HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:234.8 nTPM
HPA Brain:84.3 nTPM
GTEx:234.8 nTPM
FANTOM5:391.1 Scaled Tags Per Million
Pig:252.3 nTPM
Mouse:562.9 nTPM
Allen mouse:26.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA068667Antibody CAB004616
Glial cells Not detectedLow
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 84.3
Sample id Sample description nTPM
Hippocampus
nTPM: 66.9
1898 Male, age 80, left hemisphere 114.3
1855 Male, age 76, left hemisphere 92.2
2621 Female, age 67, right hemisphere 67.9
2148 Female, age 91, left hemisphere 61.6
1911 Female, age 85, right hemisphere 42.0
2529 Female, age 94, left hemisphere 23.2
Dentate gyrus
nTPM: 59.4
1927 Female, age 91, both hemispheres 82.1
2010 Male, age 76, both hemispheres 66.4
2246 Female, age 85, both hemispheres 65.5
2528 Male, age 74, both hemispheres 54.0
2530 Female, age 94, left hemisphere 51.7
2531 Female, age 67, both hemispheres 36.9
Entorhinal gyrus
nTPM: 53.8
1938 Female, age 85, left hemisphere 74.8
2764 Male, age 80, right hemisphere 65.0
1787 Male, age 76, left hemisphere 59.2
2686 Male, age 75, right hemisphere 52.6
2613 Female, age 94, left hemisphere 36.1
2117 Female, age 91, right hemisphere 35.2
Hippocampus, CA1
nTPM: 72.7
2749 Male, age 80, left hemisphere 124.1
1873 Female, age 85, both hemispheres 74.1
2045 Male, age 76, both hemispheres 68.6
2527 Male, age 74, both hemispheres 62.4
2082 Female, age 91, right hemisphere 34.5
Hippocampus, CA2
nTPM: 68.6
1892 Male, age 76, both hemispheres 108.8
1963 Male, age 80, left hemisphere 80.7
2113 Female, age 91, right hemisphere 61.5
2249 Male, age 74, both hemispheres 60.6
1940 Female, age 85, left hemisphere 58.2
2437 Female, age 94, left hemisphere 41.7
Hippocampus, CA3
nTPM: 57.3
2137 Male, age 80, left hemisphere 96.7
1867 Male, age 76, both hemispheres 75.2
1891 Female, age 85, both hemispheres 58.8
2861 Female, age 67, both hemispheres 41.6
2620 Female, age 94, left hemisphere 38.8
2436 Male, age 74, both hemispheres 32.7
Parahippocampal cortex
nTPM: 71.8
1850 Male, age 80, both hemispheres 94.0
2250 Female, age 67, right hemisphere 89.0
2532 Female, age 72, left hemisphere 76.7
2245 Female, age 91, both hemispheres 75.2
1933 Female, age 85, both hemispheres 74.6
1990 Female, age 91, right hemisphere 74.2
2693 Female, age 94, both hemispheres 69.3
2018 Male, age 76, both hemispheres 59.8
2692 Male, age 74, both hemispheres 59.5
2622 Female, age 67, right hemisphere 45.3
Perirhinal gyrus
nTPM: 84.3
1794 Male, age 80, right hemisphere 91.7
2848 Male, age 76, right hemisphere 84.5
1847 Female, age 91, left hemisphere 83.5
1841 Female, age 85, right hemisphere 81.6
2521 Female, age 94, right hemisphere 80.3
Subiculum
nTPM: 41.8
2729 Female, age 91, right hemisphere 65.9
1901 Male, age 80, both hemispheres 65.3
1977 Female, age 85, both hemispheres 47.0
2042 Male, age 76, both hemispheres 37.6
2619 Male, age 74, both hemispheres 25.7
2438 Female, age 94, left hemisphere 9.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 234.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 234.8
Samples: 197

Max nTPM: 574.2
Min nTPM: 32.0
Std nTPM: 111.4
Median nTPM: 236.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 574.2
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 500.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 457.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 453.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 444.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 443.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 433.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 431.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 424.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 420.3
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 416.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 391.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 391.1
FF:10169-103B7 60 years, female 490.2
FF:10153-102I9 76 years, female 292.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 252.3
Pig sample Sample description nTPM
Subiculum
nTPM: 179.9
Samples: 4

Max nTPM: 228.0
Min nTPM: 156.5
Sample A Female 228.0
Sample B Female 162.6
Sample C Male 172.5
Sample D Male 156.5
Dorsal hippocampus
nTPM: 252.3
Samples: 4

Max nTPM: 322.9
Min nTPM: 207.5
Sample A Female 322.9
Sample B Female 255.4
Sample C Male 223.4
Sample D Male 207.5
Entorhinal cortex
nTPM: 170.0
Samples: 4

Max nTPM: 199.7
Min nTPM: 159.0
Sample A Female 199.7
Sample B Female 161.6
Sample C Male 159.0
Sample D Male 159.6
Ventral hippocampus
nTPM: 220.2
Samples: 4

Max nTPM: 247.1
Min nTPM: 145.6
Sample A Female 247.1
Sample B Female 145.6
Sample C Male 245.3
Sample D Male 242.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 562.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 516.8
Samples: 4

Max nTPM: 531.8
Min nTPM: 487.0
Sample A Male 487.0
Sample B Male 530.9
Sample C Female 517.5
Sample D Female 531.8
Hippocampal formation
nTPM: 562.9
Samples: 4

Max nTPM: 601.6
Min nTPM: 523.0
Sample A Male 601.6
Sample B Male 558.9
Sample C Female 568.1
Sample D Female 523.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 26.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 26.8
583575 Antisense, RP_040831_02_G07, Mouse strain C57BL/6J (56 days, male) 26.8

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