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RPL36A
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  • RPL36A
BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:1204.3 nTPM
HPA Brain:41.3 nTPM
GTEx:1204.3 nTPM
FANTOM5:44.0 Scaled Tags Per Million
Pig:49.8 nTPM
Mouse:295.6 nTPM

AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

41.3
Sample id Sample description nTPM
Amygdala
nTPM: 35.9
2695 Female, age 67, right hemisphere 51.2
2514 Male, age 75, right hemisphere 45.4
2814 Male, age 76, right hemisphere 30.3
1987 Female, age 91, left hemisphere 27.7
2517 Female, age 94, left hemisphere 24.8
Basal amygdala
nTPM: 37.7
2827 Female, age 67, right hemisphere 65.1
2685 Female, age 94, left hemisphere 37.5
2110 Male, age 80, left hemisphere 36.8
2609 Male, age 75, right hemisphere 33.8
1955 Male, age 76, both hemispheres 27.2
2243 Female, age 91, right hemisphere 25.6
Central amygdala
nTPM: 35.5
2826 Female, age 94, left hemisphere 61.1
2515 Male, age 75, right hemisphere 36.4
2701 Female, age 91, right hemisphere 28.2
1905 Male, age 76, both hemispheres 28.1
2239 Male, age 80, left hemisphere 23.9
Corticomedial amygdala
nTPM: 28.5
2829 Male, age 80, left hemisphere 38.6
2240 Male, age 76, both hemispheres 31.1
2429 Female, age 94, left hemisphere 29.6
2428 Male, age 75, right hemisphere 27.2
2242 Female, age 91, right hemisphere 24.1
2535 Female, age 67, right hemisphere 20.4
Lateral amygdala
nTPM: 41.3
2830 Female, age 67, right hemisphere 106.8
2516 Male, age 75, right hemisphere 37.6
1883 Male, age 76, both hemispheres 34.3
2534 Female, age 94, left hemisphere 29.4
2256 Male, age 80, left hemisphere 21.3
2255 Female, age 91, right hemisphere 18.6

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1204.3
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1204.3
Samples: 152

Max nTPM: 3488.4
Min nTPM: 573.8
Std nTPM: 472.2
Median nTPM: 1075.0
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 3488.4
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 3295.5
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 3113.3
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2564.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 2473.9
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 2110.2
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 2028.7
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 1999.2
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 1963.7
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 1892.5
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 1828.5
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 1817.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 1812.3
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 1778.3
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 1775.5
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 1773.6
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1743.4
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1700.8
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1663.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 1652.5
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1612.5
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1605.4
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1602.3
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 1594.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 1542.7
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 1538.5
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 1525.6
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1502.6
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1467.5
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1466.7
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1466.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1423.7
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1413.2
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1406.4
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1391.2
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1383.1
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1381.1
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1362.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1351.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1342.4
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1340.7
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1338.5
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1337.9
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1332.0
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1331.3
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1328.6
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1326.8
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1285.6
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1285.5
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1268.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1266.2
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1256.3
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1248.4
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1242.0
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 1238.6
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1227.8
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1227.1
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1226.1
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1214.4
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1210.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1208.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1208.0
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1200.6
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1199.9
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1191.1
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1180.3
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1167.0
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1158.1
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1146.4
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1138.7
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1133.1
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1129.2
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1123.0
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1117.1
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1111.6
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1077.5
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1072.5
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1071.3
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1068.8
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1064.1
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 1060.4
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1059.6
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1057.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1056.0
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1050.8
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1042.5
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 1036.4
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1032.1
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1027.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1026.9
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1026.5
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1011.6
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1009.0
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1007.3
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 997.4
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 995.4
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 992.5
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 988.7
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 961.7
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 959.6
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 952.2
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 951.9
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 951.4
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 951.3
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 950.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 945.0
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 935.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 933.5
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 932.0
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 926.8
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 922.2
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 919.4
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 918.1
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 914.8
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 911.9
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 907.6
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 902.2
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 893.1
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 890.0
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 888.1
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 879.3
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 870.3
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 866.6
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 855.6
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 850.3
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 844.1
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 842.3
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 829.5
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 816.0
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 809.6
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 808.0
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 806.2
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 797.8
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 778.8
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 771.2
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 768.5
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 765.7
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 756.5
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 750.4
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 747.1
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 746.8
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 673.7
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 671.5
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 664.9
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 663.2
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 656.3
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 655.2
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 645.4
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 626.7
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 615.0
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 599.2
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 573.8
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AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

44.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 44.0
FF:10151-102I7 76 years, female 44.0

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.8
Pig sample Sample description nTPM
Amygdala
nTPM: 49.8
Samples: 4

Max nTPM: 62.8
Min nTPM: 30.4
Sample A Female 62.8
Sample B Female 60.2
Sample C Male 45.6
Sample D Male 30.4

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

295.6
Mouse sample Sample description nTPM
Amygdala
nTPM: 295.6
Samples: 4

Max nTPM: 320.1
Min nTPM: 268.9
Sample A Male 268.9
Sample B Male 306.2
Sample C Female 320.1
Sample D Female 287.2

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