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PNMA2
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  • PNMA2
TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:79.5 nTPM
HPA Brain:176.1 nTPM
GTEx:79.5 nTPM
FANTOM5:218.8 Scaled Tags Per Million
Pig:41.4 nTPM
Mouse:29.1 nTPM
Allen mouse:0.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001936
Glial cells Not detected
Neuronal cells Not detected


BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

176.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 97.6
1781 Male, age 74, unknown 116.7
1857 Female, age 85, left hemisphere 115.2
2290 Female, age 72, unknown 104.1
2846 Female, age 79, unknown 98.3
1854 Male, age 80, left hemisphere 97.9
2288 Male, age 75, left hemisphere 96.5
2481 Female, age 94, left hemisphere 77.0
2289 Male, age 61, right hemisphere 75.3
Globus pallidus, externus
nTPM: 39.8
2395 Male, age 75, both hemispheres 53.2
2772 Female, age 79, unknown 51.2
2646 Male, age 61, right hemisphere 36.5
1996 Male, age 80, right hemisphere 32.1
2567 Female, age 72, unknown 26.2
Globus pallidus, internus
nTPM: 37.2
2483 Female, age 94, right hemisphere 57.0
1818 Male, age 74, unknown 45.2
2287 Male, age 75, right hemisphere 43.9
2566 Female, age 72, unknown 34.3
2037 Male, age 80, right hemisphere 31.8
2778 Female, age 91, both hemispheres 27.8
2111 Female, age 85, right hemisphere 20.5
Nucleus accumbens
nTPM: 112.6
1856 Female, age 91, right hemisphere 172.9
2824 Male, age 61, right hemisphere 136.7
1783 Male, age 74, unknown 131.6
1806 Female, age 85, left hemisphere 115.4
2698 Female, age 72, unknown 107.4
2732 Male, age 80, right hemisphere 93.0
2286 Male, age 75, left hemisphere 92.6
2391 Female, age 94, left hemisphere 51.2
Nucleus basalis of Meynert
nTPM: 67.9
2393 Male, age 80, right hemisphere 91.8
2484 Female, age 94, left hemisphere 75.1
2821 Male, age 75, both hemispheres 68.9
2569 Male, age 61, both hemispheres 35.9
Nucleus of the diagonal band
nTPM: 176.1
1812 Female, age 91, both hemispheres 200.9
2775 Male, age 80, right hemisphere 195.5
2195 Female, age 85, both hemispheres 171.8
1979 Male, age 74, unknown 156.3
2029 Male, age 61, right hemisphere 156.1
Putamen
nTPM: 87.7
1838 Male, age 80, right hemisphere 123.3
1937 Female, age 91, right hemisphere 118.9
2466 Female, age 79, unknown 101.0
1829 Male, age 74, unknown 92.6
2482 Female, age 94, left hemisphere 64.3
2647 Male, age 75, left hemisphere 61.8
2489 Female, age 72, unknown 52.2
Septal nuclei
nTPM: 145.8
2031 Female, age 72, unknown 193.6
1960 Male, age 74, unknown 186.3
2009 Female, age 91, both hemispheres 172.8
2629 Female, age 94, right hemisphere 167.5
2059 Female, age 85, both hemispheres 120.4
2394 Male, age 61, left hemisphere 90.6
2199 Male, age 80, right hemisphere 89.3
Stria terminalis, bed nucleus
nTPM: 171.2
1974 Female, age 91, both hemispheres 195.0
2486 Female, age 94, both hemispheres 167.3
2201 Male, age 74, unknown 151.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

79.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 51.1
Samples: 246

Max nTPM: 172.1
Min nTPM: 11.4
Std nTPM: 25.5
Median nTPM: 47.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 172.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 126.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 120.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 116.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 115.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 107.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 103.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 102.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 101.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 99.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 98.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 96.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 96.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 95.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 93.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 93.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 93.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 93.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 93.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 91.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 91.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 90.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 88.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 88.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 86.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 86.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 85.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 84.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 84.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 83.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 83.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 83.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 82.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 82.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 80.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 79.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 79.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 78.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 78.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 77.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 77.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 76.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 76.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 76.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 75.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 74.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 73.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 72.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 71.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 71.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 70.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 70.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 69.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 69.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 69.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 69.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 68.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 68.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 68.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 65.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 64.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 64.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 64.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 62.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 62.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 62.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 62.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 61.9
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 61.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 61.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 61.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 60.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 60.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 60.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 60.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 60.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 60.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 59.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 59.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 59.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 58.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 58.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 58.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 57.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 57.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 57.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 56.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 56.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 56.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 56.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 56.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 56.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 55.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 55.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 54.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 54.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 54.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 53.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 53.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 53.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 53.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 53.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 52.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 52.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 52.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 52.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 52.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 51.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 51.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 51.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 51.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 51.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 50.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 50.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 49.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 49.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 49.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 49.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 48.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 48.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 47.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 47.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 47.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 47.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 47.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 46.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 46.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 46.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 46.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 46.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 44.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 43.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 43.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 43.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 43.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 42.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 42.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 42.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 41.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 41.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 41.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 41.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 40.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 40.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 40.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 40.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 39.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 39.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 39.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 38.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 38.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 38.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 38.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 38.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 38.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 37.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 37.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 37.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 37.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 37.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 37.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 37.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 37.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 37.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 37.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 36.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 36.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 35.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 35.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 35.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 35.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 35.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 34.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 34.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 34.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 34.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 33.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 33.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 32.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 32.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 32.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 31.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 30.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 30.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 30.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 30.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 30.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 30.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 30.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 30.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 29.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 29.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 29.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 28.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 28.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 27.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 27.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 26.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 26.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 26.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 26.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 25.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 25.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 25.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 25.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 24.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 24.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 24.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 24.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 23.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 23.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 23.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 23.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 23.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 22.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 22.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 21.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 21.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 21.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 20.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 20.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 19.7
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 19.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 19.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 19.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 18.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 18.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 18.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 18.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 18.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 17.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 17.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 17.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 16.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 16.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 15.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 15.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 15.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 15.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 14.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 14.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 14.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 11.4
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 79.5
Samples: 246

Max nTPM: 171.9
Min nTPM: 11.9
Std nTPM: 37.9
Median nTPM: 79.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 171.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 166.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 166.5
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 161.8
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 158.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 157.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 152.4
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 151.8
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 151.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 149.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 148.7
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 141.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 139.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 138.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 138.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 137.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 137.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 136.7
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 135.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 135.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 135.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 132.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 132.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 132.5
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 130.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 130.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 129.4
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 128.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 128.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 127.6
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 127.6
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 127.5
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 127.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 126.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 125.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 125.4
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 125.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 124.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 122.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 122.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 121.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 120.1
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 119.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 117.7
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 117.0
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 116.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 116.3
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 116.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 116.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 115.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 115.0
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 114.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 114.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 112.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 111.7
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 110.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 110.1
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 110.0
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 107.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 107.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 106.6
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 106.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 104.5
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 104.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 102.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 102.8
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 102.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 101.7
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 100.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 100.0
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 99.8
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 99.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 98.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 98.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 98.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 97.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 97.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 97.0
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 96.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 96.3
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 95.9
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 95.8
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 95.8
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 95.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 95.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 95.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 94.8
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 94.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 94.2
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 93.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 92.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 91.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 91.1
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 90.8
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 90.1
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 88.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 88.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 87.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 87.3
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 87.3
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 87.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 86.4
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 86.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 86.1
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 85.7
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 85.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 85.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 85.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 85.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 84.8
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 84.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 84.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 84.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 83.7
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 83.2
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 83.0
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 82.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 82.5
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 82.2
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 80.8
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 80.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 80.0
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 79.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 79.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 79.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 79.1
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 78.5
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 78.5
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 78.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 78.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 77.7
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 77.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 77.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 77.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 76.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 76.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 76.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 75.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 74.2
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 74.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 73.9
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 73.8
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 73.7
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 73.6
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 72.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 72.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 70.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 70.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 70.0
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 68.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 68.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 68.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 67.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 67.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 67.4
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 66.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 66.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 65.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 65.6
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 64.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 62.8
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 62.5
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 60.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 59.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 58.2
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 57.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 56.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 56.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 55.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 55.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 54.4
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 54.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 53.4
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 53.2
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 53.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 52.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 52.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 52.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 51.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 51.4
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 51.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 49.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 48.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 48.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 48.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 47.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 46.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 45.4
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 45.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 44.9
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 44.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 44.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 44.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 43.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 43.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 42.9
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 42.6
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 42.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 42.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 41.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 40.2
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 39.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 39.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 38.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 38.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 37.3
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 35.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 35.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 33.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 32.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 32.0
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 31.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 30.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 30.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 29.2
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 29.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 28.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 28.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 27.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 27.1
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 26.7
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 26.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 26.2
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 26.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 26.1
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 24.9
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 24.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 24.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 23.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 23.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 22.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 22.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 22.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 21.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 21.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 20.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 20.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 20.1
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 18.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 18.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 18.1
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 17.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 16.3
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 15.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 12.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 11.9
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Brain - Putamen (basal ganglia)
Average nTPM: 42.3
Samples: 205

Max nTPM: 106.9
Min nTPM: 8.7
Std nTPM: 22.6
Median nTPM: 38.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 106.9
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 106.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 102.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 98.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 93.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 88.8
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 88.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 87.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 84.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 83.1
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 82.3
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 81.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 81.7
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 80.9
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 80.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 79.9
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 78.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 77.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 77.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 76.1
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 74.5
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 73.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 73.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 72.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 72.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 71.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 71.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 70.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 69.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 69.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 68.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 68.7
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 68.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 68.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 68.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 67.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 65.8
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 65.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 65.3
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 64.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 63.9
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 63.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 63.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 62.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 62.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 62.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 61.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 61.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 61.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 61.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 59.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 58.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 58.9
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 58.9
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 58.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 58.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 57.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 55.6
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 55.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 54.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 52.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 52.0
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 51.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 50.5
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 50.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 49.9
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 49.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 49.3
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 48.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 48.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 47.9
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 47.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 47.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 47.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 46.5
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 46.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 45.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 45.7
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 45.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 45.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 44.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 44.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 44.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 44.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 43.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 43.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 43.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 43.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 42.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 42.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 42.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 42.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 41.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 41.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 41.1
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 40.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 40.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 40.0
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 39.9
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 39.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 39.6
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 39.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 38.9
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 38.6
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 38.5
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 37.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 37.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 37.7
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 37.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 37.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 37.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 37.4
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 37.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 36.0
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 35.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 34.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 34.7
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 34.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 34.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 33.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 33.4
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 32.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 32.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 31.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 31.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 30.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 30.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 30.5
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 30.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 30.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 30.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 29.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 28.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 28.9
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 28.7
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 28.3
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 27.9
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 27.8
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 27.7
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 27.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 27.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 26.6
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 26.2
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 26.0
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 25.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 25.7
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 25.5
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 25.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 24.9
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 24.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 23.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 23.6
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 23.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 23.2
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 23.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 22.3
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 22.0
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 22.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 22.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 21.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 20.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 20.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 20.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 20.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 19.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 19.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 19.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 18.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 18.6
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 18.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 18.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 18.1
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 18.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 18.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 18.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 17.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 17.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 17.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 17.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 17.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 16.6
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 16.6
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 16.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 16.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 16.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 16.1
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 15.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 15.2
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 14.9
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 14.8
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 14.7
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 14.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 14.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 13.9
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 13.6
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 13.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 12.8
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 12.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 12.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 12.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 12.0
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 10.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.2
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 10.0
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 8.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

218.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 137.2
FF:10164-103B2 76 years, female 137.2
Nucleus accumbens
Scaled Tags Per Million: 207.7
FF:10037-101F1 23-56 years, mixed 207.7
Putamen
Scaled Tags Per Million: 218.8
FF:10176-103C5 60 years, female 218.8
Globus pallidus
Scaled Tags Per Million: 71.8
FF:10175-103C4 60 years, female 116.9
FF:10161-103A8 76 years, female 26.7

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.4
Pig sample Sample description nTPM
Caudate
nTPM: 34.0
Samples: 4

Max nTPM: 37.0
Min nTPM: 29.5
Sample A Female 36.6
Sample B Female 32.8
Sample C Male 37.0
Sample D Male 29.5
Putamen
nTPM: 34.2
Samples: 4

Max nTPM: 52.0
Min nTPM: 25.9
Sample A Female 25.9
Sample B Female 28.7
Sample C Male 52.0
Sample D Male 30.2
Septum
nTPM: 41.4
Samples: 4

Max nTPM: 55.2
Min nTPM: 24.9
Sample A Female 49.8
Sample B Female 35.8
Sample C Male 55.2
Sample D Male 24.9
Ventral pallidum
nTPM: 35.5
Samples: 4

Max nTPM: 48.1
Min nTPM: 25.3
Sample A Female 42.8
Sample B Female 25.3
Sample C Male 48.1
Sample D Male 25.8

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 24.1
Samples: 4

Max nTPM: 25.5
Min nTPM: 22.6
Sample A Male 25.5
Sample B Male 22.6
Sample C Female 24.7
Sample D Female 23.5
Septum
nTPM: 29.1
Samples: 4

Max nTPM: 34.2
Min nTPM: 25.6
Sample A Male 34.2
Sample B Male 25.6
Sample C Female 27.7
Sample D Female 28.8
Ventral forebrain
nTPM: 27.6
Samples: 4

Max nTPM: 30.2
Min nTPM: 24.3
Sample A Male 27.2
Sample B Male 30.2
Sample C Female 24.3
Sample D Female 28.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

0.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.7
69816374 Antisense, RP_050505_04_H07, Mouse strain C57BL/6J (56 days, male) 0.7
Pallidum
Expression energy: 0.9
69816374 Antisense, RP_050505_04_H07, Mouse strain C57BL/6J (56 days, male) 0.9

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