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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-ND4 is not prognostic in Ovary Serous Cystadenocarcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
12747.0
Number of samples
349
Samples
Sample
Description
pTPM
TCGA-24-1845-01A
42 years, female, white, stage:Stage IIIC, alive, 116 days
45772.4
TCGA-04-1338-01A
78 years, female, white, stage:Stage IIIC, alive, 1418 days
36948.5
TCGA-24-2297-01A
56 years, female, white, stage:Stage IIIC, dead, 1699 days
33820.5
TCGA-04-1331-01A
78 years, female, white, stage:Stage IIIC, dead, 1336 days
32223.1
TCGA-10-0933-01A
77 years, female, white, stage:Stage IIIC, dead, 446 days
30765.3
TCGA-13-1485-01A
48 years, female, white, stage:Stage IV, dead, 629 days
30601.9
TCGA-04-1536-01A
60 years, female, black or african american, stage:Stage IV, dead, 885 days
30327.7
TCGA-04-1361-01A
57 years, female, white, stage:Stage IIIB, alive, 989 days
28721.4
TCGA-24-1471-01A
60 years, female, white, stage:Stage IIIC, alive, 36 days
27695.8
TCGA-24-1565-01A
74 years, female, white, stage:Stage IIIC, dead, 312 days
26472.8
TCGA-61-2088-01A
51 years, female, white, stage:Stage IIIC, alive, 145 days
26429.6
TCGA-24-1105-01A
36 years, female, white, stage:Stage IIIC, dead, 1442 days
26386.2
TCGA-25-2392-01A
75 years, female, white, stage:Stage IV, dead, 31 days
26240.5
TCGA-24-1467-01A
51 years, female, white, stage:Stage IIIC, dead, 3224 days
26075.2
TCGA-13-1403-01A
48 years, female, white, stage:Stage IIIC, dead, 2345 days
26053.9
TCGA-04-1651-01A
53 years, female, white, stage:Stage IIIC, dead, 1102 days
24195.5
TCGA-13-0720-01A
48 years, female, white, stage:Stage IIIC, dead, 1355 days
24053.5
TCGA-25-1318-01A
54 years, female, white, stage:Stage IIIC, dead, 1064 days
23812.9
TCGA-04-1356-01A
62 years, female, white, stage:Stage IIC, dead, 1499 days
23288.1
TCGA-25-1322-01A
62 years, female, white, stage:Stage IV, dead, 91 days
23232.5
TCGA-24-1104-01A
56 years, female, white, stage:Stage IV, dead, 1933 days
23073.6
TCGA-04-1530-01A
68 years, female, white, stage:Stage IIIC, dead, 3622 days
22954.7
TCGA-24-1846-01A
45 years, female, stage:Stage IIIC, alive, 133 days
22268.5
TCGA-24-1425-01A
45 years, female, white, stage:Stage IIIC, alive, 181 days
22101.6
TCGA-57-1586-01A
66 years, female, white, stage:Stage IIIC, alive, 679 days
21885.6
TCGA-24-1430-01A
68 years, female, white, stage:Stage IIIC, dead, 863 days
21748.6
TCGA-29-1688-01A
39 years, female, white, stage:Stage IIIC, dead, 2400 days
21626.9
TCGA-24-1551-01A
53 years, female, white, stage:Stage IIIC, dead, 1579 days
21283.2
TCGA-13-1488-01A
59 years, female, white, stage:Stage IV, dead, 2154 days
21083.5
TCGA-24-1426-01A
43 years, female, white, stage:Stage IIIC, alive, 163 days
20986.5
TCGA-24-2289-01A
68 years, female, white, stage:Stage IV, dead, 2049 days
20982.4
TCGA-23-1120-01A
60 years, female, white, stage:Stage IIIC, alive, 130 days
20976.0
TCGA-24-1923-01A
51 years, female, white, stage:Stage IIIC, dead, 690 days
20964.7
TCGA-24-0968-01A
59 years, female, white, stage:Stage IIIC, dead, 598 days
20748.4
TCGA-23-1118-01A
45 years, female, white, stage:Stage IIIC, alive, 2616 days
20632.7
TCGA-24-2036-01A
50 years, female, white, stage:Stage IIIA, dead, 1947 days
20553.5
TCGA-13-1501-01A
50 years, female, white, stage:Stage IV, dead, 1314 days
20366.6
TCGA-VG-A8LO-01A
55 years, female, black or african american, stage:Stage IV, dead, 24 days
20221.0
TCGA-61-2104-01A
53 years, female, white, stage:Stage IIC, alive, 2338 days
20140.7
TCGA-13-0885-01A
70 years, female, white, stage:Stage IIIC, alive, 3388 days
19900.3
TCGA-24-2254-01A
66 years, female, white, stage:Stage IIIC, dead, 1736 days
19895.6
TCGA-13-0768-01A
73 years, female, white, stage:Stage IIIC, dead, 1784 days
19845.0
TCGA-24-2290-01A
56 years, female, white, stage:Stage IIIC, dead, 1102 days
19823.6
TCGA-61-1910-01A
56 years, female, white, stage:Stage IIC, alive, 1127 days
19795.1
TCGA-25-1321-01A
65 years, female, white, stage:Stage IIIC, dead, 1033 days
19718.2
TCGA-13-1495-01A
60 years, female, white, stage:Stage IIIC, dead, 2749 days
19622.9
TCGA-24-2035-01A
65 years, female, white, stage:Stage IIIC, dead, 857 days
19080.2
TCGA-25-2409-01A
71 years, female, white, stage:Stage IV, dead, 821 days
19024.6
TCGA-13-0714-01A
55 years, female, white, stage:Stage IV, dead, 189 days
18948.0
TCGA-24-2298-01A
55 years, female, white, stage:Stage IIIC, dead, 1620 days
18924.6
TCGA-24-0982-01A
77 years, female, white, stage:Stage IIIC, dead, 679 days
18862.4
TCGA-13-0886-01A
67 years, female, white, stage:Stage IIIC, alive, 4665 days
18835.2
TCGA-23-1030-01A
64 years, female, white, stage:Stage IIIC, alive, 886 days
18537.8
TCGA-OY-A56Q-01A
78 years, female, black or african american, stage:Stage IIA, alive, 576 days
18526.0
TCGA-09-2045-01A
50 years, female, asian, stage:Stage IV, dead, 1069 days
18481.0
TCGA-13-1408-01A
59 years, female, white, stage:Stage IIIC, dead, 1680 days
18404.9
TCGA-24-1928-01A
77 years, female, white, stage:Stage IIIC, dead, 336 days
18352.0
TCGA-20-1687-01A
46 years, female, white, stage:Stage IV, alive, 81 days
18327.7
TCGA-13-1509-01A
64 years, female, white, stage:Stage IV, alive, 2438 days
18291.7
TCGA-13-0724-01A
72 years, female, white, stage:Stage IV, dead, 83 days
18166.2
TCGA-13-1477-01A
49 years, female, white, stage:Stage IV, dead, 1662 days
18136.3
TCGA-23-1119-01A
64 years, female, white, stage:Stage IIIC, alive, 3953 days
18047.4
TCGA-36-1570-01A
49 years, female, white, stage:Stage IIIC, alive, 655 days
18028.9
TCGA-57-1584-01A
47 years, female, white, stage:Stage IIIC, alive, 643 days
18007.4
TCGA-13-1510-01A
62 years, female, white, stage:Stage IIIC, dead, 1359 days
17944.1
TCGA-04-1655-01A
49 years, female, white, stage:Stage IIIB, dead, 1380 days
17770.7
TCGA-24-0979-01A
53 years, female, white, stage:Stage IV, dead, 1264 days
17621.8
TCGA-30-1714-01A
68 years, female, white, stage:Stage IV, dead, 1158 days
17310.4
TCGA-25-1870-01A
59 years, female, white, stage:Stage IIIC, dead, 455 days
17279.2
TCGA-13-0888-01A
78 years, female, white, stage:Stage IIIC, dead, 2811 days
17245.2
TCGA-24-1416-01A
34 years, female, white, stage:Stage IV, alive, 194 days
17081.1
TCGA-30-1853-01A
58 years, female, white, stage:Stage IIIC, dead, 1103 days
17065.3
TCGA-04-1648-01A
57 years, female, white, stage:Stage IIIC, dead, 871 days
16965.6
TCGA-24-1103-01A
50 years, female, black or african american, stage:Stage IIIC, dead, 1646 days
16888.6
TCGA-29-1763-01A
43 years, female, black or african american, stage:Stage IIC, alive, 2032 days
16852.2
TCGA-30-1857-01A
64 years, female, white, stage:Stage IV, dead, 8 days
16800.6
TCGA-24-2293-01A
47 years, female, white, stage:'--, dead, 506 days
16736.3
TCGA-24-2271-01A
55 years, female, asian, stage:Stage IIIC, dead, 962 days
16685.3
TCGA-13-0726-01A
55 years, female, white, stage:Stage IIIC, dead, 949 days
16623.2
TCGA-24-1546-01A
46 years, female, white, stage:Stage IIIC, dead, 1955 days
16585.6
TCGA-13-1404-01A
48 years, female, white, stage:Stage IIIC, alive, 2469 days
16578.1
TCGA-24-2026-01A
79 years, female, white, stage:Stage IIIC, dead, 1059 days
16531.9
TCGA-24-1423-01A
61 years, female, white, stage:Stage IIIC, alive, 190 days
16517.8
TCGA-24-1843-01A
66 years, female, white, stage:Stage IIIC, alive, 106 days
16302.4
TCGA-13-0800-01A
52 years, female, white, stage:Stage IIIC, alive, 2661 days
16154.1
TCGA-10-0928-01A
71 years, female, white, stage:Stage IIIC, dead, 563 days
16054.3
TCGA-25-1329-01A
76 years, female, white, stage:Stage IIIC, dead, 457 days
16023.7
TCGA-25-1313-01A
62 years, female, white, stage:Stage IV, dead, 820 days
15970.4
TCGA-24-1844-01A
64 years, female, white, stage:Stage IIIC, alive, 113 days
15905.5
TCGA-25-1319-01A
73 years, female, white, stage:Stage IIIC, dead, 1977 days
15881.5
TCGA-24-1435-01A
57 years, female, white, stage:Stage IIIC, dead, 1324 days
15768.1
TCGA-31-1950-01A
76 years, female, white, stage:Stage IIIC, alive, 571 days
15757.5
TCGA-13-1411-01A
81 years, female, white, stage:Stage IIIC, dead, 531 days
15735.0
TCGA-13-1505-01A
63 years, female, white, stage:Stage IIIC, alive, 1998 days
15723.0
TCGA-24-2281-01A
68 years, female, white, stage:Stage IIA, alive, 1357 days
15670.4
TCGA-61-2109-01A
40 years, female, white, stage:Stage IIIC, dead, 629 days
15414.5
TCGA-13-1483-01A
61 years, female, white, stage:Stage IIIC, dead, 895 days
15397.7
TCGA-13-0797-01A
49 years, female, white, stage:Stage IIIC, alive, 2121 days
15345.3
TCGA-24-1603-01A
53 years, female, white, stage:Stage IIIB, dead, 2742 days
15288.2
TCGA-04-1365-01A
87 years, female, white, stage:Stage IIIB, alive, 947 days
15226.7
TCGA-09-1673-01A
50 years, female, white, stage:Stage IV, alive, 92 days
15206.0
TCGA-24-1557-01A
49 years, female, white, stage:Stage IIIC, dead, 1213 days
15205.6
TCGA-25-2042-01A
60 years, female, american indian or alaska native, stage:Stage IIIC, dead, 396 days
15197.3
TCGA-23-2077-01A
45 years, female, white, stage:Stage IIIC, alive, 3525 days
15192.5
TCGA-25-1635-01A
71 years, female, white, stage:Stage IIIC, dead, 1583 days
15190.7
TCGA-13-A5FT-01A
67 years, female, black or african american, stage:Stage IIIC, alive, 2143 days
15031.0
TCGA-25-2396-01A
71 years, female, white, stage:Stage IIIC, dead, 92 days
14969.3
TCGA-13-2060-01A
51 years, female, white, stage:Stage IV, alive, 2369 days
14854.0
TCGA-13-1511-01A
52 years, female, asian, stage:Stage IV, dead, 1650 days
14786.3
TCGA-13-1498-01A
73 years, female, white, stage:Stage IIIC, dead, 2012 days
14709.9
TCGA-24-1464-01A
70 years, female, white, stage:Stage IIIC, dead, 379 days
14650.7
TCGA-29-1778-01A
77 years, female, white, stage:Stage IIIC, alive, 454 days
14643.5
TCGA-57-1583-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 346 days
14629.1
TCGA-24-1422-01A
82 years, female, black or african american, stage:Stage IIIC, dead, 23 days
14616.8
TCGA-23-2078-01A
66 years, female, white, stage:Stage IIIC, alive, 2661 days
14472.3
TCGA-24-1427-01A
58 years, female, stage:Stage IIIC, alive, 147 days
14409.9
TCGA-09-1670-01A
57 years, female, white, stage:Stage IIIA, alive, 547 days
14363.0
TCGA-61-2110-01A
56 years, female, white, stage:Stage IIIC, dead, 1354 days
14319.4
TCGA-04-1362-01A
59 years, female, white, stage:Stage IIC, dead, 1348 days
14300.2
TCGA-24-2288-01A
70 years, female, white, stage:Stage IIIC, dead, 25 days
14286.6
TCGA-31-1951-01A
58 years, female, white, stage:Stage IIIC, alive, 684 days
14253.2
TCGA-24-1434-01A
59 years, female, white, stage:Stage IIIC, dead, 568 days
14238.4
TCGA-24-2280-01A
74 years, female, white, stage:Stage IIIC, alive, 2143 days
14194.1
TCGA-61-2097-01A
71 years, female, white, stage:Stage IIC, alive, 1844 days
14170.3
TCGA-25-1323-01A
72 years, female, white, stage:Stage IIIC, dead, 395 days
14157.1
TCGA-13-1496-01A
65 years, female, white, stage:Stage IIIC, dead, 129 days
14037.6
TCGA-30-1866-01A
61 years, female, white, stage:Stage IV, dead, 1114 days
13949.3
TCGA-61-2111-01A
61 years, female, white, stage:Stage IV, alive, 3825 days
13919.7
TCGA-57-1582-01A
50 years, female, white, stage:Stage IIIC, dead, 731 days
13867.7
TCGA-24-2261-01A
76 years, female, white, stage:Stage IIIC, dead, 24 days
13836.9
TCGA-25-1326-01A
61 years, female, white, stage:Stage IIIC, dead, 1249 days
13821.7
TCGA-61-1918-01A
45 years, female, white, stage:Stage IV, dead, 479 days
13703.3
TCGA-13-1492-01A
66 years, female, white, stage:Stage IIIC, dead, 3819 days
13689.6
TCGA-29-2427-01A
60 years, female, white, stage:Stage IIIC, alive, 1900 days
13491.2
TCGA-25-1328-01A
38 years, female, white, stage:Stage IIIC, dead, 2009 days
13486.9
TCGA-13-1512-01A
49 years, female, white, stage:Stage IIIC, alive, 442 days
13480.2
TCGA-04-1347-01A
81 years, female, white, stage:Stage IV, alive, 1919 days
13443.0
TCGA-09-1662-01A
58 years, female, white, stage:Stage IV, dead, 2717 days
13430.7
TCGA-24-1604-01A
66 years, female, white, stage:Stage IIIC, dead, 2688 days
13406.7
TCGA-59-2348-01A
59 years, female, white, stage:Stage IIIC, alive, 5481 days
13297.0
TCGA-13-0762-01A
65 years, female, white, stage:Stage IIIC, alive, 3400 days
13135.9
TCGA-24-1930-01A
53 years, female, white, stage:Stage IIIC, dead, 2467 days
13129.4
TCGA-25-2400-01A
76 years, female, white, stage:Stage IIIC, dead, 1278 days
13109.3
TCGA-24-1413-01A
51 years, female, white, stage:Stage IIIC, alive, 192 days
13102.1
TCGA-13-1405-01A
49 years, female, white, stage:Stage IV, dead, 868 days
13098.3
TCGA-24-1924-01A
65 years, female, white, stage:Stage IIIC, dead, 919 days
13070.6
TCGA-04-1542-01A
52 years, female, white, stage:Stage IIIB, dead, 2561 days
13001.7
TCGA-23-1122-01A
53 years, female, white, stage:Stage IIIC, dead, 1189 days
12957.0
TCGA-13-1409-01A
73 years, female, white, stage:Stage IIIC, dead, 1742 days
12953.3
TCGA-31-1944-01A
47 years, female, white, stage:Stage IIIC, alive, 1386 days
12910.4
TCGA-31-1946-01A
30 years, female, stage:Stage IIIC, alive, 918 days
12897.1
TCGA-23-1116-01A
83 years, female, white, stage:Stage IIIC, dead, 592 days
12843.4
TCGA-24-1616-01A
56 years, female, white, stage:Stage IIIC, dead, 1163 days
12840.4
TCGA-29-1694-01A
45 years, female, white, stage:Stage IIIC, dead, 1187 days
12820.8
TCGA-13-1497-01A
47 years, female, white, stage:Stage IIIC, alive, 3871 days
12772.5
TCGA-25-1320-01A
65 years, female, white, stage:Stage IIIC, dead, 1155 days
12740.1
TCGA-61-2113-01A
53 years, female, white, stage:Stage IIC, dead, 676 days
12695.4
TCGA-36-1571-01A
53 years, female, white, stage:Stage IIIB, dead, 695 days
12639.3
TCGA-13-1407-01A
51 years, female, white, stage:Stage IIIC, alive, 2534 days
12490.0
TCGA-25-1315-01A
50 years, female, white, stage:Stage IIIC, dead, 1583 days
12446.6
TCGA-24-1847-01A
45 years, female, white, stage:Stage IV, alive, 343 days
12370.6
TCGA-36-1568-01A
52 years, female, stage:Stage IIIC, alive, 875 days
12356.2
TCGA-24-2267-01A
58 years, female, white, stage:Stage IIB, dead, 1446 days
12278.0
TCGA-57-1993-01A
56 years, female, white, stage:Stage IIIC, alive, 763 days
12240.6
TCGA-61-1900-01A
51 years, female, black or african american, stage:Stage IIIB, alive, 176 days
12162.3
TCGA-57-1994-01A
63 years, female, white, stage:'--, alive, 761 days
12148.6
TCGA-57-1585-01A
57 years, female, white, stage:Stage IIIC, dead, 53 days
12123.9
TCGA-29-1705-01A
47 years, female, white, stage:Stage IIIC, dead, 555 days
12074.2
TCGA-24-2020-01A
67 years, female, white, stage:Stage IIIC, dead, 4624 days
12032.0
TCGA-25-2398-01A
71 years, female, white, stage:Stage IIIC, dead, 1369 days
11983.3
TCGA-13-0906-01A
50 years, female, white, stage:Stage IIIC, alive, 3619 days
11897.9
TCGA-WR-A838-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 304 days
11881.8
TCGA-25-2399-01A
80 years, female, white, stage:Stage IIIC, dead, 608 days
11879.4
TCGA-61-2101-01A
55 years, female, white, stage:Stage IIIC, dead, 1688 days
11855.5
TCGA-61-1737-01A
42 years, female, white, stage:Stage IV, alive, 1364 days
11844.8
TCGA-25-1623-01A
71 years, female, white, stage:Stage IV, dead, 565 days
11810.7
TCGA-24-1469-01A
71 years, female, white, stage:Stage IIIC, alive, 277 days
11805.7
TCGA-13-0916-01A
49 years, female, white, stage:Stage IIIC, alive, 1785 days
11719.4
TCGA-24-2023-01A
54 years, female, white, stage:Stage IIIA, dead, 1364 days
11706.3
TCGA-10-0937-01A
44 years, female, white, stage:Stage IIIC, dead, 608 days
11693.9
TCGA-23-1023-01A
65 years, female, white, stage:Stage IIIC, alive, 1233 days
11622.2
TCGA-20-1686-01A
75 years, female, white, stage:Stage IIIC, alive, 89 days
11583.7
TCGA-30-1861-01A
74 years, female, white, stage:Stage IIIC, dead, 1058 days
11553.3
TCGA-29-1783-01A
58 years, female, white, stage:Stage IIIC, alive, 220 days
11472.6
TCGA-24-1558-01A
73 years, female, white, stage:Stage IIIC, dead, 594 days
11406.0
TCGA-59-2355-01A
58 years, female, white, stage:Stage IV, dead, 65 days
11348.4
TCGA-23-1109-01A
62 years, female, white, stage:Stage IIIC, dead, 1562 days
11335.3
TCGA-13-0883-01A
61 years, female, white, stage:Stage IIIC, dead, 2097 days
11311.4
TCGA-24-2027-01A
51 years, female, white, stage:Stage IV, dead, 3337 days
11223.1
TCGA-61-1995-01A
43 years, female, white, stage:Stage IIIC, alive, 61 days
11154.9
TCGA-61-1741-01A
76 years, female, white, stage:Stage IIIB, dead, 1024 days
11145.2
TCGA-61-2000-01A
67 years, female, white, stage:Stage IIIC, alive, 441 days
11135.6
TCGA-24-1560-01A
51 years, female, white, stage:Stage IIIC, dead, 1341 days
11113.1
TCGA-24-1419-01A
62 years, female, white, stage:Stage IIIC, alive, 239 days
11044.8
TCGA-61-1998-01A
48 years, female, white, stage:Stage IIIC, alive, 168 days
11016.7
TCGA-04-1519-01A
48 years, female, stage:Stage IIIC, alive, 24 days
10919.1
TCGA-59-2354-01A
63 years, female, white, stage:Stage IIIC, dead, 1046 days
10893.9
TCGA-36-1580-01A
82 years, female, stage:Stage IIIC, dead, 737 days
10704.0
TCGA-24-1552-01A
77 years, female, white, stage:Stage IIIC, dead, 1259 days
10701.1
TCGA-25-1630-01A
73 years, female, white, stage:Stage IIIC, dead, 1162 days
10649.9
TCGA-04-1364-01A
61 years, female, white, stage:Stage IIIC, dead, 1024 days
10649.0
TCGA-61-1725-01A
40 years, female, white, stage:Stage IIIC, alive, 956 days
10598.8
TCGA-24-2038-01A
68 years, female, white, stage:Stage IIIA, dead, 1354 days
10598.2
TCGA-23-1123-01A
59 years, female, white, stage:Stage IIIC, dead, 1018 days
10583.9
TCGA-09-1669-01A
54 years, female, white, stage:Stage IIIA, alive, 928 days
10547.3
TCGA-29-2414-01A
75 years, female, white, stage:Stage IIIC, dead, 2621 days
10411.2
TCGA-23-1111-01A
63 years, female, white, stage:Stage IIIC, alive, 98 days
10404.2
TCGA-29-2428-01A
58 years, female, white, stage:Stage IIIC, alive, 1372 days
10402.9
TCGA-25-2401-01A
64 years, female, white, stage:Stage IIIC, dead, 90 days
10391.8
TCGA-59-2363-01A
40 years, female, asian, stage:Stage IIIA, alive, 165 days
10360.6
TCGA-5X-AA5U-01A
61 years, female, black or african american, stage:Stage IIC, alive, 361 days
10293.2
TCGA-13-1489-01A
70 years, female, white, stage:Stage IIIC, dead, 2553 days
10246.0
TCGA-24-1842-01A
49 years, female, white, stage:Stage IIIC, alive, 253 days
10144.9
TCGA-09-1666-01A
57 years, female, white, stage:Stage IIIC, alive, 1752 days
10124.3
TCGA-25-1317-01A
66 years, female, white, stage:Stage IIIC, dead, 61 days
10032.8
TCGA-31-1953-01A
52 years, female, asian, stage:Stage IIIC, alive, 204 days
9969.7
TCGA-24-1550-01A
49 years, female, white, stage:Stage IIIC, dead, 1249 days
9924.6
TCGA-25-1312-01A
69 years, female, white, stage:Stage IV, dead, 31 days
9907.1
TCGA-24-1428-01A
50 years, female, white, stage:Stage IIIC, alive, 529 days
9898.7
TCGA-36-1581-01A
63 years, female, white, stage:Stage IIC, alive, 751 days
9883.3
TCGA-61-2092-01A
57 years, female, white, stage:Stage IIIC, alive, 1573 days
9875.9
TCGA-29-1695-01A
62 years, female, white, stage:Stage IIIC, dead, 1229 days
9824.9
TCGA-24-1562-01A
67 years, female, white, stage:Stage IIIC, dead, 1384 days
9809.6
TCGA-24-1474-01A
57 years, female, black or african american, stage:Stage IIIC, dead, 676 days
9803.5
TCGA-61-2102-01A
74 years, female, white, stage:Stage IIIC, dead, 197 days
9793.5
TCGA-10-0927-01A
65 years, female, stage:Stage IIIC, dead, 2490 days
9769.5
TCGA-13-1487-01A
74 years, female, white, stage:Stage IV, dead, 681 days
9758.8
TCGA-25-1634-01A
75 years, female, white, stage:Stage IIIC, dead, 1091 days
9754.2
TCGA-59-2350-01A
44 years, female, stage:Stage IV, dead, 679 days
9741.3
TCGA-13-0795-01A
66 years, female, white, stage:Stage IIIC, dead, 619 days
9737.5
TCGA-25-1626-01A
65 years, female, white, stage:Stage IIIC, dead, 518 days
9721.3
TCGA-24-1431-01A
67 years, female, white, stage:Stage IIIC, dead, 583 days
9586.6
TCGA-29-1785-01A
55 years, female, white, stage:Stage IIIC, dead, 1104 days
9584.7
TCGA-61-2003-01A
53 years, female, white, stage:Stage IIIC, alive, 122 days
9578.8
TCGA-59-2351-01A
51 years, female, white, stage:Stage IIIC, alive, 3532 days
9482.3
TCGA-24-2033-01A
87 years, female, white, stage:Stage IIIC, dead, 562 days
9449.9
TCGA-61-1907-01A
63 years, female, white, stage:Stage IIIC, alive, 952 days
9413.5
TCGA-13-0923-01A
74 years, female, white, stage:Stage IIIC, alive, 2547 days
9346.4
TCGA-13-0920-01A
65 years, female, white, stage:Stage IIIC, dead, 1484 days
9287.4
TCGA-24-1424-01A
67 years, female, white, stage:Stage IIIC, alive, 183 days
9250.8
TCGA-61-1733-01A
71 years, female, white, stage:Stage IIIC, alive, 967 days
9183.6
TCGA-29-1710-01A
54 years, female, white, stage:Stage IIIC, dead, 951 days
9179.9
TCGA-13-0765-01A
50 years, female, white, stage:Stage IIIC, dead, 1389 days
9127.2
TCGA-25-1628-01A
67 years, female, white, stage:Stage IIIC, dead, 627 days
9126.2
TCGA-13-0804-01A
73 years, female, white, stage:Stage IIIC, dead, 1073 days
9114.1
TCGA-31-1959-01A
49 years, female, white, stage:Stage IV, alive, 67 days
9084.3
TCGA-36-1577-01A
43 years, female, asian, stage:Stage IIC, alive, 783 days
9079.3
TCGA-24-1553-01A
53 years, female, white, stage:Stage IIIB, dead, 1767 days
9066.3
TCGA-30-1862-01A
65 years, female, white, stage:Stage IV, dead, 186 days
8871.0
TCGA-30-1892-01A
52 years, female, white, stage:Stage IIIC, dead, 1484 days
8867.4
TCGA-13-0725-01A
44 years, female, white, stage:Stage IIIC, dead, 377 days
8853.6
TCGA-61-1919-01A
58 years, female, white, stage:Stage IIIC, dead, 1161 days
8840.4
TCGA-13-1499-01A
56 years, female, white, stage:Stage IIIC, alive, 3500 days
8789.6
TCGA-24-1563-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1451 days
8749.1
TCGA-31-1956-01A
60 years, female, white, stage:Stage IIIB, alive, 1342 days
8621.2
TCGA-23-1027-01A
48 years, female, white, stage:Stage IIIC, dead, 976 days
8518.4
TCGA-09-2051-01A
42 years, female, white, stage:Stage IIIC, alive, 1919 days
8511.1
TCGA-04-1350-01A
46 years, female, white, stage:Stage IIIC, dead, 1946 days
8476.9
TCGA-24-1417-01A
54 years, female, white, stage:Stage IV, alive, 238 days
8458.2
TCGA-20-1682-01A
56 years, female, white, stage:Stage IIIC, alive, 837 days
8457.0
TCGA-61-2009-01A
65 years, female, white, stage:Stage IIIC, alive, 1212 days
8442.5
TCGA-25-1631-01A
73 years, female, white, stage:Stage IIIC, dead, 9 days
8431.0
TCGA-29-1769-01A
40 years, female, white, stage:Stage IIIC, alive, 699 days
8304.1
TCGA-25-2404-01A
38 years, female, american indian or alaska native, stage:Stage IIIC, dead, 883 days
8260.4
TCGA-13-0891-01A
73 years, female, white, stage:Stage IV, dead, 3128 days
8259.1
TCGA-23-1809-01A
63 years, female, white, stage:Stage IIC, alive, 16 days
8231.5
TCGA-23-1024-01A
52 years, female, white, stage:Stage IV, alive, 468 days
8210.6
TCGA-59-A5PD-01A
55 years, female, black or african american, stage:Stage IC, dead, 624 days
8195.8
TCGA-23-1110-01A
42 years, female, white, stage:Stage IIIC, alive, 1658 days
8119.8
TCGA-13-0887-01A
42 years, female, white, stage:Stage IIIC, dead, 2028 days
8106.4
TCGA-61-2098-01A
62 years, female, white, stage:Stage IIIC, alive, 1993 days
8091.5
TCGA-36-1569-01A
52 years, female, white, stage:Stage IIIC, alive, 885 days
8012.5
TCGA-24-1418-01A
68 years, female, white, stage:Stage IIIC, alive, 243 days
7960.3
TCGA-29-1768-01A
50 years, female, white, stage:Stage IV, dead, 952 days
7959.8
TCGA-61-2002-01A
46 years, female, white, stage:Stage IIIC, alive, 547 days
7885.0
TCGA-61-1724-01A
47 years, female, white, stage:Stage IIIC, dead, 637 days
7843.5
TCGA-13-1410-01A
57 years, female, white, stage:Stage IV, alive, 2464 days
7840.8
TCGA-04-1332-01A
70 years, female, white, stage:Stage IIIC, dead, 1247 days
7826.0
TCGA-04-1514-01A
45 years, female, white, stage:Stage IIIA, dead, 1720 days
7805.1
TCGA-61-1721-01A
38 years, female, white, stage:Stage IV, alive, 338 days
7794.0
TCGA-25-2393-01A
81 years, female, white, stage:Stage IIIC, dead, 1157 days
7792.0
TCGA-13-0730-01A
71 years, female, white, stage:Stage IIIC, dead, 542 days
7723.4
TCGA-29-A5NZ-01A
66 years, female, black or african american, stage:Stage IIIC, dead, 1088 days
7642.7
TCGA-61-1728-01A
59 years, female, white, stage:Stage IV, alive, 848 days
7539.3
TCGA-23-2084-01A
45 years, female, white, stage:Stage IV, dead, 1516 days
7532.7
TCGA-04-1343-01A
72 years, female, white, stage:Stage IV, dead, 361 days
7437.5
TCGA-23-1028-01A
43 years, female, white, stage:Stage IIIC, alive, 1503 days
7404.8
TCGA-29-1762-01A
59 years, female, white, stage:Stage IV, dead, 2634 days
7352.2
TCGA-29-1711-01A
45 years, female, black or african american, stage:Stage IIIC, alive, 1053 days
7320.5
TCGA-24-1850-01A
72 years, female, white, stage:Stage IIIC, alive, 168 days
7278.8
TCGA-29-1761-01A
80 years, female, asian, stage:Stage IIIC, dead, 528 days
7233.1
TCGA-29-1691-01A
51 years, female, white, stage:Stage IIIC, dead, 1470 days
7188.5
TCGA-09-2048-01A
63 years, female, white, stage:Stage IIIC, dead, 138 days
7133.5
TCGA-10-0931-01A
44 years, female, white, stage:Stage IIIC, dead, 1000 days
7125.0
TCGA-29-1693-01A
72 years, female, white, stage:Stage IIIC, alive, 3096 days
7109.2
TCGA-29-1784-01A
55 years, female, white, stage:Stage IIIC, alive, 163 days
6955.8
TCGA-24-2024-01A
72 years, female, black or african american, stage:Stage IIIC, dead, 1769 days
6918.6
TCGA-09-0364-01A
80 years, female, white, stage:Stage IIC, dead, 887 days
6780.8
TCGA-29-1696-01A
43 years, female, white, stage:Stage IIIC, dead, 1032 days
6580.7
TCGA-61-2008-01A
40 years, female, asian, stage:Stage IIC, alive, 932 days
6541.1
TCGA-36-1576-01A
76 years, female, stage:Stage IIIC, alive, 915 days
6511.5
TCGA-09-2054-01A
58 years, female, black or african american, stage:Stage IIIC, dead, 637 days
6505.2
TCGA-59-2352-01A
78 years, female, white, stage:Stage IIIC, dead, 286 days
6427.9
TCGA-29-1690-01A
66 years, female, white, stage:Stage IIIC, dead, 1448 days
6218.3
TCGA-24-0966-01A
78 years, female, black or african american, stage:Stage IIIC, alive, 232 days
6180.5
TCGA-29-1770-01A
54 years, female, white, stage:Stage IIIC, alive, 741 days
6164.4
TCGA-61-1911-01A
55 years, female, white, stage:Stage IIA, alive, 1293 days
6021.5
TCGA-25-1316-01A
55 years, female, white, stage:Stage IIIC, dead, 1279 days
5884.6
TCGA-61-1914-01A
65 years, female, stage:Stage IIIC, alive, 1722 days
5875.9
TCGA-25-1627-01A
73 years, female, white, stage:Stage IIIC, dead, 394 days
5806.5
TCGA-29-1776-01A
63 years, female, black or african american, stage:Stage IIIC, alive, 360 days
5805.7
TCGA-09-0366-01A
55 years, female, white, stage:Stage IIIC, dead, 1757 days
5710.4
TCGA-29-1766-01A
74 years, female, white, stage:Stage IIIC, dead, 1199 days
5527.5
TCGA-29-1774-01A
82 years, female, white, stage:Stage IIIC, alive, 527 days
5433.8
TCGA-24-1549-01A
58 years, female, white, stage:Stage IIIB, dead, 1721 days
5368.9
TCGA-09-0369-01A
56 years, female, white, stage:Stage IIIC, dead, 1082 days
5346.3
TCGA-36-1574-01A
48 years, female, asian, stage:Stage IIIC, alive, 686 days
5206.5
TCGA-23-1107-01A
59 years, female, white, stage:Stage IV, dead, 9 days
5121.5
TCGA-24-1567-01A
54 years, female, white, stage:Stage IIIB, dead, 524 days
5066.0
TCGA-25-1633-01A
64 years, female, white, stage:Stage IIIC, dead, 1891 days
5041.1
TCGA-13-0897-01A
54 years, female, white, stage:Stage IIIC, dead, 2182 days
5015.5
TCGA-30-1718-01A
44 years, female, white, stage:Stage IIIC, dead, 1579 days
5005.3
TCGA-04-1341-01A
85 years, female, white, stage:'--, alive, 33 days
4946.6
TCGA-23-1113-01A
48 years, female, white, stage:Stage IV, dead, 949 days
4918.8
TCGA-61-1738-01A
60 years, female, black or african american, stage:Stage IIIC, dead, 1089 days
4880.6
TCGA-29-2425-01A
60 years, female, white, stage:Stage IIIC, alive, 1977 days
4797.3
TCGA-13-0911-01A
55 years, female, white, stage:Stage IV, dead, 1355 days
4783.6
TCGA-20-1683-01A
65 years, female, white, stage:Stage IIIC, alive, 772 days
4778.6
TCGA-13-1506-01A
45 years, female, white, stage:Stage IIIC, dead, 1039 days
4775.8
TCGA-29-1701-01A
56 years, female, white, stage:Stage IIIC, dead, 515 days
4762.6
TCGA-61-2012-01A
81 years, female, white, stage:Stage IIC, alive, 932 days
4756.3
TCGA-20-0987-01A
61 years, female, white, stage:Stage IIIC, dead, 701 days
4754.0
TCGA-29-1781-01A
69 years, female, white, stage:Stage IIIC, alive, 255 days
4729.5
TCGA-23-1022-01A
67 years, female, white, stage:Stage IIIC, dead, 1511 days
4690.0
TCGA-29-1697-01A
62 years, female, white, stage:Stage IIIC, dead, 949 days
4668.6
TCGA-30-1891-01A
61 years, female, white, stage:Stage IIIC, dead, 914 days
4333.3
TCGA-13-0727-01A
71 years, female, white, stage:Stage IIIC, dead, 462 days
4322.4
TCGA-25-1632-01A
68 years, female, white, stage:Stage IV, dead, 1799 days
4316.8
TCGA-30-1860-01A
58 years, female, white, stage:Stage IIIC, dead, 1366 days
4260.4
TCGA-09-0367-01A
67 years, female, native hawaiian or other pacific islander, stage:Stage IIIC, dead, 547 days
4259.3
TCGA-13-0924-01A
45 years, female, white, stage:Stage IV, alive, 2614 days
3882.2
TCGA-10-0938-01A
80 years, female, white, stage:Stage IIIC, dead, 636 days
3793.4
TCGA-29-1703-01A
56 years, female, black or african american, stage:Stage IIIC, dead, 1815 days
3592.0
TCGA-29-1777-01A
47 years, female, white, stage:Stage IIIC, alive, 374 days
3475.1
TCGA-24-1544-01A
71 years, female, black or african american, stage:Stage IIIC, dead, 820 days
3268.2
TCGA-13-0766-01A
42 years, female, white, stage:Stage IIIC, dead, 1725 days
2844.6
TCGA-25-1877-01A
81 years, female, white, stage:Stage IIIC, dead, 730 days
2525.0
TCGA-20-0991-01A
78 years, female, white, stage:Stage IIB, alive, 797 days
2081.5
TCGA-13-1507-01A
77 years, female, white, stage:Stage IIIC, dead, 1993 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MT-ND4 is not prognostic in Ovary Serous Cystadenocarcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average pTPM
7690.4
Number of samples
81
Samples
Sample
Description
pTPM
DO46518
62 years, female, NA, stage:III, alive, 2960 days
29484.7
DO46428
59 years, female, NA, stage:IV, alive, 2644 days
21401.1
DO46546
73 years, female, NA, stage:III, dead, 1889 days
18458.3
DO46408
56 years, female, NA, stage:III, dead, 489 days
16440.0
DO46400
70 years, female, NA, stage:III, dead, 719 days
16182.6
DO46404
55 years, female, NA, stage:III, dead, 690 days
15146.3
DO46329
52 years, female, NA, stage:III, dead, 1699 days
13864.1
DO46566
78 years, female, NA, stage:III, dead, 673 days
13102.8
DO46438
55 years, female, NA, stage:IV, alive, 2227 days
12191.6
DO46331
72 years, female, NA, stage:III, dead, 612 days
12173.1
DO46382
62 years, female, NA, stage:IV, dead, 311 days
11710.8
DO46561
52 years, female, NA, stage:III, dead, 195 days
11516.5
DO46513
54 years, female, NA, stage:IV, dead, 1883 days
11143.7
DO46458
67 years, female, NA, stage:IV, alive, 3787 days
10667.6
DO46378
59 years, female, NA, stage:III, alive, 843 days
10554.0
DO46528
56 years, female, NA, stage:III, alive, 6139 days
10420.2
DO46336
70 years, female, NA, stage:IV, dead, 664 days
10135.7
DO46493
62 years, female, NA, stage:IV, alive, 839 days
9918.6
DO46606
73 years, female, NA, stage:III, alive, 804 days
9821.1
DO46538
57 years, female, NA, stage:III, dead, 1527 days
9639.6
DO46468
67 years, female, NA, stage:III, alive, 2776 days
9112.6
DO46586
55 years, female, NA, stage:III, dead, 1019 days
8728.3
DO46348
58 years, female, NA, stage:IV, dead, 287 days
8607.4
DO46340
62 years, female, NA, stage:III, dead, 616 days
8547.2
DO46372
39 years, female, NA, stage:III, dead, 1326 days
8473.5
DO46398
66 years, female, NA, stage:III, alive, 437 days
8405.7
DO46332
56 years, female, NA, stage:III, dead, 689 days
8310.8
DO46551
58 years, female, NA, stage:III, dead, 1055 days
7716.4
DO46588
74 years, female, NA, stage:III, dead, 438 days
7612.4
DO46360
58 years, female, NA, stage:IV, dead, 1759 days
7591.9
DO46602
74 years, female, NA, stage:III, dead, 205 days
7483.3
DO46328
52 years, female, NA, stage:III, dead, 972 days
7480.4
DO46342
67 years, female, NA, stage:III, dead, 1398 days
7476.1
DO46533
46 years, female, NA, stage:III, alive, 3667 days
7467.5
DO46386
49 years, female, NA, stage:III, dead, 1162 days
7414.8
DO46597
60 years, female, NA, stage:III, dead, 393 days
7353.3
DO46571
61 years, female, NA, stage:III, dead, 243 days
7352.2
DO46362
61 years, female, NA, stage:III, dead, 1639 days
7316.6
DO46384
55 years, female, NA, stage:III, dead, 614 days
7286.5
DO46396
64 years, female, NA, stage:III, dead, 583 days
7270.2
DO46370
54 years, female, NA, stage:III, dead, 1727 days
6928.8
DO46364
45 years, female, NA, stage:III, dead, 806 days
6881.2
DO46344
46 years, female, NA, stage:III, dead, 642 days
6733.1
DO46354
73 years, female, NA, stage:III, dead, 843 days
6624.6
DO46560
45 years, female, NA, stage:IV, dead, 286 days
6605.2
DO46334
77 years, female, NA, stage:III, dead, 496 days
6556.1
DO46358
60 years, female, NA, stage:III, dead, 423 days
6529.6
DO46568
66 years, female, NA, stage:III, dead, 320 days
6495.5
DO46523
52 years, female, NA, stage:IV, alive, 1873 days
6120.6
DO46330
60 years, female, NA, stage:III, dead, 684 days
6094.5
DO46443
59 years, female, NA, stage:III, dead, 2464 days
5739.6
DO46327
54 years, female, NA, stage:III, dead, 184 days
5680.4
DO46346
54 years, female, NA, stage:III, dead, 1187 days
5530.4
DO46392
48 years, female, NA, stage:III, dead, 628 days
5522.6
DO46463
49 years, female, NA, stage:III, dead, 2451 days
5471.8
DO46325
54 years, female, NA, stage:III, dead, 477 days
5461.0
DO46448
45 years, female, NA, stage:III, dead, 654 days
5297.7
DO46508
50 years, female, NA, stage:III, dead, 2101 days
5262.0
DO46326
51 years, female, NA, stage:III, dead, 701 days
5230.0
DO46611
52 years, female, NA, stage:III, dead, 734 days
5227.0
DO46390
65 years, female, NA, stage:III, dead, 374 days
5009.2
DO46376
58 years, female, NA, stage:III, dead, 1430 days
4970.4
DO46436
58 years, female, NA, stage:III, alive, 3193 days
4880.7
DO46350
66 years, female, NA, stage:III, dead, 886 days
4783.0
DO46368
57 years, female, NA, stage:III, dead, 2879 days
4757.4
DO46374
69 years, female, NA, stage:III, dead, 1409 days
4676.8
DO46338
59 years, female, NA, stage:III, dead, 596 days
3933.4
DO46394
61 years, female, NA, stage:IV, dead, 1039 days
3745.1
DO46366
65 years, female, NA, stage:III, dead, 2054 days
3656.0
DO46402
77 years, female, NA, stage:III, dead, 511 days
3423.1
DO46388
74 years, female, NA, stage:III, dead, 413 days
3339.5
DO46581
66 years, female, NA, stage:III, dead, 408 days
3333.2
DO46352
60 years, female, NA, stage:III, dead, 677 days
3324.0
DO46432
56 years, female, NA, stage:III, alive, 2218 days
3002.0
DO46412
64 years, female, NA, stage:III, dead, 597 days
2970.0
DO46333
58 years, female, NA, stage:III, dead, 359 days
2955.2
DO46576
75 years, female, NA, stage:III, alive, 133 days
2165.3
DO46380
51 years, female, NA, stage:III, dead, 1423 days
2041.1
DO46591
58 years, female, NA, stage:III, dead, 195 days
1674.9
DO46453
66 years, female, NA, stage:III, dead, 3294 days
1666.2
DO46356
68 years, female, NA, stage:III, dead, 911 days
1650.6
Show allShow less
OVARY SEROUS CYSTADENOCARCINOMA - Protein relative expression (CPTAC)
Number of samples
108
Samples
Sample ID
Sample type
nRPX
e3ebe010-cd31-4b5d-8fcb-b7103b_D2
Tumor
N/A
1556af7e-c2ae-4fce-9aae-87c459_D1_D2
Normal
N/A
21efd60f-6a31-4b98-9477-16a905_D2
Normal
N/A
b22659b9-e12c-4725-a7db-a833de_D1_D2
Normal
N/A
3946a96c-e0ae-442f-83b4-a9350e_D2
Tumor
N/A
285fed94-1495-448e-879b-b55de9_D2
Tumor
N/A
d109a3c0-350e-47f5-bda0-61899c_D2
Tumor
N/A
a583d3ff-8165-43e9-b764-23b7ef_D1_D2
Normal
N/A
9a7a86d3-bbf2-4d36-941d-c75c03_D1_D2
Tumor
N/A
6e209757-a7f4-45af-b5f3-2ebc02_D2
Normal
N/A
8ed739dd-ae0f-4881-971a-db3cf4_D1_D2
Normal
N/A
ce1e5dfc-2ef1-4633-af93-5ea4d9_D2
Tumor
N/A
91b287fd-eadb-442d-abcd-20b741_D2
Tumor
N/A
a8853382-b726-4ce8-98d5-ca89df_D2
Tumor
N/A
eb3f3494-7057-4afe-b212-e6e9a3_D2
Tumor
N/A
2f901c90-617e-46da-9fac-d68369_D2
Tumor
N/A
41d0619e-b299-42e2-ac32-29e784_D2
Tumor
N/A
efc971f8-54c5-4531-a792-705ecf_D2
Tumor
N/A
1de8d3d8-fc0e-4be0-8aa7-127c7b_D2
Tumor
N/A
05387aad-2a1f-42c2-8d6f-950598_D3
Tumor
N/A
558333b0-ea23-4303-9e3c-4932b1_D2
Tumor
N/A
d38f40fb-dd78-43b2-8b7b-4b6977_D2
Tumor
N/A
1c9145ad-1981-4871-aa7e-8b11de_D2
Tumor
N/A
318d53c3-216b-4de1-a098-77d6dd_D2
Tumor
N/A
3a380577-c134-47ba-a1ce-988d7c_D2
Tumor
N/A
7d953d1d-84b6-4ecd-b1d7-1ed865_D2
Tumor
N/A
256ac9f5-1e19-44b4-92fb-fef3fc_D2
Tumor
N/A
46c73531-f531-4ec3-97fe-b39d9d_D2
Tumor
N/A
a03d1103-b809-42c4-ad5c-5aff58_D2
Tumor
N/A
6530147a-efe9-4df6-ac2f-03ece3_D2
Tumor
N/A
0745488e-0bfb-4d1f-8228-dedf76_D1_D2
Normal
N/A
e23eb014-69c1-460a-b9d4-9786c8_D2
Normal
N/A
7069e990-4a4e-4984-a66d-4d835a_D2
Tumor
N/A
627e6e36-3dca-4ee5-9755-6f3510_D2
Tumor
N/A
3e746bea-ed68-40e6-b348-6ddf08_D2
Normal
N/A
1772e913-f62e-446a-8cf3-720348_D2
Tumor
N/A
e9d416e7-f661-400a-896e-388545_D2
Tumor
N/A
e6850782-fd2a-4c53-b682-1852fe_D2
Tumor
N/A
79b60f32-6cca-4cb6-9a1e-22a3ac_D2
Tumor
N/A
3dcf8b3c-c0c5-4dfa-9543-5d30fb_D2
Tumor
N/A
8e17b45e-6a06-4e4e-913d-7b1edb_D2
Tumor
N/A
f6c215ea-5381-4521-bb61-be8e97_D2
Tumor
N/A
2ed8beb2-bc63-4bad-b5fe-1916a0_D2
Tumor
N/A
2563cb02-d58a-4286-8634-7502cd_D2
Tumor
N/A
50997c44-1c8b-4d34-b535-4a6cc2_D2
Tumor
N/A
42d860a3-8a0c-4c44-a09a-9ad8cf_D2
Tumor
N/A
2dc28da8-7ff1-4b9b-b5bd-17cc25_D2
Tumor
N/A
1abbcb28-f221-4cd4-8c01-37b9bb_D1_D2
Normal
N/A
69d552be-7cb2-4bb4-b602-a27b3e_D2
Tumor
N/A
51a4ce2f-4166-4c6b-a7e0-942d0a_D2
Tumor
N/A
10c2d629-0287-4511-ac25-f29031_D2
Tumor
N/A
2224c03f-b7b1-4368-887e-2b4cdf_D2
Tumor
N/A
2b73e01c-347a-4dae-a71d-752aeb_D2
Normal
N/A
76e77c6b-c80e-4391-bdbb-e1dcea_D2
Tumor
N/A
e7b656bf-3c34-4ba1-bdf3-c7eefe_D2
Tumor
N/A
eb0a53df-7620-4024-8d2d-051142_D2
Tumor
N/A
80873a0c-1f40-4d51-bab1-3f2071_D2
Tumor
N/A
340a3769-3031-41ae-bb08-a2f696_D2
Normal
N/A
2433b136-fc7b-4cea-b958-bc6efb_D2
Tumor
N/A
994f9b8e-46cb-413f-8ec8-2c2fed_D2
Normal
N/A
2115808b-6a0d-49bc-a8d7-b83bde_D2
Tumor
N/A
5ea22f5e-307b-491d-801f-8b7fa6_D2
Tumor
N/A
af95e2c6-25c4-4ab8-bf06-3e15ff_D2
Tumor
N/A
49bd51fe-48a1-4828-b66e-b30c38_D2
Tumor
N/A
08296da7-70ea-44df-8646-09f2cc_D2
Tumor
N/A
31c15e30-21d4-4843-bd4a-9cd0d8_D2
Normal
N/A
685ec3c2-e67a-40d3-9eb3-aa01c9_D1_D2
Normal
N/A
51c1c79e-5a8e-4b0a-bf92-1c0cab_D2
Tumor
N/A
3fbf076a-824b-4eac-b6dc-bf5e59_D2
Normal
N/A
1b2ab076-c72f-4bbe-b9f9-657d24_D2
Tumor
N/A
2b4ce90c-8036-4207-ac3e-54a76f_D2
Tumor
N/A
c17b0ff9-9057-4848-a0cc-abb25f_D2
Tumor
N/A
52c064a7-78d9-4a1a-85b4-27c6d1_D2
Tumor
N/A
15524912-685a-47ce-a824-567848_D2
Tumor
N/A
bd266bdd-12e4-42cb-9c49-911bfc_D2
Tumor
N/A
927f0958-db5a-4bc5-92b7-2a3695_D2
Tumor
N/A
d4791079-c826-4fc7-9d9b-ee20ba_D2
Tumor
N/A
35a345a4-e954-4c81-ae3f-7797cd_D2
Tumor
N/A
0cc794c3-5bf5-4621-b238-58a0f6_D2
Tumor
N/A
3490835c-c004-45ed-91f3-7c206f_D2
Tumor
N/A
a3a26070-fb84-406a-8280-d555e6_D2
Normal
N/A
161317f3-1a39-438e-af45-cd2502_D2
Tumor
N/A
fe83e13f-9754-403b-8f74-d6caf8_D2
Tumor
N/A
1db5574d-aca7-403c-8100-6e705f_D2
Normal
N/A
4ccb249a-6722-491e-97e9-e3b4e7_D2
Tumor
N/A
9b90eb78-2f50-4aeb-b010-d642f9_D2
Tumor
N/A
b9c1f22e-61f7-45ed-b3b4-5094c7_D2
Normal
N/A
8d78194e-fbef-4819-a7b5-b73ae9_D2
Tumor
N/A
7edfd606-4bee-4529-9fec-1ca7f0_D2
Normal
N/A
3d3e1888-d67e-4c69-ba83-112d0f_D2
Tumor
N/A
28d0abdb-f682-4bd3-9425-a9c508_D2
Tumor
N/A
61f76fe6-a1c6-41b8-bdc2-2f9209_D2
Normal
N/A
6319b36b-533c-4e86-8e12-80552e_D3
Tumor
N/A
0c87932d-b6fd-4eb5-b86a-a34d07_D2
Tumor
N/A
7c7ce2d7-6c8a-424e-8e6c-d14ad1_D2
Tumor
N/A
092af714-b97a-457c-b0e9-8c20e8_D2
Normal
N/A
62f5840e-6cd7-4200-b651-645e53_D2
Tumor
N/A
74a45e5a-a35a-4c60-a4b4-f3f5ea_D2
Tumor
N/A
347e379b-77c0-4dd3-aa25-18c9d1_D2
Tumor
N/A
5c3971ee-87c7-4dff-b66e-f18892_D2
Tumor
N/A
cfd76f9a-ce60-4ec7-8e6b-a8fc31_D3
Tumor
N/A
27f3ca2d-a86f-479d-8e7e-5307c7_D2
Tumor
N/A
a65d8e76-640f-4341-a561-afbb57_D2
Normal
N/A
fbb41c94-aabd-49cc-90b2-882c3e_D2
Tumor
N/A
1a10c200-3895-4648-b951-94f99f_D2
Tumor
N/A
9e0d47e0-f633-468b-b82b-4d752d_D2
Tumor
N/A
8234f8ea-bdbd-45b0-bd0b-16f1e7_D2
Tumor
N/A
9c8e78bf-b03e-4ba0-9909-5ff070_D2
Tumor
N/A
Show allShow less
OVARIAN CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
