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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:130.0 nTPM
HPA Brain:152.9 nTPM
GTEx:130.0 nTPM
FANTOM5:192.4 Scaled Tags Per Million

SPINAL CORD - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.9
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 143.0
2565 Male, age 75, midline 197.5
2048 Male, age 55, midline 152.4
2816 Male, age 47, midline 124.9
1981 Female, age 72, midline 123.3
2194 Female, age 79, both hemispheres 116.9
Cervical spinal cord, dorsal horn
nTPM: 133.9
2721 Male, age 90, both hemispheres 211.5
1877 Male, age 55, unknown 128.9
2296 Male, age 66, both hemispheres 128.8
2173 Female, age 72, unknown 124.9
2069 Male, age 47, both hemispheres 114.9
2297 Male, age 75, both hemispheres 94.3
Cervical spinal cord, ventral horn
nTPM: 152.9
2809 Male, age 90, both hemispheres 228.0
2098 Female, age 72, unknown 155.5
2480 Male, age 75, both hemispheres 151.3
2295 Male, age 66, both hemispheres 150.2
2820 Female, age 79, both hemispheres 117.3
2068 Male, age 55, unknown 115.4

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

130.0
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 130.0
Samples: 159

Max nTPM: 378.5
Min nTPM: 61.5
Std nTPM: 41.8
Median nTPM: 125.3
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 378.5
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 226.1
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 223.8
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 220.5
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 215.0
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 212.7
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 210.1
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 204.1
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 203.3
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 202.4
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 201.8
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 198.7
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 191.0
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 190.9
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 183.3
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 181.2
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 180.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 176.3
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 174.2
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 173.2
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 172.2
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 171.0
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 170.9
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 168.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 168.9
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 167.0
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 166.1
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 165.8
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 165.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 163.7
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 162.0
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 161.9
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 161.1
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 152.0
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 152.0
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 152.0
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 151.5
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 151.0
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 150.4
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 150.1
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 149.6
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 148.7
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 147.3
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 145.0
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 144.1
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 143.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 142.3
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 142.3
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 142.2
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 142.0
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 139.8
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 139.5
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 139.4
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 138.4
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 138.3
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 136.0
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 135.8
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 135.8
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 135.6
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 135.4
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 135.1
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 134.6
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 134.4
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 134.3
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 133.9
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 133.3
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 133.3
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 133.1
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 133.1
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 131.6
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 131.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 130.8
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 129.8
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 129.5
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 128.9
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 128.5
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 128.5
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 127.8
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 127.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 125.3
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 124.9
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 124.6
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 124.2
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 123.3
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 123.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 123.2
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 122.8
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 122.2
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 121.4
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 121.2
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 120.8
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 119.8
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 119.4
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 118.4
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 118.3
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 117.2
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 116.8
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 116.6
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 116.2
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 114.9
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 114.4
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 114.1
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 114.0
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 113.9
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 113.3
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 112.9
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 112.6
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 112.0
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 111.9
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 109.3
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 109.3
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 108.4
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 106.7
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 104.6
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 104.6
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 103.5
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 102.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 102.2
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 100.6
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 99.8
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 99.2
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 98.8
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 98.3
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 98.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 97.1
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 96.3
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 96.0
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 95.6
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 95.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 95.0
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 93.6
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 93.6
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 91.0
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 90.8
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 90.6
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 90.3
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 88.8
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 87.4
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 86.8
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 86.2
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 85.8
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 85.3
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 84.1
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 83.6
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 82.9
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 82.0
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 81.8
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 75.4
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 74.7
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 73.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 72.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 70.0
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 69.0
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 68.3
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 67.6
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 66.1
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 65.1
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 62.8
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 61.5
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SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

192.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 192.4
FF:10159-103A6 76 years, female 239.0
FF:10181-103D1 60 years, female 145.7

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