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TISSUE PRIMARY DATA LIVER Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Liver
Tissue proteome
Liver
LIVER - Expression summary
Protein expression
Liveri

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Cholangiocytes: Not detected
Hepatocytes: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:273.3 nTPM
HPA:154.1 nTPM
GTEx:273.3 nTPM
FANTOM5:715.9 Scaled Tags Per Million

LIVER - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044708
Cholangiocytes Not detected
Hepatocytes Medium


LIVER - HPA RNA-seqi

The RNA-seq details section shows detailed information about the individual samples used for the transcript profiling and results of the RNA-seq analysis.

Information about each individual sample is listed below, including gender, age, a tissue section image and estimated fractions of cell types. nTPM (normalized transcripts per million) values give a quantification of the gene abundance which is comparable between different genes and samples.
Average nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

154.1
N/A
Female, age 60
Liver sample 21
nTPM: 220.8
overview
Male, age 54
Liver sample 23
nTPM: 145.6
Cell types%
Hepatocytes:
80

Fibroblasts:
15

Other cell types:
5

overview
Male, age 74
Liver sample 24
nTPM: 185.2
Cell types%
Hepatocytes:
85

Fibroblasts:
5

Other cell types:
10

overview
Female, age 62
Liver sample 350
nTPM: 62.7
Cell types%
Hepatocytes:
70

Fibroblasts:
10

Other cell types:
20

overview
Male, age 78
Liver sample 351
nTPM: 92.3
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Male, age 53
Liver sample 352
nTPM: 154.9
Cell types%
Hepatocytes:
80

Fibroblasts:
5

Other cell types:
15

overview
Male, age 77
Liver sample 353
nTPM: 131.4
Cell types%
Hepatocytes:
75

Fibroblasts:
5

Other cell types:
20

overview
Female, age 72
Liver sample 359
nTPM: 238
Cell types%
Hepatocytes:
50

Fibroblasts:
10

Other cell types:
40

overview
Male, age 70
Liver sample 367
nTPM: 128.5
Cell types%
Hepatocytes:
65

Fibroblasts:
10

Other cell types:
25

overview
Female, age 23
Liver sample 396
nTPM: 181.4
Cell types%
Hepatocytes:
70

Fibroblasts:
5

Other cell types:
25


LIVER - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

273.3
GTEx sample id Sample description nTPM
Liver
Average nTPM: 273.3
Samples: 226

Max nTPM: 674.2
Min nTPM: 140.2
Std nTPM: 68.1
Median nTPM: 261.8
GTEX-1CB4J-0726-SM-7IGN8 60-69 years, male 674.2
GTEX-U8XE-1526-SM-4E3HT 30-39 years, male 470.9
GTEX-S32W-1926-SM-4AD63 50-59 years, female 465.6
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 460.4
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 455.7
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 434.2
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 427.9
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 423.1
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 420.0
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 413.6
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 403.2
GTEX-O5YV-0726-SM-EV798 60-69 years, female 398.0
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 383.1
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 382.4
GTEX-REY6-1226-SM-48FDR 60-69 years, male 379.0
GTEX-S33H-1626-SM-4AD68 30-39 years, male 377.6
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 375.9
GTEX-1GF9W-0826-SM-7MKHI 60-69 years, male 368.3
GTEX-11TT1-1726-SM-5EQLJ 20-29 years, male 361.3
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 359.6
GTEX-1AX8Z-1026-SM-7189R 60-69 years, male 357.3
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 357.2
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 355.7
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 355.1
GTEX-13PVQ-1526-SM-5IFEQ 50-59 years, male 348.2
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 348.0
GTEX-1LH75-0926-SM-EAZ5C 50-59 years, female 347.9
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 347.3
GTEX-1GN73-1126-SM-9OSW5 60-69 years, male 343.4
GTEX-132AR-0426-SM-5IFH8 50-59 years, female 343.0
GTEX-11TUW-1726-SM-5BC5C 60-69 years, male 341.7
GTEX-1CB4F-1726-SM-7MGXH 60-69 years, male 341.6
GTEX-15RJE-1126-SM-6LPI5 40-49 years, male 341.0
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 340.3
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 340.0
GTEX-1ICLY-1526-SM-C1YS4 50-59 years, male 338.6
GTEX-WY7C-0726-SM-4ONCB 50-59 years, male 335.8
GTEX-O5YT-0826-SM-3TW8N 20-29 years, male 335.1
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 331.1
GTEX-1GZ4I-1526-SM-9OSW9 50-59 years, male 329.0
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 328.7
GTEX-Q734-0326-SM-48U15 40-49 years, female 328.0
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 326.3
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 323.1
GTEX-1JJEA-1526-SM-CNNPK 60-69 years, male 322.6
GTEX-XXEK-1126-SM-4BRUX 50-59 years, male 320.6
GTEX-R53T-0326-SM-48FEC 50-59 years, female 318.6
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 317.6
GTEX-1EN7A-2026-SM-7MGY4 40-49 years, male 317.5
GTEX-YECK-1926-SM-4W21H 60-69 years, male 313.9
GTEX-14JG1-1626-SM-664NH 40-49 years, male 313.7
GTEX-18A66-2026-SM-7189C 60-69 years, male 313.0
GTEX-1B932-1426-SM-793AN 40-49 years, female 312.7
GTEX-14XAO-0226-SM-68728 60-69 years, female 311.7
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 311.6
GTEX-QESD-2026-SM-447BI 20-29 years, male 310.9
GTEX-QEL4-1226-SM-447A4 50-59 years, male 309.8
GTEX-WVLH-2126-SM-EYYWD 50-59 years, male 307.5
GTEX-15SZO-1226-SM-6LPIP 50-59 years, male 307.1
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 307.1
GTEX-1A32A-0826-SM-72D5C 50-59 years, female 305.8
GTEX-18D9B-1526-SM-7KFRK 60-69 years, male 303.5
GTEX-1HCU7-1726-SM-B2LX9 50-59 years, male 303.5
GTEX-1JJ6O-0826-SM-CXZJL 60-69 years, male 303.5
GTEX-1NV8Z-1626-SM-DPRYT 60-69 years, male 303.3
GTEX-1HCVE-1526-SM-B2LWW 50-59 years, male 302.1
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 301.0
GTEX-1QP6S-1326-SM-DPRZ8 40-49 years, male 301.0
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 300.5
GTEX-1H11D-0826-SM-9OSWB 40-49 years, male 298.1
GTEX-148VI-0626-SM-5TDDH 60-69 years, female 296.8
GTEX-15RJ7-2026-SM-6LPJ4 40-49 years, male 295.7
GTEX-P78B-1326-SM-3P611 40-49 years, female 294.5
GTEX-1R9JW-0826-SM-DPRZJ 30-39 years, female 293.5
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 291.2
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 290.7
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 290.7
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 288.4
GTEX-1B8SG-1326-SM-79ONT 50-59 years, male 288.0
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 286.7
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 286.2
GTEX-1B8L1-0726-SM-7P8RT 60-69 years, male 285.5
GTEX-QEG4-1826-SM-CKZN9 30-39 years, male 282.8
GTEX-1LGRB-0626-SM-CNNQH 50-59 years, female 281.8
GTEX-1E2YA-1226-SM-7MGY3 50-59 years, male 280.6
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 279.4
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 278.9
GTEX-1IKK5-0326-SM-C1YPY 60-69 years, male 278.9
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 278.8
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 278.3
GTEX-WK11-1326-SM-4OOSI 50-59 years, male 278.3
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 278.3
GTEX-13O1R-2026-SM-5KM3N 60-69 years, male 277.2
GTEX-17HGU-1826-SM-7IGQM 50-59 years, male 277.0
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 276.6
GTEX-17HII-1026-SM-7IGLY 50-59 years, male 275.2
GTEX-1EH9U-1126-SM-7IGLU 60-69 years, male 274.6
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 274.0
GTEX-1QPFJ-1126-SM-E9U5V 30-39 years, female 274.0
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 273.5
GTEX-13113-1326-SM-5GCOI 60-69 years, female 273.3
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 272.6
GTEX-1399T-0826-SM-5IFES 60-69 years, male 272.5
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 271.3
GTEX-ZEX8-0826-SM-4WKHK 50-59 years, male 270.9
GTEX-1EKGG-1226-SM-7IGNO 60-69 years, male 269.3
GTEX-QV44-0326-SM-C1YQX 50-59 years, male 268.1
GTEX-P44G-1126-SM-3NM9D 30-39 years, male 267.3
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 267.0
GTEX-1HT8W-0826-SM-C1YRJ 30-39 years, male 266.5
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 262.9
GTEX-1CAMQ-1426-SM-7MKFL 40-49 years, male 262.0
GTEX-1GF9X-0426-SM-7MKHN 40-49 years, female 261.9
GTEX-1KD5A-1226-SM-CXZK7 50-59 years, male 261.7
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 258.1
GTEX-14E7W-1526-SM-6871X 70-79 years, male 257.4
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 256.7
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 256.6
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 255.6
GTEX-14PHX-0526-SM-664NW 50-59 years, male 255.4
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 254.9
GTEX-12696-0826-SM-5EGGE 60-69 years, male 254.5
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 254.2
GTEX-1QP66-0226-SM-DPRXS 50-59 years, male 252.9
GTEX-1HB9E-0626-SM-AHZ4K 50-59 years, male 252.6
GTEX-1QCLZ-1226-SM-EAZ49 60-69 years, female 252.5
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 252.4
GTEX-14PJO-1726-SM-68719 60-69 years, male 252.3
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 252.1
GTEX-1IKJJ-1526-SM-C1YSC 60-69 years, male 251.8
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 249.7
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 248.8
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 246.8
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 246.3
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 245.6
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 244.9
GTEX-ZF29-2026-SM-DNZYW 60-69 years, female 244.5
GTEX-17EVP-1026-SM-7IGOZ 40-49 years, male 244.3
GTEX-17HHE-0126-SM-79398 50-59 years, male 243.9
GTEX-1BAJH-1526-SM-7RHGI 70-79 years, male 243.9
GTEX-1K9T9-0726-SM-CXZJZ 50-59 years, female 243.9
GTEX-1B996-1426-SM-7EPIA 60-69 years, male 243.8
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 242.5
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 242.0
GTEX-1PBJJ-0626-SM-DPRYO 30-39 years, male 241.8
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 240.5
GTEX-1KANB-2226-SM-DHXJW 50-59 years, male 240.0
GTEX-1GF9V-1226-SM-7MKGY 60-69 years, male 239.7
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 238.8
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 237.1
GTEX-1S5VW-1826-SM-EAZ53 60-69 years, male 236.8
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 236.7
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 235.8
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 235.6
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 235.3
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 234.8
GTEX-1HBPI-1026-SM-AHZ4N 50-59 years, male 233.9
GTEX-1C6VQ-1626-SM-79OO1 50-59 years, male 233.4
GTEX-RU72-1426-SM-46MUF 50-59 years, female 232.7
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 232.3
GTEX-1GN2E-0926-SM-9WPOH 60-69 years, male 232.3
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 232.1
GTEX-1KAFJ-0726-SM-CXZKF 50-59 years, male 232.0
GTEX-147GR-1326-SM-7IGLB 60-69 years, male 231.5
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 231.3
GTEX-X261-1726-SM-4PQYT 50-59 years, male 231.1
GTEX-1GN1U-0926-SM-9WPPY 50-59 years, female 229.8
GTEX-17MF6-1126-SM-7DUFS 40-49 years, male 228.7
GTEX-11ZUS-2526-SM-59872 30-39 years, male 228.3
GTEX-18A7A-1526-SM-72D69 50-59 years, female 228.0
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 226.4
GTEX-1PIIG-1326-SM-EXOIR 30-39 years, male 226.4
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 223.9
GTEX-13X6J-1826-SM-5TDCT 50-59 years, male 223.9
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 222.7
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 222.0
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 220.7
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 220.6
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 217.2
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 217.2
GTEX-1F75A-1626-SM-9JGGT 50-59 years, male 217.1
GTEX-1HBPH-2626-SM-A96TV 40-49 years, female 215.6
GTEX-15DYW-1326-SM-6LPIV 60-69 years, female 215.0
GTEX-1B933-1226-SM-731DW 50-59 years, female 214.1
GTEX-18A6Q-2026-SM-718AQ 60-69 years, male 212.7
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 212.7
GTEX-1KD4Q-1526-SM-D4P3L 40-49 years, male 212.6
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 212.5
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 212.4
GTEX-1J8EW-1626-SM-C1YQ8 60-69 years, female 212.3
GTEX-OIZF-0826-SM-3MJGO 60-69 years, male 212.3
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 211.5
GTEX-1JMLX-1326-SM-CXZJO 50-59 years, male 211.5
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 211.3
GTEX-1ICG6-1026-SM-B2LY6 70-79 years, female 210.5
GTEX-1KWVE-0326-SM-EV7AF 30-39 years, male 210.1
GTEX-13112-1426-SM-5EGH8 50-59 years, male 209.5
GTEX-1EWIQ-0726-SM-7MKFW 70-79 years, female 207.3
GTEX-1I1GR-1526-SM-CNNQE 60-69 years, male 207.3
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 206.0
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 205.7
GTEX-144GL-1426-SM-79OMA 50-59 years, male 203.6
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 203.0
GTEX-1I1HK-1126-SM-AHZ2L 60-69 years, male 202.8
GTEX-18465-1626-SM-7LG6N 50-59 years, male 201.2
GTEX-1A8G7-1126-SM-731ED 60-69 years, male 199.4
GTEX-1A8FM-1226-SM-7IGMD 50-59 years, female 198.3
GTEX-Y111-0726-SM-EYYVM 50-59 years, male 197.9
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 194.1
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 193.3
GTEX-17F96-1226-SM-79OK2 70-79 years, male 191.8
GTEX-1MJIX-0726-SM-DPRYP 40-49 years, male 191.3
GTEX-1RQEC-1126-SM-EAZ5E 60-69 years, male 190.3
GTEX-11GSP-0626-SM-5986T 60-69 years, female 185.5
GTEX-14BIL-1326-SM-79OMR 50-59 years, male 184.7
GTEX-1S82Y-1026-SM-EV7BJ 40-49 years, male 184.4
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 181.6
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 180.8
GTEX-RN64-1826-SM-48FDV 50-59 years, male 179.1
GTEX-15ER7-1826-SM-6LLI7 20-29 years, female 178.3
GTEX-15SHU-1826-SM-7KUKS 40-49 years, female 174.4
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 173.1
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 169.0
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 165.0
GTEX-1AMFI-0826-SM-731DV 50-59 years, female 157.2
GTEX-1AX9I-1626-SM-72D5D 60-69 years, male 140.2
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LIVER - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

715.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Liver
Scaled Tags Per Million: 715.9
FF:10018-101C9 64,69,70 years, mixed 715.9

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