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POLR2J3
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BRAIN THALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Thalamus
THALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
HPA Brain:83.2 nTPM

THALAMUS - Annotated protein expression
Pending normal tissue analysis

THALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

83.2
Sample id Sample description nTPM
Anterior thalamic nucleus, ventral
nTPM: 76.6
2396 Male, age 61, right hemisphere 79.4
2497 Male, age 66, unknown 77.0
2032 Female, age 42, unknown 73.3
Centromedial thalamic nucleus
nTPM: 82.1
2279 Female, age 85, left hemisphere 94.1
2401 Male, age 76, right hemisphere 70.1
Habenula
nTPM: 64.7
2276 Male, age 66, unknown 73.1
2203 Male, age 61, left hemisphere 68.9
2252 Male, age 62, unknown 64.1
1957 Male, age 80, both hemispheres 52.5
Lateral geniculate body
nTPM: 62.2
2659 Male, age 66, unknown 80.3
2399 Male, age 61, left hemisphere 72.8
2841 Male, age 80, both hemispheres 69.7
2035 Female, age 72, unknown 63.8
2575 Female, age 94, right hemisphere 57.5
2857 Male, age 74, right hemisphere 53.6
1953 Male, age 62, unknown 52.1
2106 Female, age 67, right hemisphere 47.8
Lateral thalamic nuclei
nTPM: 66.9
2661 Female, age 72, unknown 75.3
2577 Male, age 74, both hemispheres 69.7
2573 Female, age 94, left hemisphere 67.3
1903 Male, age 76, left hemisphere 65.1
2765 Female, age 67, both hemispheres 57.3
Medial dorsal thalamic nucleus
nTPM: 62.5
2660 Female, age 72, unknown 89.0
2026 Male, age 62, unknown 70.9
2283 Male, age 80, right hemisphere 68.7
1930 Female, age 42, unknown 67.6
2402 Female, age 67, both hemispheres 65.0
1859 Male, age 76, both hemispheres 63.0
1971 Male, age 61, right hemisphere 62.4
2039 Female, age 72, unknown 61.4
2576 Male, age 74, both hemispheres 60.5
2492 Male, age 75, right hemisphere 59.2
2498 Male, age 66, unknown 57.7
1810 Male, age 48, unknown 54.1
2572 Female, age 94, right hemisphere 32.7
Medial geniculate body
nTPM: 67.3
2049 Male, age 76, both hemispheres 78.7
2217 Female, age 72, unknown 75.5
1811 Female, age 42, unknown 70.0
2657 Male, age 74, right hemisphere 65.9
2207 Male, age 80, right hemisphere 64.4
2571 Male, age 75, right hemisphere 60.8
2650 Female, age 94, left hemisphere 55.9
Nucleus reuniens
nTPM: 78.0
2210 Female, age 85, left hemisphere 89.2
2205 Male, age 80, left hemisphere 74.7
2212 Female, age 67, left hemisphere 70.1
Nucleus rhomboideus
nTPM: 73.2
2280 Female, age 85, left hemisphere 89.9
2213 Female, age 67, left hemisphere 75.0
2206 Male, age 80, both hemispheres 54.9
Posterior thalamic nucleus
nTPM: 53.6
2495 Female, age 67, right hemisphere 69.6
2266 Male, age 76, right hemisphere 64.7
2655 Male, age 74, right hemisphere 53.7
2649 Female, age 94, both hemispheres 26.5
Pulvinar
nTPM: 64.0
2582 Female, age 72, unknown 79.9
2214 Male, age 76, right hemisphere 78.8
2398 Male, age 61, left hemisphere 67.5
1899 Female, age 42, unknown 65.8
2724 Male, age 74, right hemisphere 65.7
2496 Female, age 67, right hemisphere 61.8
1929 Male, age 48, unknown 58.0
1972 Male, age 62, unknown 57.6
2499 Male, age 66, unknown 54.2
1932 Male, age 80, right hemisphere 50.9
Subthalamic nucleus
nTPM: 73.1
2216 Male, age 48, unknown 99.1
2779 Female, age 42, unknown 83.5
2406 Female, age 72, unknown 73.7
2658 Male, age 74, both hemispheres 67.6
2056 Female, age 72, unknown 67.0
2282 Male, age 61, both hemispheres 66.5
2275 Male, age 66, unknown 63.9
2124 Male, age 62, unknown 63.6
Ventral posterolateral thalamic nucleus
nTPM: 70.1
2581 Female, age 72, unknown 86.4
2397 Male, age 61, right hemisphere 81.2
2578 Male, age 74, both hemispheres 73.7
2740 Male, age 76, right hemisphere 62.0
2570 Male, age 75, right hemisphere 59.4
2197 Male, age 80, both hemispheres 57.9
Ventral posteromedial thalamic nucleus
nTPM: 65.4
2127 Male, age 76, right hemisphere 86.5
2653 Male, age 74, both hemispheres 67.4
2758 Male, age 80, both hemispheres 64.0
2202 Male, age 61, left hemisphere 62.3
2281 Male, age 75, right hemisphere 46.7
Ventral thalamic nuclei
nTPM: 70.6
2652 Male, age 74, left hemisphere 83.3
2858 Female, age 72, unknown 80.9
2204 Male, age 80, both hemispheres 77.1
2285 Male, age 62, unknown 70.5
2291 Female, age 72, unknown 67.6
1912 Female, age 42, unknown 66.0
2580 Male, age 66, unknown 64.0
1845 Male, age 48, unknown 63.2
1860 Male, age 76, both hemispheres 62.5
Zona incerta
nTPM: 83.2
2663 Female, age 72, unknown 105.6
2403 Male, age 62, unknown 86.6
2215 Male, age 66, unknown 79.6
2208 Male, age 80, right hemisphere 79.1
2822 Male, age 74, right hemisphere 64.9

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