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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
531.6
nTPM
FANTOM5:
1222.8
Scaled Tags Per Million
Allen mouse:
8.2
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
531.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 531.6
2090
Male, age 80, both hemispheres
685.9
2188
Female, age 91, both hemispheres
556.4
2301
Female, age 85, both hemispheres
510.6
1984
Male, age 76, both hemispheres
373.5
Dorsal cochlear nucleus nTPM: 398.1
2187
Female, age 91, both hemispheres
625.8
2378
Male, age 80, both hemispheres
456.7
2058
Male, age 76, both hemispheres
342.5
2370
Male, age 61, both hemispheres
287.3
2802
Male, age 74, right hemisphere
278.0
Dorsal tegmental nucleus nTPM: 389.0
2083
Male, age 80, both hemispheres
589.3
2326
Male, age 74, both hemispheres
410.4
1936
Male, age 76, left hemisphere
324.3
2358
Male, age 61, both hemispheres
231.8
Dorsolateral tegmental area nTPM: 473.8
2751
Female, age 85, both hemispheres
724.7
2654
Male, age 80, both hemispheres
583.0
2337
Male, age 61, both hemispheres
563.6
2360
Male, age 74, both hemispheres
288.9
2141
Male, age 76, both hemispheres
209.1
Kolliker-Fuse nucleus nTPM: 433.1
2793
Female, age 91, left hemisphere
452.6
2315
Male, age 76, right hemisphere
439.5
2163
Male, age 80, both hemispheres
407.3
Lateral lemniscal nuclei nTPM: 375.0
2746
Female, age 85, left hemisphere
410.5
2320
Female, age 91, left hemisphere
410.2
2036
Male, age 80, both hemispheres
365.9
2453
Male, age 74, right hemisphere
356.7
2169
Male, age 76, both hemispheres
331.7
Lateral parabrachial nucleus nTPM: 424.7
2792
Male, age 76, both hemispheres
571.1
2013
Male, age 80, both hemispheres
498.3
2139
Female, age 85, right hemisphere
347.1
2790
Male, age 61, both hemispheres
282.3
Lateral vestibular nucleus nTPM: 472.9
2311
Male, age 80, both hemispheres
614.3
2184
Male, age 76, both hemispheres
331.6
Locus coeruleus nTPM: 198.5
2162
Male, age 80, both hemispheres
272.2
2123
Female, age 91, both hemispheres
218.7
2317
Female, age 72, unknown
210.0
2720
Male, age 74, both hemispheres
196.2
2788
Male, age 74, unknown
182.6
2014
Male, age 55, unknown
169.5
1980
Male, age 76, both hemispheres
140.2
Medial parabrachial nucleus nTPM: 508.5
2170
Female, age 91, both hemispheres
793.7
2463
Female, age 85, right hemisphere
605.6
2854
Male, age 80, both hemispheres
503.7
2786
Male, age 76, both hemispheres
387.2
2156
Male, age 61, both hemispheres
252.4
Medial periolivary nuclei nTPM: 439.1
2081
Male, age 80, both hemispheres
601.8
2791
Male, age 74, right hemisphere
479.2
2458
Female, age 91, both hemispheres
466.4
2063
Male, age 76, both hemispheres
396.6
2171
Female, age 85, both hemispheres
251.7
Motor facial nucleus nTPM: 402.9
2126
Male, age 61, both hemispheres
588.8
2365
Male, age 74, right hemisphere
536.2
2795
Female, age 91, both hemispheres
367.6
2697
Female, age 85, both hemispheres
351.6
2062
Male, age 76, both hemispheres
306.2
2327
Male, age 80, both hemispheres
267.4
Motor trigeminal nucleus nTPM: 381.6
2560
Male, age 74, both hemispheres
471.9
2321
Female, age 91, both hemispheres
441.0
2309
Male, age 76, both hemispheres
355.3
2079
Male, age 80, both hemispheres
326.2
2335
Male, age 61, both hemispheres
313.8
Nuclei of the trapezoid body nTPM: 345.9
2368
Female, age 91, both hemispheres
436.9
2166
Male, age 80, both hemispheres
429.1
1983
Male, age 76, both hemispheres
332.1
2159
Male, age 61, both hemispheres
311.6
2735
Female, age 85, both hemispheres
219.5
Nucleus raphe magnus nTPM: 348.7
2459
Female, age 91, both hemispheres
539.7
2051
Male, age 76, both hemispheres
456.8
2328
Male, age 80, both hemispheres
381.5
2455
Male, age 74, both hemispheres
336.7
2160
Male, age 61, both hemispheres
217.1
2172
Female, age 85, both hemispheres
160.5
Paramedian reticular nucleus nTPM: 473.3
2052
Male, age 76, both hemispheres
616.5
2057
Male, age 80, both hemispheres
594.8
2050
Female, age 85, both hemispheres
398.5
2313
Male, age 61, both hemispheres
283.6
Pedunculopontine tegmental nucleus nTPM: 390.6
2338
Male, age 61, both hemispheres
491.9
2334
Male, age 80, both hemispheres
412.0
1921
Female, age 85, both hemispheres
267.8
Pontine nuclei nTPM: 432.7
2454
Male, age 74, left hemisphere
704.4
2109
Female, age 72, unknown
553.0
2319
Female, age 91, both hemispheres
460.9
2115
Male, age 80, left hemisphere
436.8
1968
Male, age 76, left hemisphere
395.4
1863
Male, age 55, unknown
378.2
2727
Male, age 61, right hemisphere
330.9
2787
Female, age 85, both hemispheres
201.7
Pontine raphe nucleus nTPM: 267.3
2853
Male, age 76, midline
274.5
2122
Female, age 85, midline
260.1
Posteroventral cochlear nucleus nTPM: 501.2
2341
Male, age 80, both hemispheres
810.2
2135
Female, age 91, both hemispheres
538.2
2070
Male, age 76, both hemispheres
484.6
2752
Female, age 85, both hemispheres
337.1
2371
Male, age 61, both hemispheres
335.9
Principal sensory trigeminal nucleus nTPM: 358.1
2367
Female, age 91, left hemisphere
534.2
2324
Male, age 76, both hemispheres
313.2
2008
Male, age 80, left hemisphere
308.2
2158
Male, age 61, both hemispheres
276.8
Reticular pontine nucleus, caudal nTPM: 482.3
2457
Female, age 91, both hemispheres
634.8
2559
Male, age 74, both hemispheres
530.9
2092
Male, age 76, both hemispheres
464.2
2332
Male, age 80, right hemisphere
299.2
Reticular pontine nucleus, oral nTPM: 518.4
2361
Male, age 74, both hemispheres
795.4
1939
Male, age 80, both hemispheres
506.1
2167
Male, age 76, both hemispheres
467.2
2366
Female, age 91, both hemispheres
415.1
2012
Female, age 85, both hemispheres
408.0
Reticulotegmental nucleus nTPM: 352.0
2322
Female, age 91, both hemispheres
473.5
2333
Male, age 80, both hemispheres
392.2
2452
Male, age 74, both hemispheres
322.2
2325
Male, age 76, both hemispheres
220.3
Spinal trigeminal nucleus, oral nTPM: 352.8
2164
Male, age 80, both hemispheres
437.4
1978
Male, age 76, both hemispheres
334.1
2737
Female, age 85, both hemispheres
286.8
Subcoeruleus area nTPM: 387.0
2369
Female, age 85, left hemisphere
769.8
1958
Male, age 80, both hemispheres
401.5
2089
Male, age 76, left hemisphere
321.1
2451
Male, age 74, both hemispheres
224.4
2323
Female, age 91, left hemisphere
218.3
Superior olive nTPM: 434.5
2364
Male, age 74, right hemisphere
585.0
2020
Male, age 76, both hemispheres
435.9
2329
Male, age 80, right hemisphere
431.6
2561
Female, age 91, both hemispheres
396.3
1875
Female, age 85, both hemispheres
323.9
Ventral periolivary nuclei nTPM: 320.7
2023
Male, age 76, both hemispheres
491.4
2165
Male, age 80, both hemispheres
372.0
2794
Female, age 91, left hemisphere
214.9
2130
Female, age 85, both hemispheres
204.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 458.1
2456
Female, age 91, both hemispheres
567.8
2359
Male, age 61, both hemispheres
526.1
2161
Male, age 80, both hemispheres
474.1
2449
Male, age 74, both hemispheres
436.6
2840
Female, age 85, both hemispheres
402.8
1959
Male, age 76, both hemispheres
340.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
