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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:74.3 nTPM
HPA Brain:67.2 nTPM
GTEx:74.3 nTPM
FANTOM5:128.5 Scaled Tags Per Million
Pig:77.9 nTPM
Mouse:281.0 nTPM
Allen mouse:5.6 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA004334
Glial cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 62.2
2481 Female, age 94, left hemisphere 78.5
2288 Male, age 75, left hemisphere 74.2
2846 Female, age 79, unknown 66.4
2290 Female, age 72, unknown 61.7
1781 Male, age 74, unknown 59.2
1857 Female, age 85, left hemisphere 57.9
1854 Male, age 80, left hemisphere 53.0
2289 Male, age 61, right hemisphere 46.9
Globus pallidus, externus
nTPM: 54.3
2772 Female, age 79, unknown 68.4
2395 Male, age 75, both hemispheres 68.0
1996 Male, age 80, right hemisphere 59.0
2646 Male, age 61, right hemisphere 44.1
2567 Female, age 72, unknown 31.9
Globus pallidus, internus
nTPM: 59.2
2287 Male, age 75, right hemisphere 80.5
2483 Female, age 94, right hemisphere 77.8
2778 Female, age 91, both hemispheres 59.8
1818 Male, age 74, unknown 59.0
2111 Female, age 85, right hemisphere 47.9
2037 Male, age 80, right hemisphere 47.5
2566 Female, age 72, unknown 41.8
Nucleus accumbens
nTPM: 62.9
1856 Female, age 91, right hemisphere 70.8
2286 Male, age 75, left hemisphere 68.2
1806 Female, age 85, left hemisphere 65.9
2698 Female, age 72, unknown 65.3
2391 Female, age 94, left hemisphere 63.7
1783 Male, age 74, unknown 62.5
2824 Male, age 61, right hemisphere 57.7
2732 Male, age 80, right hemisphere 48.8
Nucleus basalis of Meynert
nTPM: 58.6
2484 Female, age 94, left hemisphere 67.6
2821 Male, age 75, both hemispheres 66.8
2393 Male, age 80, right hemisphere 54.7
2569 Male, age 61, both hemispheres 45.2
Nucleus of the diagonal band
nTPM: 67.2
1812 Female, age 91, both hemispheres 74.4
2775 Male, age 80, right hemisphere 74.4
2195 Female, age 85, both hemispheres 73.2
2029 Male, age 61, right hemisphere 58.1
1979 Male, age 74, unknown 55.9
Putamen
nTPM: 58.8
2482 Female, age 94, left hemisphere 75.5
2466 Female, age 79, unknown 67.3
1937 Female, age 91, right hemisphere 61.2
1829 Male, age 74, unknown 56.4
1838 Male, age 80, right hemisphere 55.8
2647 Male, age 75, left hemisphere 49.8
2489 Female, age 72, unknown 45.4
Septal nuclei
nTPM: 62.6
1960 Male, age 74, unknown 79.1
2031 Female, age 72, unknown 71.4
2009 Female, age 91, both hemispheres 63.2
2059 Female, age 85, both hemispheres 63.0
2629 Female, age 94, right hemisphere 59.1
2394 Male, age 61, left hemisphere 53.0
2199 Male, age 80, right hemisphere 49.0
Stria terminalis, bed nucleus
nTPM: 61.4
1974 Female, age 91, both hemispheres 73.0
2486 Female, age 94, both hemispheres 57.2
2201 Male, age 74, unknown 54.1

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 67.6
Samples: 246

Max nTPM: 111.6
Min nTPM: 44.2
Std nTPM: 11.4
Median nTPM: 67.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 111.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 101.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 101.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 96.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 95.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 94.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 94.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 94.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 92.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 92.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 91.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 90.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 90.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 89.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 88.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 88.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 87.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 85.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 85.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 84.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 84.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 84.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 84.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 83.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 83.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 82.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 82.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 81.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 81.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 80.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 80.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 80.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 80.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 79.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 79.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 78.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 78.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 78.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 77.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 77.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 77.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 76.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 76.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 76.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 76.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 76.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 75.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 75.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 75.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 75.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 75.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 75.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 75.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 75.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 75.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 74.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 74.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 74.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 73.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 73.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 73.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 73.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 72.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 72.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 72.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 72.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 72.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 72.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 72.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 72.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 71.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 71.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 71.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 71.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 71.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 71.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 71.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 71.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 71.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 70.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 70.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 70.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 70.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 70.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 70.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 70.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 70.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 70.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 70.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 70.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 70.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 70.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 70.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 69.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 69.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 69.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 69.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 69.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 68.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 68.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 68.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 68.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 68.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 68.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 68.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 68.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 68.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 68.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 68.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 68.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 68.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 68.0
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 67.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 67.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 67.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 67.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 67.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 67.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 67.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 67.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 67.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 67.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 67.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 67.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 66.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 66.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 66.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 66.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 66.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 66.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 66.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 66.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 66.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 65.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 65.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 65.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 65.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 65.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 65.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 65.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 65.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 65.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 65.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 65.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 65.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 65.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 65.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 64.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 64.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 64.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 64.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 64.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 64.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 63.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 63.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 63.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 63.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 63.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 63.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 62.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 62.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 62.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 62.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 62.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 62.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 61.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 61.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 61.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 61.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 61.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 61.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 61.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 61.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 61.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 61.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 61.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 61.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 60.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 60.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 60.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 60.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 60.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 60.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 59.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 59.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 59.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 59.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 59.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 59.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 58.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 58.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 58.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 58.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 58.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 58.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 58.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 57.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 57.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 57.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 57.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 57.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 57.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 57.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 57.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 57.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 57.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 56.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 56.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 56.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 56.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 56.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 55.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 55.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 55.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 55.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 55.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 54.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 53.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 53.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 53.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 53.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 53.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 53.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 53.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 52.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 52.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 52.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 51.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 51.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 51.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 51.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 50.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 50.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 50.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 49.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 49.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 49.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 49.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 49.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 48.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 48.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 48.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 47.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 47.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 46.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 44.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 73.5
Samples: 246

Max nTPM: 113.7
Min nTPM: 28.8
Std nTPM: 15.4
Median nTPM: 75.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 113.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 113.1
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 110.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 104.1
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 104.1
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 101.8
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 101.7
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 101.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 101.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 100.7
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 100.5
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 100.3
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 98.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 98.2
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 98.1
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 98.0
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 97.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 96.0
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 95.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 95.3
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 94.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 94.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 93.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 93.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 93.1
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 93.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 93.0
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 92.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 92.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 91.8
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 91.2
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 89.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 89.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 89.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 89.1
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 89.1
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 88.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 88.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 88.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 88.2
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 88.1
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 88.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 87.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 87.0
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 87.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 86.6
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 86.6
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 86.4
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 86.4
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 86.1
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 86.1
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 85.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 85.8
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 84.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 84.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 84.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 84.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 84.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 84.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 83.9
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 83.7
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 83.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 83.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 83.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 83.1
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 83.0
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 82.8
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 82.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 82.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 82.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 82.2
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 82.1
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 82.0
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 81.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 81.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 81.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 81.0
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 80.7
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 80.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 80.6
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 80.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 80.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 80.5
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 80.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 80.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 80.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 79.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 79.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 79.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 79.4
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 79.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 79.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 79.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 78.9
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 78.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 78.6
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 78.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 78.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 77.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 77.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 77.9
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 77.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 77.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 77.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 77.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 77.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 77.4
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 77.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 77.1
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 76.9
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 76.9
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 76.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 76.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 76.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 76.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 76.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 76.2
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 76.2
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 76.2
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 76.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 76.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 75.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 75.1
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 74.8
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 74.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 74.4
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 74.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 74.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 73.9
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 73.9
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 73.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 73.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 73.6
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 73.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 73.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 73.4
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 73.3
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 73.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 72.9
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 72.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 72.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 72.1
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 71.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 71.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 71.4
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 71.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 70.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 70.2
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 70.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 69.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 69.8
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 69.4
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 69.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 69.2
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 68.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 68.6
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 68.5
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 68.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 68.3
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 68.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 67.3
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 67.3
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 67.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 66.6
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 66.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 66.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 66.2
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 65.9
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 65.7
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 65.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 65.5
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 65.2
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 64.6
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 64.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 64.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 63.7
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 63.6
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 63.2
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 63.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 63.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 63.0
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 62.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 62.7
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 62.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 62.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 61.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 61.8
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 61.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 61.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 60.8
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 60.7
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 60.5
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 60.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 60.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 60.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 60.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 59.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 59.2
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 58.6
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 58.4
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 58.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 58.0
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 57.9
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 57.7
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 57.2
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 56.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 56.4
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 56.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 56.1
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 55.9
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 55.8
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 55.6
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 55.5
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 55.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 55.4
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 55.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 55.2
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 54.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 54.3
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 54.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 53.8
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 53.2
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 53.1
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 53.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 52.9
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 52.9
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 52.1
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 51.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 51.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 50.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 48.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 48.8
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 48.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 47.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 45.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 44.7
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 44.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 43.9
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 43.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 42.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 42.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 42.0
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 40.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 39.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 37.0
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 28.8
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Brain - Putamen (basal ganglia)
Average nTPM: 74.3
Samples: 205

Max nTPM: 133.2
Min nTPM: 48.2
Std nTPM: 11.9
Median nTPM: 74.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 133.2
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 109.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 102.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 100.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 99.8
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 99.1
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 98.7
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 97.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 97.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 96.4
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 94.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 93.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 92.5
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 92.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 92.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 90.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 90.1
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 89.7
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 88.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 88.7
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 88.6
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 88.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 88.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 87.8
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 87.7
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 87.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 87.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 86.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 86.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 86.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 86.6
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 86.5
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 86.3
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 86.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 85.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 85.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 85.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 84.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 84.5
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 84.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 83.5
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 83.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 83.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 83.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 83.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 82.8
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 82.4
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 82.0
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 82.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 81.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 81.4
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 81.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 81.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 81.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 80.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 80.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 80.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 80.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 80.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 79.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 79.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 79.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 78.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 78.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 78.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 78.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 77.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 77.9
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 77.7
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 77.7
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 77.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 77.5
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 77.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 77.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 77.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 77.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 77.2
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 77.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 77.2
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 77.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 77.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 77.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 76.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 76.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 76.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 76.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 76.2
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 76.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 76.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 76.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 75.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 75.7
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 75.5
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 75.4
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 75.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 75.2
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 75.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 74.6
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 74.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 74.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 74.3
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 74.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 74.0
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 73.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 73.7
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 73.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 73.1
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 72.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 72.5
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 72.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 72.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 72.2
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 72.1
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 71.9
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 71.8
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 71.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 71.3
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 71.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 71.0
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 70.9
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 70.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 70.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 70.5
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 70.1
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 70.0
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 70.0
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 69.9
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 69.8
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 69.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 69.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 69.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 69.4
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 69.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 69.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 69.0
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 68.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 68.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 68.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 68.8
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 68.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 68.5
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 68.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 67.8
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 67.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 67.4
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 67.2
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 67.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 67.1
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 67.0
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 66.7
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 66.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 66.4
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 66.3
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 66.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 66.2
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 66.1
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 65.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 65.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 65.6
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 65.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 65.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 65.2
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 65.1
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 64.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 64.4
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 64.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 64.3
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 64.2
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 64.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 63.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 63.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 63.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 62.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 62.3
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 61.9
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 61.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 61.4
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 61.2
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 61.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 60.6
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 60.5
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 60.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 60.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 59.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 59.4
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 58.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 58.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 58.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 57.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 57.4
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 57.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 57.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 57.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 57.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 57.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 57.0
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 56.2
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 55.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 55.3
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 55.2
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 54.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 51.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 51.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 48.3
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 48.2
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

128.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 98.1
FF:10164-103B2 76 years, female 98.1
Nucleus accumbens
Scaled Tags Per Million: 124.8
FF:10037-101F1 23-56 years, mixed 124.8
Putamen
Scaled Tags Per Million: 128.5
FF:10176-103C5 60 years, female 128.5
Globus pallidus
Scaled Tags Per Million: 96.5
FF:10175-103C4 60 years, female 117.7
FF:10161-103A8 76 years, female 75.3

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

77.9
Pig sample Sample description nTPM
Caudate
nTPM: 68.5
Samples: 4

Max nTPM: 77.4
Min nTPM: 63.9
Sample A Female 63.9
Sample B Female 68.1
Sample C Male 77.4
Sample D Male 64.6
Putamen
nTPM: 77.9
Samples: 4

Max nTPM: 95.2
Min nTPM: 63.6
Sample A Female 71.1
Sample B Female 63.6
Sample C Male 95.2
Sample D Male 81.7
Septum
nTPM: 75.7
Samples: 4

Max nTPM: 81.6
Min nTPM: 65.2
Sample A Female 78.8
Sample B Female 65.2
Sample C Male 77.0
Sample D Male 81.6
Ventral pallidum
nTPM: 73.7
Samples: 4

Max nTPM: 82.1
Min nTPM: 67.0
Sample A Female 67.0
Sample B Female 74.7
Sample C Male 82.1
Sample D Male 71.1

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

281.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 281.0
Samples: 4

Max nTPM: 288.5
Min nTPM: 270.5
Sample A Male 288.5
Sample B Male 285.7
Sample C Female 270.5
Sample D Female 279.2
Septum
nTPM: 226.2
Samples: 4

Max nTPM: 247.3
Min nTPM: 210.1
Sample A Male 210.1
Sample B Male 247.3
Sample C Female 231.7
Sample D Female 215.7
Ventral forebrain
nTPM: 234.6
Samples: 4

Max nTPM: 253.9
Min nTPM: 216.9
Sample A Male 231.6
Sample B Male 216.9
Sample C Female 253.9
Sample D Female 236.0

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

5.6
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 5.6
77280335 Antisense, RP_070116_01_B08, Mouse strain C57BL/6J (56 days, male) 5.9
68076540 Antisense, RP_040923_02_F01, Mouse strain C57BL/6J (56 days, male) 5.4
Pallidum
Expression energy: 3.7
68076540 Antisense, RP_040923_02_F01, Mouse strain C57BL/6J (56 days, male) 4.1
77280335 Antisense, RP_070116_01_B08, Mouse strain C57BL/6J (56 days, male) 3.3

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