:Stage IIIC, alive, 1008 days	18980.9
TCGA-DD-AAD8-01A	73 years, female, asian, stage:Stage I, alive, 1219 days	18971.7
TCGA-WQ-A9G7-01A	71 years, female, white, stage:'--, alive, 30 days	18888.7
TCGA-EP-A26S-01A	70 years, male, white, stage:Stage I, alive, 608 days	18854.1
TCGA-DD-A73D-01A	68 years, female, white, stage:Stage II, alive, 693 days	18774.9
TCGA-DD-A11B-01A	73 years, male, white, stage:Stage I, dead, 14 days	18769.0
TCGA-DD-AADA-01A	66 years, female, asian, stage:Stage I, alive, 1233 days	18661.7
TCGA-PD-A5DF-01A	58 years, female, white, stage:Stage IIIB, dead, 639 days	18590.4
TCGA-DD-A4NJ-01A	54 years, female, white, stage:Stage II, alive, 928 days	18473.7
TCGA-DD-AAE6-01A	59 years, female, asian, stage:Stage I, alive, 141 days	18355.7
TCGA-EP-A3JL-01A	76 years, male, white, stage:Stage I, alive, 303 days	18348.8
TCGA-G3-A7M8-01A	31 years, male, asian, stage:Stage I, alive, 430 days	18263.8
TCGA-RC-A6M5-01A	20 years, female, white, stage:Stage IVA, alive, 15 days	18137.4
TCGA-CC-A3MA-01A	61 years, male, asian, stage:Stage IIIA, dead, 303 days	17894.5
TCGA-DD-A4ND-01A	56 years, female, white, stage:Stage I, alive, 2746 days	17890.1
TCGA-BC-A3KG-01A	68 years, female, white, stage:Stage II, alive, 680 days	17887.7
TCGA-DD-AADL-01A	58 years, male, asian, stage:Stage I, alive, 636 days	17865.9
TCGA-DD-AACX-01A	66 years, male, asian, stage:Stage II, alive, 170 days	17676.3
TCGA-G3-A5SK-01A	58 years, male, white, stage:Stage I, alive, 744 days	17610.7
TCGA-K7-AAU7-01A	61 years, male, white, stage:Stage II, alive, 359 days	17596.7
TCGA-BC-A3KF-01A	66 years, female, white, stage:Stage I, alive, 8 days	17526.4
TCGA-DD-AACA-01A	65 years, male, asian, stage:Stage I, alive, 2301 days	17437.9
TCGA-DD-A1EC-01A	20 years, female, white, stage:Stage I, alive, 602 days	17313.3
TCGA-G3-A5SJ-01A	59 years, male, white, stage:Stage I, alive, 698 days	17198.2
TCGA-UB-AA0V-01A	69 years, female, white, stage:Stage I, alive, 314 days	17164.8
TCGA-UB-AA0U-01A	60 years, male, white, stage:Stage II, alive, 327 days	17043.4
TCGA-DD-AACT-01A	69 years, female, asian, stage:Stage I, alive, 1562 days	16999.1
TCGA-DD-AAE9-01A	69 years, male, asian, stage:Stage I, alive, 722 days	16958.3
TCGA-ED-A4XI-01A	58 years, male, asian, stage:Stage II, alive, 819 days	16927.9
TCGA-HP-A5MZ-01A	78 years, male, stage:Stage I, dead, 91 days	16920.7
TCGA-CC-A7IL-01A	61 years, male, asian, stage:Stage IIIA, dead, 278 days	16879.8
TCGA-XR-A8TC-01A	43 years, female, white, stage:Stage I, alive, 1339 days	16806.3
TCGA-ZS-A9CG-01A	55 years, male, white, stage:Stage II, alive, 341 days	16775.2
TCGA-KR-A7K8-01A	57 years, male, stage:Stage I, alive, 906 days	16507.8
TCGA-BC-A10X-01A	52 years, female, white, stage:Stage IIIA, dead, 770 days	16442.0
TCGA-DD-A11C-01A	69 years, male, white, stage:Stage I, alive, 662 days	16400.8
TCGA-DD-A4NF-01A	72 years, male, white, stage:Stage I, alive, 942 days	16340.7
TCGA-DD-AAW1-01A	55 years, male, asian, stage:Stage IIIA, alive, 1989 days	16213.9
TCGA-CC-A7IE-01A	57 years, male, asian, stage:Stage IIIA, dead, 217 days	16165.6
TCGA-DD-AAW2-01A	69 years, male, asian, stage:Stage I, alive, 1855 days	16165.0
TCGA-WX-AA44-01A	64 years, female, white, stage:Stage I, alive, 615 days	16120.1
TCGA-DD-A73B-01A	72 years, female, white, stage:Stage I, dead, 283 days	16104.0
TCGA-CC-A8HS-01A	18 years, male, asian, stage:Stage IIIC, dead, 300 days	16031.7
TCGA-2Y-A9H6-01A	68 years, female, white, stage:Stage I, alive, 357 days	16017.3
TCGA-DD-AAVW-01A	35 years, male, asian, stage:Stage I, alive, 2317 days	15999.1
TCGA-DD-A4NK-01A	80 years, female, white, stage:Stage IIIA, dead, 1210 days	15991.6
TCGA-DD-AAEH-01A	73 years, male, asian, stage:Stage I, alive, 784 days	15912.9
TCGA-BC-A10U-01A	69 years, male, white, stage:'--, dead, 837 days	15858.0
TCGA-XR-A8TF-01A	74 years, male, white, stage:Stage I, dead, 693 days	15766.3
TCGA-DD-AAD0-01A	73 years, female, asian, stage:Stage I, alive, 137 days	15694.3
TCGA-2Y-A9GW-01A	64 years, male, white, stage:Stage I, dead, 1271 days	15673.3
TCGA-2Y-A9GX-01A	68 years, male, white, stage:Stage I, alive, 2442 days	15570.1
TCGA-G3-A3CI-01A	71 years, male, white, stage:Stage I, alive, 180 days	15540.2
TCGA-CC-A9FS-01A	55 years, male, asian, stage:Stage II, alive, 211 days	15443.0
TCGA-G3-A6UC-01A	65 years, male, white, stage:Stage IIIB, alive, 671 days	15408.8
TCGA-EP-A2KC-01A	62 years, male, black or african american, stage:Stage I, dead, 19 days	15403.7
TCGA-DD-AADD-01A	51 years, male, asian, stage:Stage I, alive, 1231 days	15339.1
TCGA-XR-A8TD-01A	49 years, female, white, stage:Stage IIIB, alive, 1030 days	15272.4
TCGA-DD-AADG-01A	70 years, male, asian, stage:Stage IIIA, alive, 1145 days	15252.1
TCGA-ED-A7PX-01A	48 years, female, asian, stage:Stage II, alive, 6 days	15023.1
TCGA-QA-A7B7-01A	48 years, male, black or african american, stage:Stage II, alive, 94 days	14999.4
TCGA-DD-A3A4-01A	37 years, male, white, stage:Stage IIIA, dead, 612 days	14922.4
TCGA-BC-A10T-01A	76 years, male, white, stage:'--, dead, 837 days	14895.8
TCGA-G3-A5SL-01A	70 years, male, white, stage:Stage II, alive, 621 days	14872.2
TCGA-K7-A5RG-01A	66 years, male, black or african american, stage:Stage I, alive, 519 days	14831.4
TCGA-2Y-A9H8-01A	85 years, female, white, stage:'--, dead, 633 days	14812.3
TCGA-DD-A4NH-01A	65 years, female, white, stage:Stage IIIB, alive, 917 days	14778.1
TCGA-DD-A1EA-01A	68 years, male, asian, stage:Stage II, alive, 2415 days	14755.0
TCGA-4R-AA8I-01A	66 years, male, white, stage:Stage II, dead, 262 days	14556.3
TCGA-ED-A82E-01A	60 years, female, asian, stage:Stage IIIA, alive, 408 days	14521.7
TCGA-DD-AA3A-01A	81 years, female, white, stage:Stage I, dead, 410 days	14332.7
TCGA-DD-AAW3-01A	69 years, male, asian, stage:Stage I, alive, 1633 days	14284.9
TCGA-DD-AAED-01A	51 years, male, asian, stage:Stage I, alive, 763 days	14158.6
TCGA-2Y-A9GV-01A	54 years, female, white, stage:Stage I, dead, 2532 days	14138.2
TCGA-G3-A25Z-01A	58 years, male, asian, stage:Stage I, alive, 655 days	14079.2
TCGA-RC-A7SK-01A	59 years, male, asian, stage:Stage I, alive, 472 days	14058.8
TCGA-DD-A116-01A	68 years, male, asian, stage:Stage IIIA, dead, 1622 days	14015.7
TCGA-ED-A97K-01A	54 years, male, asian, stage:Stage IIIA, alive, 6 days	13910.4
TCGA-MI-A75C-01A	64 years, male, white, stage:Stage I, alive, 291 days	13651.4
TCGA-CC-A7IH-01A	58 years, male, asian, stage:Stage IIIA, alive, 365 days	13602.4
TCGA-2Y-A9GZ-01A	82 years, female, white, stage:Stage II, dead, 848 days	13539.7
TCGA-MR-A520-01A	58 years, male, white, stage:Stage I, alive, 229 days	13522.1
TCGA-DD-AAE1-01A	52 years, male, asian, stage:Stage I, alive, 552 days	13522.1
TCGA-ZP-A9D0-01A	67 years, female, black or african american, stage:'--, alive, 1091 days	13372.8
TCGA-BD-A2L6-01A	69 years, male, white, stage:'--, alive, 1363 days	13290.9
TCGA-DD-A1EF-01A	57 years, female, white, stage:Stage I, dead, 394 days	13271.8
TCGA-RC-A6M4-01A	74 years, female, white, stage:Stage IIIA, alive, 22 days	13238.0
TCGA-WX-AA46-01A	61 years, male, white, stage:Stage II, alive, 756 days	13172.9
TCGA-RC-A7S9-01A	47 years, female, asian, stage:Stage I, alive, 640 days	13169.7
TCGA-DD-AAEK-01A	51 years, male, asian, stage:Stage II, alive, 1067 days	13140.1
TCGA-DD-A73F-01A	77 years, female, white, stage:Stage I, alive, 1085 days	13136.3
TCGA-BC-A112-01A	80 years, male, white, stage:'--, dead, 153 days	13106.9
TCGA-DD-A115-01A	53 years, male, white, stage:Stage IIIA, dead, 2542 days	13016.7
TCGA-BC-A8YO-01A	66 years, female, white, stage:Stage IIIC, alive, 562 days	12845.4
TCGA-CC-A5UD-01A	45 years, male, asian, stage:Stage IIIA, dead, 304 days	12834.0
TCGA-DD-A39W-01A	29 years, female, white, stage:Stage III, dead, 827 days	12620.4
TCGA-2Y-A9H5-01A	59 years, female, white, stage:Stage I, dead, 555 days	12534.6
TCGA-DD-AACS-01A	39 years, male, asian, stage:Stage I, alive, 1804 days	12325.3
TCGA-DD-AACJ-01A	75 years, male, asian, stage:Stage II, alive, 2102 days	12235.6
TCGA-CC-A5UC-01A	63 years, male, asian, stage:Stage IIIA, dead, 347 days	12185.0
TCGA-DD-A4NQ-01A	60 years, male, white, stage:Stage II, dead, 373 days	12125.9
TCGA-DD-AADK-01A	68 years, female, asian, stage:Stage II, alive, 1049 days	12057.0
TCGA-DD-A4NV-01A	61 years, male, white, stage:Stage IIIA, alive, 2398 days	11975.0
TCGA-DD-AADW-01A	48 years, male, asian, stage:Stage I, alive, 587 days	11941.7
TCGA-ED-A7PZ-01A	61 years, male, asian, stage:Stage II, alive, 6 days	11931.7
TCGA-G3-A5SM-01A	58 years, male, white, stage:Stage II, alive, 520 days	11871.2
TCGA-DD-A1ED-01A	68 years, male, white, stage:Stage I, alive, 2301 days	11836.3
TCGA-2Y-A9H9-01A	70 years, male, white, stage:Stage I, alive, 697 days	11796.1
TCGA-2Y-A9GT-01A	51 years, male, white, stage:Stage I, dead, 1624 days	11780.0
TCGA-2Y-A9H0-01A	49 years, male, white, stage:Stage IIIA, alive, 3675 days	11735.0
TCGA-2Y-A9HA-01A	70 years, male, white, stage:Stage II, dead, 36 days	11732.6
TCGA-ZP-A9D1-01A	56 years, female, white, stage:'--, alive, 21 days	11713.0
TCGA-CC-A3MB-01A	36 years, male, asian, stage:Stage IIIA, dead, 315 days	11670.1
TCGA-DD-AADF-01A	64 years, female, asian, stage:Stage I, dead, 115 days	11647.9
TCGA-DD-AAEB-01A	60 years, male, asian, stage:Stage I, alive, 478 days	11612.8
TCGA-G3-A7M7-01A	65 years, male, white, stage:Stage I, alive, 361 days	11612.3
TCGA-DD-AAEG-01A	59 years, female, asian, stage:Stage I, alive, 719 days	11592.8
TCGA-DD-A4NR-01A	85 years, female, white, stage:Stage I, dead, 9 days	11573.7
TCGA-WQ-AB4B-01A	62 years, male, white, stage:Stage II, alive, 395 days	11568.6
TCGA-ED-A7PY-01A	20 years, female, asian, stage:Stage II, alive, 390 days	11520.1
TCGA-ED-A627-01A	74 years, male, white, stage:Stage I, alive, 423 days	11468.7
TCGA-DD-AADR-01A	58 years, male, asian, stage:Stage I, alive, 2028 days	11333.6
TCGA-MI-A75H-01A	77 years, male, white, stage:'--, alive, 747 days	11292.3
TCGA-5R-AAAM-01A	65 years, female, white, stage:Stage II, dead, 46 days	11279.0
TCGA-5C-A9VG-01A	58 years, male, white, stage:Stage II, alive, 328 days	11277.4
TCGA-DD-AAE2-01A	51 years, male, asian, stage:Stage I, alive, 638 days	11273.3
TCGA-ZP-A9CY-01A	66 years, female, white, stage:'--, alive, 782 days	11271.4
TCGA-LG-A9QD-01A	68 years, male, white, stage:Stage IIIA, alive, 366 days	11218.1
TCGA-DD-AAEI-01A	72 years, male, asian, stage:Stage I, alive, 1531 days	11216.4
TCGA-DD-AADC-01A	53 years, male, asian, stage:Stage I, dead, 425 days	11190.9
TCGA-DD-AACV-01A	53 years, male, asian, stage:Stage I, alive, 1531 days	11164.1
TCGA-DD-AACQ-01A	50 years, male, asian, stage:Stage II, dead, 432 days	11135.8
TCGA-DD-AAVS-01A	56 years, male, asian, stage:Stage I, alive, 1823 days	11056.1
TCGA-ED-A7XP-01A	53 years, female, asian, stage:Stage II, alive, 400 days	10974.4
TCGA-UB-A7MD-01A	67 years, male, black or african american, stage:Stage I, dead, 52 days	10886.1
TCGA-MI-A75E-01A	61 years, male, white, stage:Stage IIIC, alive, 507 days	10746.6
TCGA-DD-AADB-01A	51 years, male, asian, stage:Stage I, alive, 1242 days	10703.1
TCGA-DD-AAE3-01A	50 years, male, asian, stage:Stage I, alive, 566 days	10693.6
TCGA-DD-AAD2-01A	66 years, male, asian, stage:Stage I, alive, 658 days	10676.1
TCGA-DD-AACZ-01A	63 years, female, asian, stage:Stage I, dead, 171 days	10670.3
TCGA-DD-A1EH-01A	23 years, male, white, stage:Stage III, alive, 1495 days	10529.3
TCGA-BC-A110-01A	51 years, female, black or african american, stage:'--, dead, 2116 days	10499.7
TCGA-ED-A459-01A	47 years, male, asian, stage:Stage II, alive, 910 days	10416.2
TCGA-CC-A7IK-01A	59 years, male, asian, stage:Stage IIIA, dead, 262 days	10401.3
TCGA-GJ-A6C0-01A	75 years, female, white, stage:Stage II, dead, 31 days	10377.5
TCGA-XR-A8TE-01A	16 years, male, white, stage:Stage IIIA, alive, 925 days	10376.6
TCGA-G3-A5SI-01A	44 years, male, asian, stage:Stage II, dead, 768 days	10288.5
TCGA-DD-AAVR-01A	44 years, male, asian, stage:Stage I, alive, 2513 days	10222.3
TCGA-5C-A9VH-01A	70 years, male, white, stage:Stage I, alive, 322 days	10179.1
TCGA-G3-A25U-01A	63 years, female, asian, stage:Stage I, alive, 1636 days	10030.8
TCGA-DD-A4NP-01A	32 years, male, white, stage:Stage I, alive, 3308 days	9955.9
TCGA-ZS-A9CD-01A	73 years, male, white, stage:Stage II, dead, 1386 days	9901.4
TCGA-EP-A12J-01A	62 years, male, black or african american, stage:Stage I, alive, 570 days	9858.0
TCGA-2Y-A9H4-01A	68 years, male, black or african american, stage:Stage I, alive, 1452 days	9689.0
TCGA-DD-AAVP-01A	48 years, male, asian, stage:Stage I, alive, 2752 days	9667.9
TCGA-BC-A10Y-01A	76 years, male, white, stage:'--, dead, 711 days	9552.3
TCGA-DD-A73E-01A	66 years, male, white, stage:Stage I, alive, 44 days	9421.3
TCGA-XR-A8TG-01A	58 years, male, white, stage:Stage I, alive, 898 days	9339.6
TCGA-CC-5263-01A	35 years, male, asian, stage:Stage IIIA, dead, 129 days	9285.5
TCGA-DD-A1EL-01A	23 years, male, black or african american, stage:Stage II, dead, 415 days	9260.9
TCGA-G3-AAV4-01A	83 years, female, white, stage:Stage I, dead, 27 days	9246.3
TCGA-DD-AAD5-01A	54 years, male, asian, stage:Stage I, alive, 1345 days	9242.9
TCGA-G3-A3CJ-01A	52 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	9232.7
TCGA-KR-A7K2-01A	64 years, male, white, stage:Stage I, alive, 829 days	9166.3
TCGA-DD-A3A7-01A	67 years, male, stage:Stage IIIB, dead, 419 days	9124.1
TCGA-RG-A7D4-01A	69 years, male, black or african american, stage:Stage II, alive, 1098 days	9110.5
TCGA-DD-AAEE-01A	55 years, male, asian, stage:Stage I, alive, 810 days	9075.7
TCGA-DD-AAVY-01A	56 years, male, asian, stage:Stage IIIA, alive, 1970 days	9055.0
TCGA-FV-A23B-01A	70 years, female, white, stage:Stage II, dead, 1852 days	9021.7
TCGA-DD-AAW0-01A	54 years, male, asian, stage:Stage I, alive, 2015 days	9002.8
TCGA-ED-A66X-01A	35 years, male, asian, stage:Stage IIIA, alive, 406 days	8977.9
TCGA-DD-AAD1-01A	51 years, female, asian, stage:Stage I, alive, 564 days	8964.6
TCGA-G3-A3CK-01A	61 years, male, asian, stage:Stage I, alive, 585 days	8957.8
TCGA-DD-A3A5-01A	66 years, female, white, stage:Stage III, dead, 3125 days	8951.4
TCGA-GJ-A3OU-01A	59 years, male, white, stage:Stage I, alive, 879 days	8867.8
TCGA-DD-A4NO-01A	65 years, male, white, stage:Stage I, alive, 2245 days	8845.9
TCGA-G3-A7M5-01A	76 years, male, asian, stage:Stage I, alive, 447 days	8815.5
TCGA-DD-A11D-01A	57 years, female, white, stage:Stage I, dead, 1560 days	8811.2
TCGA-EP-A2KB-01A	46 years, female, white, stage:Stage I, dead, 596 days	8786.1
TCGA-2Y-A9GS-01A	58 years, male, white, stage:'--, dead, 724 days	8779.7
TCGA-FV-A3I0-01A	76 years, female, white, stage:Stage II, alive, 848 days	8704.2
TCGA-BD-A3EP-01A	75 years, female, black or african american, stage:Stage I, alive, 409 days	8691.3
TCGA-G3-A25T-01A	45 years, female, white, stage:Stage IIIA, alive, 1553 days	8657.7
TCGA-DD-AAVZ-01A	38 years, male, asian, stage:Stage I, alive, 1900 days	8637.7
TCGA-DD-A1EG-01A	76 years, male, white, stage:Stage I, dead, 1372 days	8571.5
TCGA-G3-A25V-01A	68 years, male, white, stage:Stage I, alive, 860 days	8534.1
TCGA-DD-A114-01A	42 years, male, black or african american, stage:Stage II, dead, 1149 days	8521.2
TCGA-BC-A69I-01A	69 years, male, white, stage:Stage I, alive, 387 days	8514.5
TCGA-ED-A8O6-01A	50 years, female, asian, stage:Stage IIIA, dead, 56 days	8463.7
TCGA-K7-A5RF-01A	64 years, male, white, stage:Stage I, alive, 631 days	8411.6
TCGA-DD-AACW-01A	43 years, male, asian, stage:Stage I, alive, 1424 days	8257.4
TCGA-CC-A8HU-01A	39 years, female, asian, stage:Stage IIIA, dead, 344 days	8230.1
TCGA-UB-A7MC-01A	59 years, male, white, stage:Stage IIIA, alive, 500 days	8165.4
TCGA-G3-A7M9-01A	70 years, male, white, stage:Stage IIIB, dead, 56 days	8155.5
TCGA-DD-AAVX-01A	38 years, male, asian, stage:Stage II, alive, 1718 days	8126.9
TCGA-ZP-A9CV-01A	59 years, male, white, stage:'--, dead, 1088 days	7983.1
TCGA-FV-A496-01A	84 years, female, white, stage:Stage I, alive, 10 days	7859.9
TCGA-DD-AADV-01A	50 years, male, asian, stage:Stage I, alive, 574 days	7854.4
TCGA-DD-A119-01A	40 years, male, asian, stage:Stage IV, dead, 223 days	7850.8
TCGA-BC-A10S-01A	81 years, male, white, stage:'--, dead, 1423 days	7776.2
TCGA-G3-A25S-01A	64 years, male, white, stage:Stage I, dead, 416 days	7714.3
TCGA-DD-AAD3-01A	43 years, male, asian, stage:Stage I, alive, 1295 days	7694.5
TCGA-G3-AAV7-01A	38 years, male, asian, stage:Stage II, alive, 361 days	7636.0
TCGA-DD-A113-01A	55 years, female, white, stage:Stage II, alive, 2425 days	7613.0
TCGA-DD-AAVQ-01A	38 years, male, asian, stage:Stage I, alive, 2728 days	7598.0
TCGA-DD-AADY-01A	55 years, female, asian, stage:Stage I, alive, 555 days	7571.0
TCGA-ED-A8O5-01A	59 years, female, asian, stage:Stage IIIA, alive, 406 days	7508.0
TCGA-EP-A3RK-01A	73 years, male, white, stage:Stage IIIA, alive, 363 days	7460.1
TCGA-DD-AAC9-01A	51 years, male, asian, stage:Stage I, alive, 347 days	7420.9
TCGA-DD-AAVV-01A	56 years, male, asian, stage:Stage II, alive, 2455 days	7325.8
TCGA-DD-AACU-01A	59 years, male, asian, stage:Stage I, alive, 1567 days	7236.9
TCGA-LG-A6GG-01A	79 years, female, white, stage:Stage II, alive, 387 days	7233.0
TCGA-CC-5260-01A	61 years, female, asian, stage:Stage IIIC, dead, 87 days	7186.6
TCGA-5R-AA1C-01A	57 years, male, white, stage:Stage II, alive, 520 days	7157.0
TCGA-BC-A5W4-01A	69 years, male, white, stage:Stage IIIA, dead, 547 days	7071.9
TCGA-DD-A1EJ-01A	71 years, female, white, stage:Stage IIIC, dead, 1005 days	7062.0
TCGA-FV-A2QR-01A	75 years, male, white, stage:Stage I, dead, 581 days	7054.2
TCGA-2Y-A9HB-01A	66 years, male, stage:Stage I, alive, 260 days	7036.7
TCGA-G3-AAV2-01A	50 years, male, white, stage:Stage I, alive, 372 days	7012.4
TCGA-DD-AACF-01A	68 years, male, asian, stage:Stage I, dead, 365 days	7012.3
TCGA-DD-AACL-01A	66 years, female, asian, stage:Stage I, dead, 107 days	7008.9
TCGA-DD-A1EI-01A	46 years, male, asian, stage:Stage I, alive, 183 days	6978.5
TCGA-G3-AAV5-01A	67 years, male, white, stage:Stage II, alive, 354 days	6960.8
TCGA-CC-A1HT-01A	50 years, male, asian, stage:Stage IIIA, dead, 101 days	6932.2
TCGA-5C-AAPD-01A	61 years, male, asian, stage:Stage II, alive, 20 days	6886.6
TCGA-DD-AADP-01A	45 years, male, asian, stage:Stage I, alive, 458 days	6884.2
TCGA-DD-A3A3-01A	45 years, male, asian, stage:Stage I, dead, 535 days	6879.6
TCGA-G3-A7M6-01A	60 years, female, white, stage:Stage I, alive, 632 days	6875.4
TCGA-ED-A7XO-01A	29 years, male, asian, stage:Stage IIIA, alive, 427 days	6864.9
TCGA-G3-A3CG-01A	80 years, male, white, stage:Stage I, alive, 673 days	6800.2
TCGA-O8-A75V-01A	54 years, male, stage:Stage I, alive, 538 days	6787.6
TCGA-CC-A9FW-01A	68 years, male, asian, stage:Stage IIIA, alive, 248 days	6742.1
TCGA-DD-AACP-01A	64 years, male, asian, stage:Stage I, alive, 415 days	6584.8
TCGA-UB-A7MF-01A	56 years, male, white, stage:Stage IIIA, dead, 214 days	6476.0
TCGA-G3-A25Y-01A	52 years, female, asian, stage:Stage I, dead, 452 days	6374.2
TCGA-DD-AADQ-01A	59 years, male, asian, stage:Stage II, alive, 436 days	6341.4
TCGA-ZS-A9CE-01A	79 years, female, white, stage:Stage II, alive, 1241 days	6254.8
TCGA-DD-AACY-01A	61 years, male, asian, stage:Stage I, alive, 1450 days	6251.3
TCGA-BW-A5NO-01A	50 years, male, black or african american, stage:Stage IIIA, alive, 20 days	6248.0
TCGA-G3-AAV3-01A	58 years, female, white, stage:Stage II, alive, 412 days	6222.1
TCGA-ED-A66Y-01A	51 years, female, asian, stage:Stage IIIA, dead, 296 days	6153.3
TCGA-DD-A39Z-01A	43 years, female, stage:Stage II, dead, 601 days	6147.3
TCGA-DD-AACH-01A	69 years, male, asian, stage:Stage II, dead, 195 days	6127.9
TCGA-2Y-A9H7-01A	81 years, female, white, stage:Stage I, alive, 1168 days	6091.5
TCGA-3K-AAZ8-01A	65 years, male, black or african american, stage:Stage IIIB, alive, 396 days	6074.7
TCGA-2Y-A9GY-01A	64 years, female, white, stage:Stage II, dead, 757 days	6061.6
TCGA-ZP-A9CZ-01A	72 years, male, asian, stage:'--, alive, 706 days	6022.1
TCGA-RC-A6M6-01A	75 years, male, white, stage:Stage II, alive, 9 days	5979.2
TCGA-DD-A4NN-01A	56 years, female, white, stage:Stage I, dead, 899 days	5958.3
TCGA-FV-A3R2-01A	75 years, male, white, stage:Stage I, dead, 194 days	5940.9
TCGA-ZP-A9D2-01A	51 years, male, white, stage:'--, dead, 765 days	5919.1
TCGA-FV-A3I1-01A	81 years, female, white, stage:Stage II, dead, 247 days	5758.6
TCGA-UB-A7ME-01A	51 years, male, asian, stage:Stage I, alive, 486 days	5705.9
TCGA-DD-AAC8-01A	72 years, male, asian, stage:Stage I, dead, 16 days	5700.3
TCGA-DD-AAE0-01A	45 years, female, asian, stage:Stage IIIA, alive, 555 days	5640.8
TCGA-DD-AACN-01A	32 years, male, asian, stage:Stage I, alive, 1302 days	5624.1
TCGA-CC-5259-01A	60 years, female, asian, stage:Stage IIIC, alive, 250 days	5590.0
TCGA-HP-A5N0-01A	90 years, female, stage:'--, dead, 752 days	5490.1
TCGA-DD-A3A9-01A	64 years, female, white, stage:Stage IVB, dead, 931 days	5476.1
TCGA-DD-AAE4-01A	49 years, female, asian, stage:Stage I, alive, 608 days	5419.1
TCGA-DD-AACK-01A	70 years, male, asian, stage:Stage I, alive, 9 days	5377.3
TCGA-GJ-A9DB-01A	68 years, male, white, stage:Stage I, dead, 67 days	5310.5
TCGA-MI-A75G-01A	63 years, male, white, stage:Stage II, alive, 698 days	5284.7
TCGA-MI-A75I-01A	61 years, male, black or african american, stage:'--, alive, 630 days	5242.6
TCGA-K7-A6G5-01A	66 years, male, white, stage:Stage I, alive, 512 days	5233.4
TCGA-G3-AAV0-01A	58 years, male, asian, stage:Stage I, alive, 476 days	5218.1
TCGA-CC-5262-01A	67 years, male, asian, stage:Stage IIIC, dead, 103 days	5218.0
TCGA-CC-A5UE-01A	48 years, male, asian, stage:Stage IIIB, dead, 272 days	5173.4
TCGA-CC-A3M9-01A	45 years, male, asian, stage:Stage IIIA, dead, 300 days	5166.5
TCGA-CC-5258-01A	48 years, male, asian, stage:Stage II, dead, 129 days	5106.1
TCGA-BC-A10W-01A	50 years, male, asian, stage:'--, dead, 91 days	5036.3
TCGA-DD-AACC-01A	61 years, male, asian, stage:Stage I, dead, 1685 days	5035.2
TCGA-CC-A7IJ-01A	56 years, male, asian, stage:Stage II, alive, 382 days	5034.5
TCGA-YA-A8S7-01A	68 years, male, white, stage:Stage IIIA, dead, 412 days	4999.5
TCGA-DD-A73C-01A	65 years, female, white, stage:Stage IIIA, alive, 701 days	4968.2
TCGA-CC-A7IG-01A	47 years, male, asian, stage:Stage II, dead, 299 days	4850.1
TCGA-DD-AACB-01A	74 years, female, asian, stage:Stage I, alive, 2324 days	4766.3
TCGA-DD-AAE7-01A	72 years, male, asian, stage:Stage I, alive, 644 days	4735.8
TCGA-DD-AADJ-01A	70 years, female, asian, stage:Stage I, alive, 1066 days	4730.0
TCGA-DD-AACD-01A	48 years, male, asian, stage:Stage I, dead, 381 days	4705.9
TCGA-EP-A2KA-01A	52 years, female, white, stage:Stage IIIA, dead, 627 days	4697.1
TCGA-BC-A217-01A	75 years, female, white, stage:Stage II, dead, 1397 days	4666.4
TCGA-G3-AAUZ-01A	48 years, male, stage:Stage I, alive, 480 days	4600.7
TCGA-KR-A7K7-01A	61 years, female, white, stage:Stage II, alive, 951 days	4563.1
TCGA-DD-AADS-01A	63 years, male, asian, stage:Stage I, alive, 474 days	4376.9
TCGA-T1-A6J8-01A	68 years, male, white, stage:'--, alive, 23 days	4331.3
TCGA-DD-AACO-01A	40 years, male, asian, stage:Stage I, alive, 1876 days	4259.3
TCGA-2Y-A9H3-01A	45 years, male, white, stage:Stage II, alive, 1516 days	4241.9
TCGA-CC-5264-01A	71 years, male, asian, stage:Stage IIIA, dead, 102 days	4227.7
TCGA-FV-A2QQ-01A	80 years, male, white, stage:Stage I, alive, 729 days	4138.8
TCGA-DD-AAVU-01A	46 years, male, asian, stage:Stage II, alive, 2202 days	4040.5
TCGA-CC-5261-01A	44 years, male, asian, stage:Stage II, dead, 97 days	3980.8
TCGA-UB-A7MB-01A	24 years, male, white, stage:Stage II, alive, 601 days	3905.1
TCGA-2Y-A9H1-01A	58 years, male, white, stage:Stage I, dead, 1229 days	3854.3
TCGA-DD-A3A1-01A	65 years, male, stage:Stage IIIA, dead, 233 days	3842.3
TCGA-DD-AADM-01A	58 years, male, asian, stage:Stage II, dead, 12 days	3761.0
TCGA-UB-A7MA-01A	62 years, female, white, stage:Stage II, alive, 848 days	3696.5
TCGA-DD-AACI-01A	69 years, male, asian, stage:Stage II, alive, 1618 days	3686.1
TCGA-DD-AADI-01A	43 years, female, asian, stage:Stage I, alive, 1085 days	3090.8
TCGA-FV-A4ZQ-01A	52 years, male, white, stage:Stage I, alive, 12 days	3073.6
TCGA-DD-A73G-01A	73 years, female, white, stage:Stage I, alive, 3478 days	2832.8
TCGA-FV-A495-01A	51 years, female, white, stage:Stage II, alive, 1 days	2826.5
TCGA-DD-AACG-01A	52 years, male, asian, stage:Stage II, dead, 469 days	2759.5
TCGA-CC-A7II-01A	54 years, male, asian, stage:Stage IIIA, alive, 399 days	2695.4
TCGA-DD-A39Y-01A	67 years, male, asian, stage:Stage I, dead, 171 days	2667.2
TCGA-ED-A5KG-01A	60 years, female, asian, stage:Stage II, alive, 854 days	2488.7
TCGA-ES-A2HS-01A	80 years, male, white, stage:Stage I, dead, 688 days	2487.8
TCGA-DD-AADN-01A	59 years, male, asian, stage:Stage I, alive, 898 days	2367.2
TCGA-DD-A39X-01A	78 years, female, white, stage:Stage I, dead, 1694 days	2241.5
TCGA-ES-A2HT-01A	54 years, male, black or african american, stage:Stage I, dead, 438 days	2115.0
TCGA-G3-AAV6-01A	53 years, female, white, stage:Stage IIIA, dead, 65 days	2086.0
TCGA-CC-A123-01A	24 years, female, asian, stage:Stage IIIA, alive, 219 days	1703.6
TCGA-DD-A39V-01A	77 years, male, white, stage:Stage II, dead, 643 days	1661.7
TCGA-DD-AADO-01A	55 years, male, asian, stage:Stage I, alive, 453 days	1522.6
TCGA-G3-A25X-01A	73 years, male, asian, stage:Stage II, alive, 1779 days	1471.4
TCGA-FV-A4ZP-01A	78 years, male, white, stage:Stage IIIA, dead, 2486 days	1437.1
TCGA-BC-A69H-01A	64 years, male, white, stage:Stage II, alive, 444 days	1155.3
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
471	Tumor	N/A
351	Tumor	N/A
472	Normal	N/A
231	Tumor	N/A
352	Normal	N/A
473	Tumor	N/A
111	Normal	N/A
232	Normal	N/A
353	Tumor	N/A
474	Normal	N/A
112	Tumor	N/A
354	Normal	N/A
113	Tumor	N/A
355	Tumor	N/A
114	Normal	N/A
356	Normal	N/A
477	Tumor	N/A
357	Tumor	N/A
478	Normal	N/A
358	Normal	N/A
911	Tumor	N/A
912	Normal	N/A
913	Tumor	N/A
914	Normal	N/A
915	Tumor	N/A
916	Normal	N/A
917	Tumor	N/A
918	Normal	N/A
481	Tumor	N/A
361	Tumor	N/A
482	Normal	N/A
362	Normal	N/A
483	Tumor	N/A
363	Tumor	N/A
484	Normal	N/A
364	Normal	N/A
123	Tumor	N/A
365	Tumor	N/A
124	Normal	N/A
366	Normal	N/A
487	Tumor	N/A
125	Tumor	N/A
367	Tumor	N/A
488	Normal	N/A
126	Normal	N/A
368	Normal	N/A
127	Tumor	N/A
128	Normal	N/A
921	Tumor	N/A
922	Normal	N/A
923	Tumor	N/A
924	Normal	N/A
925	Tumor	N/A
926	Normal	N/A
491	Tumor	N/A
492	Normal	N/A
493	Tumor	N/A
131	Tumor	N/A
494	Normal	N/A
132	Normal	N/A
375	Tumor	N/A
376	Normal	N/A
497	Tumor	N/A
135	Tumor	N/A
498	Normal	N/A
136	Normal	N/A
257	Tumor	N/A
137	Tumor	N/A
258	Normal	N/A
138	Normal	N/A
813	Tumor	N/A
814	Normal	N/A
815	Tumor	N/A
816	Normal	N/A
937	Tumor	N/A
817	Tumor	N/A
938	Normal	N/A
818	Normal	N/A
261	Tumor	N/A
141	Tumor	N/A
262	Normal	N/A
383	Tumor	N/A
142	Normal	N/A
384	Normal	N/A
385	Tumor	N/A
386	Normal	N/A
145	Tumor	N/A
387	Tumor	N/A
146	Normal	N/A
267	Tumor	N/A
388	Normal	N/A
147	Tumor	N/A
268	Normal	N/A
148	Normal	N/A
943	Tumor	N/A
823	Tumor	N/A
944	Normal	N/A
824	Normal	N/A
1022	Normal	N/A
1021	Tumor	N/A
391	Tumor	N/A
271	Tumor	N/A
392	Normal	N/A
272	Normal	N/A
393	Tumor	N/A
394	Normal	N/A
395	Tumor	N/A
396	Normal	N/A
277	Tumor	N/A
1016	Normal	N/A
278	Normal	N/A
1015	Tumor	N/A
1014	Normal	N/A
951	Tumor	N/A
1013	Tumor	N/A
952	Normal	N/A
953	Tumor	N/A
954	Normal	N/A
713	Tumor	N/A
955	Tumor	N/A
714	Normal	N/A
956	Normal	N/A
715	Tumor	N/A
957	Tumor	N/A
716	Normal	N/A
958	Normal	N/A
1032	Normal	N/A
1031	Tumor	N/A
161	Tumor	N/A
162	Normal	N/A
283	Tumor	N/A
284	Normal	N/A
285	Tumor	N/A
286	Normal	N/A
1028	Normal	N/A
1027	Tumor	N/A
1026	Normal	N/A
1025	Tumor	N/A
721	Tumor	N/A
963	Tumor	N/A
722	Normal	N/A
964	Normal	N/A
723	Tumor	N/A
965	Tumor	N/A
724	Normal	N/A
966	Normal	N/A
967	Tumor	N/A
968	Normal	N/A
727	Tumor	N/A
728	Normal	N/A
1044	Normal	N/A
1043	Tumor	N/A
1042	Normal	N/A
1041	Tumor	N/A
171	Tumor	N/A
172	Normal	N/A
297	Tumor	N/A
298	Normal	N/A
851	Tumor	N/A
852	Normal	N/A
975	Tumor	N/A
976	Normal	N/A
977	Tumor	N/A
615	Tumor	N/A
857	Tumor	N/A
978	Normal	N/A
616	Normal	N/A
737	Tumor	N/A
858	Normal	N/A
617	Tumor	N/A
738	Normal	N/A
618	Normal	N/A
185	Tumor	N/A
186	Normal	N/A
187	Tumor	N/A
188	Normal	N/A
981	Tumor	N/A
861	Tumor	N/A
982	Normal	N/A
741	Tumor	N/A
862	Normal	N/A
983	Tumor	N/A
742	Normal	N/A
863	Tumor	N/A
984	Normal	N/A
1046	Normal	N/A
743	Tumor	N/A
864	Normal	N/A
1045	Tumor	N/A
744	Normal	N/A
865	Tumor	N/A
745	Tumor	N/A
866	Normal	N/A
746	Normal	N/A
867	Tumor	N/A
868	Normal	N/A
627	Tumor	N/A
628	Normal	N/A
191	Tumor	N/A
192	Normal	N/A
195	Tumor	N/A
196	Normal	N/A
873	Tumor	N/A
874	Normal	N/A
513	Tumor	N/A
755	Tumor	N/A
514	Normal	N/A
635	Tumor	N/A
756	Normal	N/A
877	Tumor	N/A
515	Tumor	N/A
636	Normal	N/A
878	Normal	N/A
516	Normal	N/A
517	Tumor	N/A
518	Normal	N/A
881	Tumor	N/A
882	Normal	N/A
641	Tumor	N/A
883	Tumor	N/A
642	Normal	N/A
884	Normal	N/A
523	Tumor	N/A
524	Normal	N/A
525	Tumor	N/A
526	Normal	N/A
647	Tumor	N/A
527	Tumor	N/A
648	Normal	N/A
528	Normal	N/A
411	Tumor	N/A
412	Normal	N/A
533	Tumor	N/A
413	Tumor	N/A
534	Normal	N/A
414	Normal	N/A
535	Tumor	N/A
777	Tumor	N/A
415	Tumor	N/A
536	Normal	N/A
778	Normal	N/A
416	Normal	N/A
537	Tumor	N/A
538	Normal	N/A
661	Tumor	N/A
662	Normal	N/A
421	Tumor	N/A
663	Tumor	N/A
422	Normal	N/A
664	Normal	N/A
785	Tumor	N/A
423	Tumor	N/A
665	Tumor	N/A
786	Normal	N/A
424	Normal	N/A
545	Tumor	N/A
666	Normal	N/A
425	Tumor	N/A
546	Normal	N/A
426	Normal	N/A
427	Tumor	N/A
428	Normal	N/A
671	Tumor	N/A
672	Normal	N/A
431	Tumor	N/A
311	Tumor	N/A
432	Normal	N/A
553	Tumor	N/A
312	Normal	N/A
433	Tumor	N/A
554	Normal	N/A
313	Tumor	N/A
434	Normal	N/A
314	Normal	N/A
435	Tumor	N/A
436	Normal	N/A
557	Tumor	N/A
558	Normal	N/A
563	Tumor	N/A
443	Tumor	N/A
564	Normal	N/A
685	Tumor	N/A
444	Normal	N/A
686	Normal	N/A
445	Tumor	N/A
446	Normal	N/A
567	Tumor	N/A
447	Tumor	N/A
568	Normal	N/A
327	Tumor	N/A
448	Normal	N/A
328	Normal	N/A
571	Tumor	N/A
451	Tumor	N/A
572	Normal	N/A
331	Tumor	N/A
452	Normal	N/A
573	Tumor	N/A
211	Tumor	N/A
332	Normal	N/A
574	Normal	N/A
695	Tumor	N/A
212	Normal	N/A
696	Normal	N/A
213	Tumor	N/A
455	Tumor	N/A
697	Tumor	N/A
214	Normal	N/A
456	Normal	N/A
698	Normal	N/A
217	Tumor	N/A
218	Normal	N/A
461	Tumor	N/A
341	Tumor	N/A
462	Normal	N/A
221	Tumor	N/A
342	Normal	N/A
463	Tumor	N/A
222	Normal	N/A
343	Tumor	N/A
464	Normal	N/A
223	Tumor	N/A
344	Normal	N/A
465	Tumor	N/A
224	Normal	N/A
466	Normal	N/A
467	Tumor	N/A
468	Normal	N/A
227	Tumor	N/A
228	Normal	N/A
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA053928
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma