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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:171.3 nTPM
HPA Brain:81.7 nTPM
GTEx:171.3 nTPM
FANTOM5:273.5 Scaled Tags Per Million
Mouse:110.5 nTPM
Allen mouse:0.4 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055972Antibody HPA055973Antibody CAB040547
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedHigh



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

81.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 81.7
1857 Female, age 85, left hemisphere 122.3
1854 Male, age 80, left hemisphere 98.8
2290 Female, age 72, unknown 85.2
2289 Male, age 61, right hemisphere 80.3
2481 Female, age 94, left hemisphere 75.6
2846 Female, age 79, unknown 70.7
1781 Male, age 74, unknown 60.6
2288 Male, age 75, left hemisphere 60.5
Globus pallidus, externus
nTPM: 44.2
2646 Male, age 61, right hemisphere 62.7
1996 Male, age 80, right hemisphere 48.8
2395 Male, age 75, both hemispheres 39.7
2567 Female, age 72, unknown 35.0
2772 Female, age 79, unknown 34.8
Globus pallidus, internus
nTPM: 39.4
2483 Female, age 94, right hemisphere 56.5
2037 Male, age 80, right hemisphere 48.0
2287 Male, age 75, right hemisphere 43.5
1818 Male, age 74, unknown 39.4
2566 Female, age 72, unknown 31.9
2778 Female, age 91, both hemispheres 30.3
2111 Female, age 85, right hemisphere 26.1
Nucleus accumbens
nTPM: 75.8
1806 Female, age 85, left hemisphere 112.3
1783 Male, age 74, unknown 90.2
1856 Female, age 91, right hemisphere 83.4
2824 Male, age 61, right hemisphere 80.8
2698 Female, age 72, unknown 73.8
2286 Male, age 75, left hemisphere 64.9
2732 Male, age 80, right hemisphere 59.5
2391 Female, age 94, left hemisphere 41.1
Nucleus basalis of Meynert
nTPM: 58.6
2393 Male, age 80, right hemisphere 71.9
2569 Male, age 61, both hemispheres 66.7
2484 Female, age 94, left hemisphere 50.4
2821 Male, age 75, both hemispheres 45.2
Nucleus of the diagonal band
nTPM: 49.4
1979 Male, age 74, unknown 66.3
2195 Female, age 85, both hemispheres 53.3
2775 Male, age 80, right hemisphere 47.5
1812 Female, age 91, both hemispheres 45.0
2029 Male, age 61, right hemisphere 35.0
Putamen
nTPM: 68.5
1838 Male, age 80, right hemisphere 114.7
1829 Male, age 74, unknown 73.9
1937 Female, age 91, right hemisphere 70.1
2466 Female, age 79, unknown 61.7
2482 Female, age 94, left hemisphere 55.1
2489 Female, age 72, unknown 52.7
2647 Male, age 75, left hemisphere 51.4
Septal nuclei
nTPM: 47.2
2199 Male, age 80, right hemisphere 62.9
2059 Female, age 85, both hemispheres 59.7
1960 Male, age 74, unknown 46.5
2394 Male, age 61, left hemisphere 44.2
2009 Female, age 91, both hemispheres 43.7
2629 Female, age 94, right hemisphere 39.9
2031 Female, age 72, unknown 33.4
Stria terminalis, bed nucleus
nTPM: 38.5
2201 Male, age 74, unknown 40.7
1974 Female, age 91, both hemispheres 39.9
2486 Female, age 94, both hemispheres 35.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

171.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 149.8
Samples: 246

Max nTPM: 306.9
Min nTPM: 30.8
Std nTPM: 35.0
Median nTPM: 148.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 306.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 252.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 243.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 242.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 234.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 232.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 230.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 228.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 228.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 223.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 222.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 211.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 211.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 208.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 205.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 205.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 201.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 201.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 200.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 199.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 199.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 197.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 194.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 193.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 192.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 191.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 190.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 190.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 189.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 188.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 188.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 188.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 185.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 185.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 184.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 183.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 183.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 183.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 182.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 182.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 182.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 182.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 181.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 181.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 181.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 180.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 180.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 180.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 179.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 178.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 176.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 175.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 175.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 173.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 172.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 172.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 171.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 171.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 170.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 168.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 166.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 166.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 166.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 166.2
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 166.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 164.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 163.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 162.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 162.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 162.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 162.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 162.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 162.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 161.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 161.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 161.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 161.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 161.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 160.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 160.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 159.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 159.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 159.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 159.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 159.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 159.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 158.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 158.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 158.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 158.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 157.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 156.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 156.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 156.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 155.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 155.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 155.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 155.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 155.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 154.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 154.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 154.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 154.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 154.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 153.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 153.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 152.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 152.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 152.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 152.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 152.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 151.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 151.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 150.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 149.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 149.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 149.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 148.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 148.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 148.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 148.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 148.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 148.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 148.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 147.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 147.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 147.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 147.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 147.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 146.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 146.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 146.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 145.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 143.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 143.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 142.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 141.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 141.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 141.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 140.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 140.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 140.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 140.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 140.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 140.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 140.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 140.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 139.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 138.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 137.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 137.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 137.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 137.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 136.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 136.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 136.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 135.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 135.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 135.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 135.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 134.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 133.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 133.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 132.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 131.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 131.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 131.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 131.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 130.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 130.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 130.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 130.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 129.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 128.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 128.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 128.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 128.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 128.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 127.4
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 126.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 126.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 126.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 126.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 125.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 125.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 125.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 125.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 124.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 124.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 124.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 124.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 124.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 123.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 123.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 122.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 122.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 122.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 121.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 120.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 120.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 120.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 120.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 119.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 119.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 119.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 118.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 117.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 117.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 117.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 117.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 116.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 115.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 115.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 115.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 114.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 114.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 113.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 111.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 111.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 110.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 110.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 109.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 108.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 108.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 107.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 107.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 107.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 106.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 106.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 105.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 105.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 104.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 104.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 103.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 100.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 99.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 98.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 95.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 92.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 92.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 91.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 84.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 80.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 76.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 75.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 30.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 171.3
Samples: 246

Max nTPM: 316.0
Min nTPM: 22.2
Std nTPM: 45.0
Median nTPM: 170.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 316.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 298.2
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 286.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 266.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 265.0
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 264.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 261.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 257.3
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 253.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 251.5
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 251.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 248.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 245.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 243.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 240.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 238.8
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 237.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 237.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 234.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 233.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 232.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 230.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 230.0
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 228.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 228.0
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 227.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 227.0
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 226.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 225.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 224.7
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 223.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 222.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 221.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 221.0
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 218.2
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 217.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 217.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 215.2
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 215.0
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 214.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 213.8
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 212.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 211.1
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 211.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 210.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 210.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 208.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 207.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 207.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 207.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 205.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 204.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 204.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 203.3
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 203.0
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 202.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 202.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 201.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 201.1
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 200.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 199.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 199.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 198.0
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 196.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 195.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 194.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 194.4
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 193.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 192.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 192.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 192.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 191.7
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 191.4
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 191.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 190.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 190.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 189.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 189.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 189.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 189.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 188.3
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 186.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 186.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 185.5
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 185.4
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 184.7
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 184.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 183.1
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 182.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 182.1
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 181.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 181.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 181.6
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 181.5
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 181.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 180.6
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 180.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 180.1
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 179.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 179.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 179.4
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 178.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 178.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 177.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 177.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 176.8
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 176.5
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 176.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 176.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 175.9
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 175.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 175.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 174.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 174.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 174.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 174.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 173.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 173.3
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 173.0
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 172.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 172.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 171.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 171.1
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 170.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 169.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 168.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 168.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 168.3
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 168.1
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 167.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 167.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 167.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 167.0
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 166.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 166.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 164.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 164.0
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 164.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 163.9
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 163.8
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 163.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 163.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 163.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 163.2
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 162.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 162.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 162.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 162.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 161.9
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 161.7
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 161.6
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 161.5
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 161.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 161.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 160.8
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 159.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 159.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 159.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 159.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 159.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 158.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 158.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 157.6
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 157.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 156.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 156.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 155.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 154.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 154.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 154.3
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 153.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 152.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 152.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 152.0
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 151.9
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 151.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 151.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 151.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 151.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 151.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 150.7
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 150.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 150.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 149.7
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 147.5
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 147.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 145.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 144.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 142.8
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 142.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 142.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 141.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 140.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 140.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 140.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 138.5
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 137.4
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 136.8
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 136.6
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 136.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 135.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 134.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 134.4
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 134.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 133.7
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 132.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 131.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 129.4
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 129.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 125.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 125.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 124.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 123.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 122.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 122.4
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 122.2
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 121.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 120.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 120.6
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 120.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 119.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 116.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 115.0
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 112.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 108.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 107.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 107.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 106.1
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 105.8
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 103.5
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 103.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 98.4
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 95.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 85.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 84.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 80.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 78.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 77.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 75.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 74.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 72.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 72.3
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 69.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 66.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 60.5
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 22.2
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Brain - Putamen (basal ganglia)
Average nTPM: 146.2
Samples: 205

Max nTPM: 278.8
Min nTPM: 66.4
Std nTPM: 37.4
Median nTPM: 141.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 278.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 251.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 249.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 246.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 234.3
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 228.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 228.2
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 228.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 227.2
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 215.2
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 213.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 209.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 207.7
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 206.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 203.7
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 201.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 200.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 200.3
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 198.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 197.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 195.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 191.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 191.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 191.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 190.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 190.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 190.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 188.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 187.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 187.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 187.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 185.5
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 183.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 183.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 182.8
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 182.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 180.9
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 179.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 176.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 175.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 175.0
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 174.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 173.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 173.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 172.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 172.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 169.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 169.7
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 168.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 168.5
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 168.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 168.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 164.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 163.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 163.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 163.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 163.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 162.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 161.9
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 161.3
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 160.8
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 160.7
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 160.2
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 160.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 159.4
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 159.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 158.0
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 156.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 154.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 154.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 154.7
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 154.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 154.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 154.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 153.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 153.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 153.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 153.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 152.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 152.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 151.4
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 150.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 150.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 150.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 149.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 149.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 149.4
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 149.1
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 148.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 148.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 147.4
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 146.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 146.6
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 146.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 144.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 144.9
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 144.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 142.5
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 142.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 141.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 141.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 141.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 141.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 141.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 140.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 140.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 140.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 140.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 140.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 139.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 139.1
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 138.7
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 138.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 138.4
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 138.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 138.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 137.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 136.6
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 136.5
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 136.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 136.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 136.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 136.1
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 136.1
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 135.7
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 135.2
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 135.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 133.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 133.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 133.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 133.2
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 132.7
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 132.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 131.6
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 131.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 130.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 130.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 129.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 128.8
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 128.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 128.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 127.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 127.4
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 126.7
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 125.3
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 124.2
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 123.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 122.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 121.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 121.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 121.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 121.0
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 120.6
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 119.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 119.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 119.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 118.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 116.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 116.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 116.4
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 116.1
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 115.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 115.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 115.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 115.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 115.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 114.7
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 114.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 114.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 113.9
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 113.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 112.4
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 111.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 110.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 109.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 109.0
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 108.5
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 108.4
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 107.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 107.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 106.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 105.5
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 104.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 103.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 102.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 102.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 101.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 100.2
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 98.6
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 98.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 97.4
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 96.8
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 92.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 92.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 89.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 88.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 87.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 86.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 85.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 75.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 74.3
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 72.5
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 72.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 68.7
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 66.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

273.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 246.2
FF:10164-103B2 76 years, female 246.2
Nucleus accumbens
Scaled Tags Per Million: 175.1
FF:10037-101F1 23-56 years, mixed 175.1
Putamen
Scaled Tags Per Million: 273.5
FF:10176-103C5 60 years, female 273.5
Globus pallidus
Scaled Tags Per Million: 124.0
FF:10175-103C4 60 years, female 129.4
FF:10161-103A8 76 years, female 118.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.5
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 44.8
Samples: 4

Max nTPM: 52.2
Min nTPM: 37.8
Sample A Male 47.3
Sample B Male 41.9
Sample C Female 52.2
Sample D Female 37.8
Septum
nTPM: 110.5
Samples: 4

Max nTPM: 133.3
Min nTPM: 78.9
Sample A Male 78.9
Sample B Male 115.9
Sample C Female 133.3
Sample D Female 113.9
Ventral forebrain
nTPM: 38.5
Samples: 4

Max nTPM: 52.4
Min nTPM: 31.4
Sample A Male 34.0
Sample B Male 31.4
Sample C Female 52.4
Sample D Female 36.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.4
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.4
71656927 Antisense, RP_050927_04_E09, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.4
71656927 Antisense, RP_050927_04_E09, Mouse strain C57BL/6J (56 days, male) 0.4

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