HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:86.8 nTPM
HPA Brain:100.9 nTPM
GTEx:86.8 nTPM
FANTOM5:147.3 Scaled Tags Per Million
Pig:102.0 nTPM
Mouse:251.7 nTPM
Allen mouse:9.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004334
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 100.9
Sample id Sample description nTPM
Hippocampus
nTPM: 80.9
1898 Male, age 80, left hemisphere 95.4
2621 Female, age 67, right hemisphere 86.3
1855 Male, age 76, left hemisphere 84.7
1911 Female, age 85, right hemisphere 83.1
2529 Female, age 94, left hemisphere 68.6
2148 Female, age 91, left hemisphere 67.4
Dentate gyrus
nTPM: 79.3
2010 Male, age 76, both hemispheres 110.9
1927 Female, age 91, both hemispheres 92.7
2530 Female, age 94, left hemisphere 92.0
2246 Female, age 85, both hemispheres 72.5
2528 Male, age 74, both hemispheres 53.9
2531 Female, age 67, both hemispheres 53.9
Entorhinal gyrus
nTPM: 60.0
2764 Male, age 80, right hemisphere 70.1
1938 Female, age 85, left hemisphere 69.5
1787 Male, age 76, left hemisphere 65.8
2117 Female, age 91, right hemisphere 57.5
2613 Female, age 94, left hemisphere 54.3
2686 Male, age 75, right hemisphere 43.2
Hippocampus, CA1
nTPM: 100.9
2749 Male, age 80, left hemisphere 202.8
1873 Female, age 85, both hemispheres 94.6
2045 Male, age 76, both hemispheres 74.7
2527 Male, age 74, both hemispheres 70.9
2082 Female, age 91, right hemisphere 61.8
Hippocampus, CA2
nTPM: 86.6
1963 Male, age 80, left hemisphere 136.5
1892 Male, age 76, both hemispheres 111.4
2249 Male, age 74, both hemispheres 76.1
2437 Female, age 94, left hemisphere 69.6
1940 Female, age 85, left hemisphere 65.3
2113 Female, age 91, right hemisphere 60.9
Hippocampus, CA3
nTPM: 88.7
2137 Male, age 80, left hemisphere 153.0
1867 Male, age 76, both hemispheres 107.9
2436 Male, age 74, both hemispheres 87.2
1891 Female, age 85, both hemispheres 63.1
2620 Female, age 94, left hemisphere 62.5
2861 Female, age 67, both hemispheres 58.7
Parahippocampal cortex
nTPM: 63.6
2245 Female, age 91, both hemispheres 82.0
1850 Male, age 80, both hemispheres 73.5
2018 Male, age 76, both hemispheres 72.5
2532 Female, age 72, left hemisphere 68.5
1933 Female, age 85, both hemispheres 68.0
2250 Female, age 67, right hemisphere 67.2
1990 Female, age 91, right hemisphere 65.2
2693 Female, age 94, both hemispheres 49.4
2622 Female, age 67, right hemisphere 45.0
2692 Male, age 74, both hemispheres 44.3
Perirhinal gyrus
nTPM: 72.0
1847 Female, age 91, left hemisphere 79.0
1794 Male, age 80, right hemisphere 78.6
2521 Female, age 94, right hemisphere 71.5
1841 Female, age 85, right hemisphere 71.4
2848 Male, age 76, right hemisphere 59.5
Subiculum
nTPM: 69.3
1901 Male, age 80, both hemispheres 84.7
2042 Male, age 76, both hemispheres 78.3
2438 Female, age 94, left hemisphere 74.0
1977 Female, age 85, both hemispheres 71.1
2619 Male, age 74, both hemispheres 55.8
2729 Female, age 91, right hemisphere 52.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 86.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 86.8
Samples: 197

Max nTPM: 204.6
Min nTPM: 36.6
Std nTPM: 32.1
Median nTPM: 79.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 204.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 191.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 176.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 170.1
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 169.5
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 167.6
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 162.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 159.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 154.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 151.0
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 148.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 147.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 147.3
FF:10169-103B7 60 years, female 201.4
FF:10153-102I9 76 years, female 93.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 102.0
Pig sample Sample description nTPM
Subiculum
nTPM: 72.7
Samples: 4

Max nTPM: 83.5
Min nTPM: 65.8
Sample A Female 83.5
Sample B Female 69.3
Sample C Male 72.2
Sample D Male 65.8
Dorsal hippocampus
nTPM: 102.0
Samples: 4

Max nTPM: 136.6
Min nTPM: 79.1
Sample A Female 136.6
Sample B Female 107.1
Sample C Male 85.2
Sample D Male 79.1
Entorhinal cortex
nTPM: 69.0
Samples: 4

Max nTPM: 75.2
Min nTPM: 59.7
Sample A Female 71.1
Sample B Female 75.2
Sample C Male 69.9
Sample D Male 59.7
Ventral hippocampus
nTPM: 89.3
Samples: 4

Max nTPM: 113.2
Min nTPM: 62.8
Sample A Female 87.1
Sample B Female 62.8
Sample C Male 94.0
Sample D Male 113.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 251.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 188.3
Samples: 4

Max nTPM: 203.7
Min nTPM: 179.7
Sample A Male 179.7
Sample B Male 181.8
Sample C Female 203.7
Sample D Female 187.9
Hippocampal formation
nTPM: 251.7
Samples: 4

Max nTPM: 269.4
Min nTPM: 243.6
Sample A Male 248.0
Sample B Male 243.6
Sample C Female 269.4
Sample D Female 245.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 9.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.3
68076540 Antisense, RP_040923_02_F01, Mouse strain C57BL/6J (56 days, male) 9.8
77280335 Antisense, RP_070116_01_B08, Mouse strain C57BL/6J (56 days, male) 8.7

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