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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:401.2 nTPM
HPA Brain:226.0 nTPM
GTEx:401.2 nTPM
FANTOM5:543.6 Scaled Tags Per Million
Pig:247.0 nTPM
Mouse:462.9 nTPM
Allen mouse:6.3 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044708
Glial cells Not detected
Neuronal cells High

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

226.0
Sample id Sample description nTPM
Caudate nucleus
nTPM: 215.2
2846 Female, age 79, unknown 246.8
2481 Female, age 94, left hemisphere 238.7
1854 Male, age 80, left hemisphere 232.2
1857 Female, age 85, left hemisphere 232.0
2288 Male, age 75, left hemisphere 205.3
1781 Male, age 74, unknown 203.9
2290 Female, age 72, unknown 198.0
2289 Male, age 61, right hemisphere 164.9
Globus pallidus, externus
nTPM: 177.9
2772 Female, age 79, unknown 224.3
2395 Male, age 75, both hemispheres 200.2
1996 Male, age 80, right hemisphere 196.4
2646 Male, age 61, right hemisphere 162.7
2567 Female, age 72, unknown 106.0
Globus pallidus, internus
nTPM: 174.4
2483 Female, age 94, right hemisphere 210.1
2287 Male, age 75, right hemisphere 201.4
2037 Male, age 80, right hemisphere 195.2
1818 Male, age 74, unknown 181.0
2778 Female, age 91, both hemispheres 164.8
2566 Female, age 72, unknown 147.8
2111 Female, age 85, right hemisphere 120.6
Nucleus accumbens
nTPM: 211.4
1856 Female, age 91, right hemisphere 271.8
2698 Female, age 72, unknown 246.4
1806 Female, age 85, left hemisphere 222.9
2286 Male, age 75, left hemisphere 213.8
1783 Male, age 74, unknown 212.9
2391 Female, age 94, left hemisphere 191.4
2824 Male, age 61, right hemisphere 187.8
2732 Male, age 80, right hemisphere 144.2
Nucleus basalis of Meynert
nTPM: 191.6
2821 Male, age 75, both hemispheres 216.6
2484 Female, age 94, left hemisphere 193.4
2393 Male, age 80, right hemisphere 179.8
2569 Male, age 61, both hemispheres 176.7
Nucleus of the diagonal band
nTPM: 226.0
1812 Female, age 91, both hemispheres 272.0
2775 Male, age 80, right hemisphere 258.6
2195 Female, age 85, both hemispheres 231.6
2029 Male, age 61, right hemisphere 196.8
1979 Male, age 74, unknown 170.9
Putamen
nTPM: 198.9
1838 Male, age 80, right hemisphere 241.4
2482 Female, age 94, left hemisphere 229.2
1937 Female, age 91, right hemisphere 221.4
2466 Female, age 79, unknown 200.2
1829 Male, age 74, unknown 191.7
2647 Male, age 75, left hemisphere 168.1
2489 Female, age 72, unknown 140.0
Septal nuclei
nTPM: 194.4
1960 Male, age 74, unknown 248.1
2031 Female, age 72, unknown 243.4
2009 Female, age 91, both hemispheres 204.8
2629 Female, age 94, right hemisphere 201.2
2199 Male, age 80, right hemisphere 159.3
2394 Male, age 61, left hemisphere 154.0
2059 Female, age 85, both hemispheres 150.0
Stria terminalis, bed nucleus
nTPM: 186.0
1974 Female, age 91, both hemispheres 232.4
2201 Male, age 74, unknown 182.3
2486 Female, age 94, both hemispheres 143.2

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

401.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 345.7
Samples: 246

Max nTPM: 610.4
Min nTPM: 173.5
Std nTPM: 72.4
Median nTPM: 340.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 610.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 579.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 557.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 541.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 537.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 529.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 524.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 505.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 505.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 503.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 502.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 486.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 480.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 478.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 474.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 469.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 463.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 463.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 461.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 458.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 450.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 448.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 447.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 446.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 444.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 444.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 441.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 438.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 437.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 434.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 433.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 419.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 418.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 418.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 418.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 414.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 414.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 410.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 408.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 405.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 405.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 405.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 405.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 402.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 401.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 399.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 398.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 398.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 398.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 398.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 397.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 397.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 397.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 395.7
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 395.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 395.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 391.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 389.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 388.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 388.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 388.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 388.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 386.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 384.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 378.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 378.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 376.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 375.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 375.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 373.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 373.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 372.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 371.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 371.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 370.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 370.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 369.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 368.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 367.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 367.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 367.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 364.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 364.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 361.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 361.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 361.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 361.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 360.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 360.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 359.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 359.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 357.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 357.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 356.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 356.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 355.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 355.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 353.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 353.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 353.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 353.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 352.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 352.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 350.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 350.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 349.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 349.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 346.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 346.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 346.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 346.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 346.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 345.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 345.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 345.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 343.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 343.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 343.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 342.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 341.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 341.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 340.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 340.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 340.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 338.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 337.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 337.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 333.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 331.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 331.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 330.2
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 329.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 329.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 328.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 325.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 324.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 324.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 324.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 324.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 323.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 323.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 322.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 321.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 320.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 320.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 320.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 319.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 319.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 319.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 319.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 318.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 317.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 316.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 316.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 314.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 313.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 313.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 313.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 313.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 312.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 312.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 312.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 311.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 311.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 311.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 311.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 311.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 310.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 310.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 309.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 309.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 306.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 305.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 305.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 304.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 304.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 303.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 302.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 301.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 300.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 300.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 299.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 298.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 297.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 297.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 296.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 295.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 292.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 292.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 290.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 290.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 290.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 289.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 289.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 289.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 288.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 287.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 286.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 286.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 285.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 283.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 283.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 281.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 280.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 279.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 279.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 278.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 278.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 277.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 276.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 275.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 274.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 274.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 272.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 272.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 271.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 271.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 269.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 269.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 269.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 267.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 267.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 266.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 265.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 262.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 260.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 257.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 253.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 251.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 250.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 247.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 247.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 246.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 242.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 240.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 238.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 232.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 231.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 229.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 224.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 223.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 211.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 209.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 207.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 200.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 173.5
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 401.2
Samples: 246

Max nTPM: 790.6
Min nTPM: 150.9
Std nTPM: 86.9
Median nTPM: 391.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 790.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 715.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 703.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 701.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 669.2
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 597.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 581.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 572.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 565.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 545.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 542.0
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 537.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 536.3
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 534.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 532.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 531.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 526.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 521.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 515.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 511.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 506.4
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 501.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 500.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 499.4
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 499.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 497.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 495.1
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 494.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 494.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 492.2
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 490.7
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 490.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 489.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 488.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 482.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 482.1
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 481.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 480.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 478.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 475.7
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 473.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 472.8
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 472.1
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 468.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 467.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 465.9
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 463.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 462.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 462.8
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 462.4
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 462.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 461.9
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 461.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 460.4
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 457.8
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 457.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 455.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 455.5
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 454.5
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 453.8
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 452.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 451.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 448.3
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 445.7
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 444.8
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 444.5
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 444.1
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 444.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 443.8
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 443.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 442.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 441.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 441.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 440.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 439.9
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 438.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 438.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 437.6
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 437.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 436.9
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 435.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 434.4
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 432.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 432.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 431.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 430.0
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 429.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 424.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 423.5
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 422.7
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 421.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 420.5
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 419.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 418.7
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 417.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 417.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 416.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 415.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 415.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 414.3
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 413.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 412.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 412.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 410.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 408.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 408.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 407.4
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 404.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 402.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 402.4
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 401.4
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 400.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 399.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 398.6
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 398.5
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 398.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 398.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 394.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 394.4
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 393.2
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 392.9
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 392.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 391.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 390.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 389.1
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 388.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 387.7
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 385.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 385.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 384.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 384.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 383.8
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 383.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 381.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 379.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 379.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 378.2
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 376.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 376.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 376.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 375.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 374.5
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 374.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 373.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 373.4
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 372.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 372.4
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 371.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 371.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 371.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 370.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 369.5
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 369.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 368.5
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 368.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 367.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 366.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 366.5
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 365.5
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 365.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 364.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 364.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 364.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 364.3
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 363.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 362.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 361.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 361.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 361.1
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 359.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 359.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 358.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 355.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 355.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 354.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 353.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 352.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 352.0
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 351.7
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 351.2
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 351.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 349.2
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 348.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 348.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 347.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 346.8
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 346.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 345.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 345.3
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 345.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 342.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 342.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 342.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 341.5
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 340.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 339.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 336.7
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 336.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 335.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 333.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 332.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 330.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 329.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 327.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 326.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 325.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 322.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 321.6
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 321.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 321.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 320.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 318.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 316.3
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 316.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 314.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 312.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 311.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 311.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 311.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 308.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 307.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 306.3
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 304.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 300.3
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 296.4
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 295.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 295.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 293.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 293.3
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 290.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 288.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 286.2
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 281.8
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 280.7
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 274.2
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 272.2
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 269.7
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 265.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 258.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 258.0
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 246.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 237.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 223.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 221.3
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 180.6
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 150.9
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Brain - Putamen (basal ganglia)
Average nTPM: 375.1
Samples: 205

Max nTPM: 550.5
Min nTPM: 207.4
Std nTPM: 63.8
Median nTPM: 373.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 550.5
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 532.0
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 522.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 518.4
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 517.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 510.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 508.4
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 498.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 497.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 493.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 491.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 491.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 490.4
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 479.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 477.2
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 475.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 472.3
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 470.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 468.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 462.8
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 461.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 461.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 461.1
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 461.0
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 461.0
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 460.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 458.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 453.3
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 449.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 447.2
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 445.4
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 443.8
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 443.6
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 443.3
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 442.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 440.1
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 436.3
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 433.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 433.1
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 432.5
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 428.8
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 421.5
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 421.0
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 420.4
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 420.3
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 417.6
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 415.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 414.9
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 414.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 413.9
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 412.8
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 412.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 412.1
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 411.6
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 410.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 410.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 410.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 409.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 408.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 407.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 406.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 405.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 404.6
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 404.3
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 402.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 400.7
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 399.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 399.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 397.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 397.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 397.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 395.0
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 392.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 391.8
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 388.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 386.8
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 385.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 384.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 384.6
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 384.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 383.8
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 383.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 382.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 382.6
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 380.9
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 380.7
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 380.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 379.9
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 378.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 378.8
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 378.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 378.2
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 378.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 378.0
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 377.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 375.6
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 374.7
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 374.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 374.4
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 374.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 373.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 373.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 373.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 372.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 372.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 371.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 371.1
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 371.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 369.6
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 367.5
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 366.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 365.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 365.1
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 364.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 363.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 363.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 359.9
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 359.1
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 358.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 355.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 355.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 354.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 354.4
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 353.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 353.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 352.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 352.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 351.9
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 351.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 346.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 346.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 345.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 345.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 344.7
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 343.8
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 343.3
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 343.2
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 342.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 342.2
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 341.1
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 341.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 341.0
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 339.9
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 338.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 338.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 338.0
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 337.9
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 337.8
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 335.9
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 335.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 333.6
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 333.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 332.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 332.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 331.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 330.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 330.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 327.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 327.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 327.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 327.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 327.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 325.3
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 323.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 322.8
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 322.5
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 320.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 318.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 316.1
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 315.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 315.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 314.4
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 312.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 311.5
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 310.5
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 310.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 310.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 309.6
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 305.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 305.4
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 304.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 304.6
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 303.8
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 298.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 297.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 292.8
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 290.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 289.3
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 289.1
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 288.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 287.7
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 287.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 283.1
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 278.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 277.5
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 271.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 269.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 269.0
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 266.6
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 257.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 256.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 251.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 241.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 240.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 207.4
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

543.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 387.7
FF:10164-103B2 76 years, female 387.7
Nucleus accumbens
Scaled Tags Per Million: 419.1
FF:10037-101F1 23-56 years, mixed 419.1
Putamen
Scaled Tags Per Million: 526.8
FF:10176-103C5 60 years, female 526.8
Globus pallidus
Scaled Tags Per Million: 543.6
FF:10175-103C4 60 years, female 843.6
FF:10161-103A8 76 years, female 243.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

247.0
Pig sample Sample description nTPM
Caudate
nTPM: 213.5
Samples: 4

Max nTPM: 267.9
Min nTPM: 181.2
Sample A Female 185.5
Sample B Female 219.2
Sample C Male 267.9
Sample D Male 181.2
Putamen
nTPM: 247.0
Samples: 4

Max nTPM: 306.9
Min nTPM: 197.7
Sample A Female 218.7
Sample B Female 197.7
Sample C Male 306.9
Sample D Male 264.7
Septum
nTPM: 224.7
Samples: 4

Max nTPM: 278.7
Min nTPM: 196.9
Sample A Female 219.3
Sample B Female 196.9
Sample C Male 278.7
Sample D Male 203.9
Ventral pallidum
nTPM: 221.2
Samples: 4

Max nTPM: 267.1
Min nTPM: 189.9
Sample A Female 189.9
Sample B Female 231.1
Sample C Male 267.1
Sample D Male 196.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

462.9
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 354.7
Samples: 4

Max nTPM: 400.0
Min nTPM: 315.1
Sample A Male 344.3
Sample B Male 400.0
Sample C Female 315.1
Sample D Female 359.2
Septum
nTPM: 462.9
Samples: 4

Max nTPM: 482.8
Min nTPM: 406.9
Sample A Male 481.3
Sample B Male 482.8
Sample C Female 480.4
Sample D Female 406.9
Ventral forebrain
nTPM: 412.8
Samples: 4

Max nTPM: 513.0
Min nTPM: 372.0
Sample A Male 385.5
Sample B Male 380.5
Sample C Female 513.0
Sample D Female 372.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

6.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.6
75934529 Antisense, RP_060530_01_E05, Mouse strain C57BL/6J (56 days, male) 7.9
68499398 Antisense, RP_050118_01_E02, Mouse strain C57BL/6J (56 days, male) 3.2
Pallidum
Expression energy: 6.3
75934529 Antisense, RP_060530_01_E05, Mouse strain C57BL/6J (56 days, male) 8.8
68499398 Antisense, RP_050118_01_E02, Mouse strain C57BL/6J (56 days, male) 3.7

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