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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
124.9
nTPM
GTEx:
124.9
nTPM
FANTOM5:
133.4
Scaled Tags Per Million
Mouse:
167.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
124.9
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 124.9
Samples: 105
Max nTPM: 173.0
Min nTPM: 87.8
Std nTPM: 17.5
Median nTPM:
153_1
70 years, female
173.0
308_1
70 years, female
171.6
2_1
77 years, female
161.5
246_1
77 years, male
157.4
35_1
74 years, female
157.3
414_1
84 years, female
156.8
142_1
61 years, female
155.4
189_1
76 years, male
153.3
384_1
83 years, male
150.5
377_1
82 years, female
149.7
126_1
63 years, male
148.0
17_1
71 years, male
147.7
394_1
75 years, female
143.8
315_1
62 years, female
142.0
265_1
87 years, male
141.8
389_1
86 years, female
141.7
322_1
76 years, male
141.3
405_1
91 years, male
140.6
415_1
77 years, female
139.4
425_1
59 years, female
139.2
139_1
64 years, female
138.9
313_1
79 years, female
138.9
115_1
83 years, male
138.8
526_1
61 years, male
137.1
120_1
70 years, female
136.8
18_1
88 years, male
136.1
321_1
62 years, female
135.6
319_1
81 years, male
135.4
495_1
57 years, female
135.3
109_1
81 years, female
134.4
466_1
57 years, female
133.7
162_1
79 years, female
133.4
229_1
69 years, female
133.0
266_1
85 years, male
131.9
396_1
62 years, male
130.9
499_1
55 years, female
130.3
517_1
88 years, male
130.3
254_1
77 years, female
129.8
163_1
78 years, male
129.5
311_1
78 years, male
128.9
376_1
75 years, female
128.2
177_1
74 years, male
127.4
217_1
76 years, male
127.3
375_1
74 years, female
127.2
468_1
89 years, male
127.1
501_1
88 years, male
127.1
452_1
88 years, female
126.7
81_1
67 years, male
126.3
447_1
81 years, male
126.3
6_1
73 years, female
126.1
404_1
82 years, female
125.7
379_1
60 years, male
125.3
518_1
75 years, female
125.3
386_1
76 years, male
125.2
286_1
68 years, female
124.8
355_1
70 years, female
124.2
503_1
68 years, male
124.1
172_1
72 years, female
123.9
406_1
79 years, male
123.6
4_1
88 years, female
123.3
89_1
63 years, male
123.2
307_1
66 years, female
121.2
145_1
84 years, male
121.1
324_1
76 years, male
119.9
320_1
89 years, female
119.8
32_1
67 years, male
119.4
42_1
85 years, male
119.4
335_1
73 years, female
119.0
243_1
75 years, male
118.9
9_1
66 years, female
118.5
251_1
78 years, male
118.5
119_1
70 years, female
118.2
352_1
62 years, male
117.0
288_1
66 years, female
115.9
354_1
81 years, female
114.7
264_1
73 years, female
114.1
316_1
62 years, male
114.0
149_1
88 years, male
113.5
41_1
94 years, female
111.8
293_1
68 years, female
111.7
349_1
83 years, male
111.7
347_1
72 years, male
110.4
99_1
64 years, male
110.2
348_1
84 years, male
108.9
506_1
65 years, male
108.1
480_1
63 years, male
107.6
117_1
61 years, male
107.2
218_1
71 years, female
106.3
318_1
68 years, male
106.2
137_1
83 years, male
105.7
351_1
91 years, male
105.5
491_1
89 years, female
105.5
292_1
71 years, male
104.8
413_1
59 years, female
103.3
173_1
67 years, male
100.9
237_1
82 years, male
100.3
295_1
61 years, female
100.3
350_1
84 years, female
98.3
353_1
82 years, female
97.9
317_1
60 years, male
96.4
356_1
87 years, female
95.6
490_1
67 years, female
92.2
314_1
67 years, male
91.9
43_1
64 years, female
91.3
291_1
76 years, male
87.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
The Human Protein Atlas project is funded
