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ATP1A2
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BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: Medium
Granular cells - nucleus: Not detected
Molecular layer - neuropil: High
Molecular layer cells - cytoplasm/membrane: Low
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Medium
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: High
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: Not detected
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:174.1 nTPM
HPA Brain:614.1 nTPM
GTEx:174.1 nTPM
FANTOM5:640.6 Scaled Tags Per Million
Pig:182.6 nTPM
Mouse:272.0 nTPM
Allen mouse:10.9 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB022230
Bergmann glia - cytoplasm/membrane Not detected
Bergmann glia - nucleus Not detected
GLUC cells - cytoplasm/membrane Not detected
GLUC cells - nucleus Not detected
Purkinje cells - cytoplasm/membrane Not detected
Purkinje cells - dendrites Not detected
Purkinje cells - nucleus Not detected
Granular cells - cytoplasm/membrane Medium
Granular cells - nucleus Not detected
Molecular layer - neuropil High
Molecular layer cells - cytoplasm/membrane Low
Molecular layer cells - nucleus Not detected
Processes in granular layer Not detected
Processes in molecular layer Not detected
Processes in white matter Medium
Synaptic glomeruli - capsule High
Synaptic glomeruli - core Not detected
White matter cells - cytoplasm/membrane Not detected
White matter cells - nucleus Not detected



CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

614.1
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 368.8
2003 Female, age 85, right hemisphere 555.4
2006 Male, age 61, right hemisphere 398.0
1769 Male, age 76, right hemisphere 393.7
2055 Female, age 91, right hemisphere 390.5
1774 Male, age 80, left hemisphere 327.0
1768 Female, age 72, unknown 321.0
2101 Male, age 74, right hemisphere 307.7
1788 Male, age 55, unknown 257.1
Cerebellar nuclei
nTPM: 614.1
2177 Female, age 85, both hemispheres 886.6
1966 Female, age 91, left hemisphere 753.0
2882 Male, age 76, left hemisphere 748.4
2783 Female, age 72, unknown 728.1
2005 Male, age 80, left hemisphere 688.3
2175 Male, age 61, right hemisphere 676.2
1871 Male, age 74, unknown 447.6
1879 Male, age 55, unknown 353.1
2318 Male, age 74, left hemisphere 245.5
Flocculonodular lobe
nTPM: 294.8
1765 Male, age 55, unknown 377.0
1792 Male, age 74, unknown 375.3
2176 Female, age 91, right hemisphere 325.0
1767 Male, age 76, left hemisphere 322.3
1835 Female, age 85, right hemisphere 274.3
1771 Male, age 80, left hemisphere 240.3
2004 Male, age 61, right hemisphere 149.4
Vermis
nTPM: 305.7
1778 Female, age 91, left hemisphere 426.8
1751 Male, age 74, right hemisphere 381.5
1825 Male, age 74, unknown 357.7
2834 Male, age 80, left hemisphere 356.8
1770 Male, age 76, left hemisphere 330.8
1766 Male, age 55, unknown 299.2
1928 Female, age 72, unknown 266.0
1988 Female, age 85, left hemisphere 169.9
2460 Male, age 61, both hemispheres 162.7

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

174.1
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 99.7
Samples: 215

Max nTPM: 477.4
Min nTPM: 19.7
Std nTPM: 67.4
Median nTPM: 86.0
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 477.4
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 434.3
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 383.4
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 311.9
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 289.3
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 286.2
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 281.4
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 261.9
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 253.9
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 224.5
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 223.4
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 218.7
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 212.4
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 197.5
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 194.5
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 188.9
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 187.2
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 186.6
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 184.4
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 178.0
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 168.9
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 168.5
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 167.9
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 166.3
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 165.8
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 165.0
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 164.4
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 158.2
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 150.9
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 150.9
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 149.8
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 149.8
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 147.7
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 146.2
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 145.8
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 145.1
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 141.3
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 139.0
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 138.8
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 137.9
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 136.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 134.6
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 134.1
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 133.7
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 133.3
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 131.2
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 129.0
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 128.0
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 127.9
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 127.7
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 127.6
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 126.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 125.7
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 123.9
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 123.2
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 122.9
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 122.4
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 120.3
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 119.7
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 117.4
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 117.4
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 117.3
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 116.7
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 116.6
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 115.9
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 114.2
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 114.1
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 112.0
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 111.4
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 110.9
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 110.4
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 110.3
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 109.7
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 107.5
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 106.9
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 105.8
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 105.2
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 103.5
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 101.5
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 100.5
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 99.8
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 99.3
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 99.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 98.7
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 98.6
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 98.4
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 98.4
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 98.2
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 97.8
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 95.2
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 94.9
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 94.8
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 93.9
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 93.8
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 92.8
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 92.4
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 92.3
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 92.1
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 91.5
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 91.1
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 89.9
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 89.8
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 89.8
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 88.4
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 87.4
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 87.2
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 86.8
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 86.0
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 83.6
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 83.1
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 82.7
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 82.5
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 81.5
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 81.3
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 80.4
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 79.4
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 79.4
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 79.0
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 79.0
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 78.8
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 78.5
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 77.8
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 77.1
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 75.4
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 74.7
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 74.2
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 73.0
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 72.6
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 71.8
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 71.7
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 71.6
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 71.4
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 71.1
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 71.0
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 69.2
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 68.4
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 68.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 67.9
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 67.5
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 66.5
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 65.8
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 65.7
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 65.0
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 64.6
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 64.2
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 63.6
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 62.4
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 60.6
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 60.4
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 58.9
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 57.9
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 57.9
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 57.1
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 56.5
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 56.5
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 56.2
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 56.0
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 55.5
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 54.2
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 53.3
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 52.8
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 52.7
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 52.1
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 51.9
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 51.8
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 51.5
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 51.0
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 50.9
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 50.7
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 50.3
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 50.3
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 49.7
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 48.8
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 48.5
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 48.4
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 48.1
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 48.0
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 46.9
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 46.4
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 46.0
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 45.7
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 44.9
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 44.4
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 43.4
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 42.4
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 42.2
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 42.0
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 41.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 41.2
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 39.3
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 39.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 37.5
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 37.4
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 36.9
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 36.4
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 36.1
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 35.4
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 35.1
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 34.7
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 34.4
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 33.5
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 33.1
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 33.0
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 32.6
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 32.2
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 32.2
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 31.9
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 29.7
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 29.2
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 27.4
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 26.7
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 25.4
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 25.1
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 24.6
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 19.7
Show allShow less
Brain - Cerebellum
Average nTPM: 174.1
Samples: 241

Max nTPM: 651.8
Min nTPM: 26.9
Std nTPM: 84.2
Median nTPM: 161.1
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 651.8
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 573.1
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 504.4
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 351.6
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 348.6
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 345.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 343.7
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 343.5
GTEX-RU72-2926-SM-2TF66 50-59 years, female 341.9
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 332.4
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 330.9
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 325.8
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 322.6
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 322.6
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 315.4
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 314.3
GTEX-11ONC-3026-SM-5985W 60-69 years, male 304.8
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 302.9
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 302.8
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 292.3
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 286.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 281.7
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 278.2
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 277.5
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 275.8
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 275.7
GTEX-144GL-2926-SM-5O99F 50-59 years, male 269.7
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 263.0
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 262.9
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 259.3
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 256.8
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 253.7
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 253.5
GTEX-17HII-2926-SM-79OMK 50-59 years, male 248.9
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 247.5
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 247.5
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 241.2
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 240.7
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 240.1
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 240.0
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 239.5
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 238.1
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 232.4
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 232.0
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 229.3
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 229.1
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 228.2
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 226.5
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 225.9
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 225.8
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 223.5
GTEX-12126-0926-SM-5FQTW 20-29 years, male 222.5
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 222.0
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 222.0
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 221.5
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 219.2
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 219.1
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 218.8
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 217.8
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 217.4
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 216.5
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 215.7
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 215.6
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 214.0
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 213.5
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 212.5
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 212.4
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 211.4
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 209.3
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 207.4
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 206.1
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 203.4
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 198.8
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 198.0
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 197.3
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 197.3
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 197.1
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 196.8
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 195.3
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 194.7
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 193.3
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 193.2
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 192.9
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 191.4
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 189.8
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 187.8
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 187.5
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 186.6
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 186.0
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 184.9
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 184.4
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 184.2
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 182.7
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 180.9
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 179.9
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 179.3
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 177.7
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 177.1
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 177.0
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 175.7
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 175.7
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 175.7
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 174.8
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 174.3
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 173.8
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 173.1
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 172.2
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 171.6
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 170.4
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 169.8
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 169.7
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 169.4
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 169.3
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 169.0
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 166.8
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 165.9
GTEX-11EI6-2926-SM-5985U 60-69 years, male 165.8
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 165.7
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 163.0
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 161.8
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 161.1
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 160.0
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 159.1
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 159.0
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 158.6
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 158.4
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 157.3
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 156.8
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 156.1
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 155.7
GTEX-15G19-2826-SM-6M48K 60-69 years, male 154.9
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 154.7
GTEX-13112-2926-SM-5DUWT 50-59 years, male 153.7
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 152.5
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 152.4
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 152.2
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 150.9
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 150.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 150.4
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 150.1
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 149.2
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 149.2
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 149.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 148.1
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 147.8
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 147.8
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 147.2
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 147.0
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 146.8
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 146.2
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 146.1
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 144.6
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 139.6
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 138.8
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 137.8
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 136.8
GTEX-11DYG-2926-SM-5H132 60-69 years, male 136.7
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 134.6
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 134.3
GTEX-18465-2926-SM-7KFSE 50-59 years, male 133.9
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 133.6
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 133.6
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 133.4
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 133.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 133.2
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 132.3
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 131.5
GTEX-145LS-3026-SM-5O99S 60-69 years, female 131.2
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 130.2
GTEX-1B933-3026-SM-731DB 50-59 years, female 130.1
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 129.1
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 128.7
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 128.4
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 126.9
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 126.8
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 126.4
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 126.2
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 125.9
GTEX-X261-3126-SM-4PQZC 50-59 years, male 125.2
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 124.6
GTEX-1192X-3226-SM-5987D 50-59 years, male 123.7
GTEX-11NUK-3026-SM-5986K 50-59 years, male 123.6
GTEX-14PN4-3026-SM-664O4 50-59 years, male 123.4
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 123.4
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 122.0
GTEX-17EVP-2926-SM-793BU 40-49 years, male 119.8
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 118.6
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 118.2
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 114.4
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 113.0
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 111.7
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 110.3
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 110.2
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 108.9
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 108.8
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 108.1
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 105.9
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 105.2
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 103.7
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 101.4
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 100.5
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 99.4
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 97.9
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 96.0
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 96.0
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 95.5
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 95.5
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 94.0
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 93.9
GTEX-14ABY-3026-SM-664NE 50-59 years, male 88.2
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 88.1
GTEX-14E6D-2926-SM-664OP 50-59 years, male 88.1
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 86.3
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 84.3
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 84.2
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 81.7
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 80.9
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 79.4
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 79.3
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 77.1
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 75.3
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 70.0
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 67.6
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 65.8
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 65.4
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 65.3
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 62.4
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 61.5
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 60.8
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 60.4
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 59.1
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 56.1
GTEX-WL46-2826-SM-3LK81 50-59 years, male 54.1
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 50.7
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 49.0
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 48.4
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 46.4
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 44.5
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 37.4
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 36.2
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 26.9
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CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

640.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 640.6
FF:10166-103B4 76 years, female 683.6
FF:10083-102B2 22-68 years, mixed 597.6

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

182.6
Pig sample Sample description nTPM
Cerebellum
nTPM: 182.6
Samples: 4

Max nTPM: 296.5
Min nTPM: 129.7
Sample A Female 296.5
Sample B Female 156.1
Sample C Male 129.7
Sample D Male 148.0

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

272.0
Mouse sample Sample description nTPM
Cerebellum
nTPM: 272.0
Samples: 4

Max nTPM: 291.2
Min nTPM: 262.5
Sample A Male 270.0
Sample B Male 264.2
Sample C Female 291.2
Sample D Female 262.5

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.9
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 10.9
69173256 Antisense, RP_050329_01_C04, Mouse strain C57BL/6J (56 days, male) 10.9

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