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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:500.0 nTPM
HPA Brain:283.7 nTPM
GTEx:500.0 nTPM
FANTOM5:425.4 Scaled Tags Per Million
Pig:227.2 nTPM
Mouse:49.2 nTPM
Allen mouse:1.9 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001762Antibody CAB000080Antibody CAB058687
Glial cells MediumMediumMedium
Neuronal cells LowNot detectedLow







BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

283.7
Sample id Sample description nTPM
Caudate nucleus
nTPM: 283.7
2481 Female, age 94, left hemisphere 380.2
1857 Female, age 85, left hemisphere 364.6
2290 Female, age 72, unknown 352.4
2289 Male, age 61, right hemisphere 307.7
1854 Male, age 80, left hemisphere 285.6
2846 Female, age 79, unknown 217.8
2288 Male, age 75, left hemisphere 184.2
1781 Male, age 74, unknown 176.9
Globus pallidus, externus
nTPM: 154.2
2395 Male, age 75, both hemispheres 252.5
1996 Male, age 80, right hemisphere 175.8
2772 Female, age 79, unknown 131.4
2646 Male, age 61, right hemisphere 112.2
2567 Female, age 72, unknown 99.0
Globus pallidus, internus
nTPM: 132.3
2483 Female, age 94, right hemisphere 230.0
2566 Female, age 72, unknown 136.8
2037 Male, age 80, right hemisphere 130.8
2111 Female, age 85, right hemisphere 125.0
2778 Female, age 91, both hemispheres 111.3
2287 Male, age 75, right hemisphere 105.0
1818 Male, age 74, unknown 87.5
Nucleus accumbens
nTPM: 226.1
2732 Male, age 80, right hemisphere 370.6
1806 Female, age 85, left hemisphere 292.4
2698 Female, age 72, unknown 251.6
2286 Male, age 75, left hemisphere 231.1
2391 Female, age 94, left hemisphere 204.3
1783 Male, age 74, unknown 197.9
2824 Male, age 61, right hemisphere 141.0
1856 Female, age 91, right hemisphere 120.3
Nucleus basalis of Meynert
nTPM: 206.0
2393 Male, age 80, right hemisphere 252.7
2821 Male, age 75, both hemispheres 232.7
2484 Female, age 94, left hemisphere 177.1
2569 Male, age 61, both hemispheres 161.7
Nucleus of the diagonal band
nTPM: 142.5
1812 Female, age 91, both hemispheres 199.3
1979 Male, age 74, unknown 160.6
2195 Female, age 85, both hemispheres 133.7
2775 Male, age 80, right hemisphere 118.3
2029 Male, age 61, right hemisphere 100.6
Putamen
nTPM: 193.1
2482 Female, age 94, left hemisphere 293.7
2489 Female, age 72, unknown 245.2
1838 Male, age 80, right hemisphere 181.9
2647 Male, age 75, left hemisphere 172.4
1937 Female, age 91, right hemisphere 167.9
1829 Male, age 74, unknown 150.4
2466 Female, age 79, unknown 140.5
Septal nuclei
nTPM: 199.7
2199 Male, age 80, right hemisphere 232.4
2059 Female, age 85, both hemispheres 227.5
2629 Female, age 94, right hemisphere 213.2
2031 Female, age 72, unknown 198.5
2394 Male, age 61, left hemisphere 185.5
2009 Female, age 91, both hemispheres 173.9
1960 Male, age 74, unknown 166.6
Stria terminalis, bed nucleus
nTPM: 90.3
2486 Female, age 94, both hemispheres 114.2
1974 Female, age 91, both hemispheres 112.2
2201 Male, age 74, unknown 44.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

500.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 500.0
Samples: 246

Max nTPM: 4641.1
Min nTPM: 83.9
Std nTPM: 370.5
Median nTPM: 420.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 4641.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1693.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 1681.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1636.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1407.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1361.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1343.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 1228.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1140.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1123.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1086.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 1032.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1015.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 907.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 869.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 849.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 847.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 837.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 835.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 832.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 829.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 823.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 816.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 810.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 800.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 789.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 776.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 773.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 769.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 766.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 761.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 755.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 745.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 718.5
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 705.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 699.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 698.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 684.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 674.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 671.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 664.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 659.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 656.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 637.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 634.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 634.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 632.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 625.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 623.3
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 620.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 620.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 617.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 613.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 611.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 611.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 609.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 608.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 607.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 599.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 599.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 598.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 595.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 576.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 573.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 572.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 567.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 566.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 565.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 564.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 563.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 560.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 559.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 558.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 555.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 554.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 553.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 541.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 538.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 529.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 528.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 527.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 526.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 524.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 521.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 518.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 518.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 515.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 514.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 511.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 508.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 507.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 498.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 496.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 493.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 493.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 487.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 483.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 483.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 480.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 480.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 477.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 469.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 469.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 467.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 461.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 456.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 454.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 451.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 450.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 447.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 442.7
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 442.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 441.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 439.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 434.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 434.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 434.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 432.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 430.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 429.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 428.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 426.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 420.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 420.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 415.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 412.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 412.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 410.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 410.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 402.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 401.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 400.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 395.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 394.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 393.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 390.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 388.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 388.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 388.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 388.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 387.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 384.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 383.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 382.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 381.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 377.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 375.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 371.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 369.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 369.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 367.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 367.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 366.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 364.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 363.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 362.5
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 361.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 360.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 352.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 350.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 350.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 349.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 348.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 346.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 345.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 343.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 343.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 343.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 342.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 341.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 339.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 337.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 331.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 328.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 328.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 325.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 324.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 323.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 323.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 319.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 319.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 318.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 315.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 314.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 311.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 309.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 309.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 306.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 304.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 303.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 303.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 302.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 296.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 293.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 293.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 293.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 292.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 291.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 288.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 288.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 286.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 283.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 282.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 277.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 275.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 272.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 271.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 271.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 269.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 269.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 269.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 267.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 264.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 262.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 261.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 257.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 256.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 255.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 254.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 245.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 245.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 238.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 238.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 231.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 226.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 226.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 226.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 224.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 224.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 218.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 215.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 214.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 214.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 214.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 205.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 204.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 204.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 195.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 189.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 189.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 184.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 170.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 167.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 108.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 101.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 83.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 391.2
Samples: 246

Max nTPM: 3557.5
Min nTPM: 78.2
Std nTPM: 344.2
Median nTPM: 307.3
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 3557.5
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 3007.4
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 1866.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 1096.5
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 1036.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 1022.5
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 969.3
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 960.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 911.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 908.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 890.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 883.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 882.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 856.2
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 805.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 752.1
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 746.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 743.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 741.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 707.3
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 694.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 692.9
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 684.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 676.3
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 671.5
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 657.2
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 655.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 654.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 647.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 644.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 639.6
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 630.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 629.8
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 618.6
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 610.7
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 596.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 588.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 587.3
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 583.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 582.2
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 581.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 556.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 546.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 543.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 541.3
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 531.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 525.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 522.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 511.5
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 509.4
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 507.2
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 491.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 490.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 484.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 481.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 476.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 475.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 469.4
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 469.2
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 466.7
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 459.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 453.3
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 452.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 439.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 434.9
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 432.1
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 426.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 423.8
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 417.4
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 414.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 413.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 411.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 403.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 401.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 400.8
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 400.0
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 398.8
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 398.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 397.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 395.7
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 394.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 392.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 392.6
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 382.2
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 381.2
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 380.5
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 378.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 377.7
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 376.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 373.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 373.4
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 373.0
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 371.8
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 370.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 369.3
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 368.7
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 367.6
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 362.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 361.0
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 360.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 348.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 347.5
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 344.9
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 344.5
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 338.6
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 335.0
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 330.8
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 329.0
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 328.9
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 328.4
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 327.2
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 323.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 320.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 319.2
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 318.6
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 318.2
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 317.6
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 317.3
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 310.3
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 310.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 309.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 308.6
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 307.5
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 307.1
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 305.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 304.8
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 304.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 304.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 301.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 300.6
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 300.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 300.4
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 299.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 298.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 297.5
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 296.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 295.9
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 295.2
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 292.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 291.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 288.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 287.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 285.3
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 284.8
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 284.5
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 283.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 280.7
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 280.4
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 278.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 278.3
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 269.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 263.0
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 262.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 261.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 261.6
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 261.6
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 256.2
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 254.2
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 253.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 252.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 250.0
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 250.0
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 250.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 249.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 248.9
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 248.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 248.3
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 247.7
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 246.9
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 244.2
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 242.7
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 242.3
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 240.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 237.1
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 234.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 233.9
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 232.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 227.8
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 226.0
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 222.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 221.3
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 220.1
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 219.6
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 219.1
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 212.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 211.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 211.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 211.2
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 211.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 210.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 209.1
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 205.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 203.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 202.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 201.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 200.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 199.9
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 199.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 199.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 197.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 196.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 193.5
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 192.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 192.4
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 192.2
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 190.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 190.0
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 188.6
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 188.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 186.0
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 183.6
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 183.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 179.9
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 174.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 172.8
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 172.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 171.9
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 171.7
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 170.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 169.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 169.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 166.2
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 163.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 160.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 157.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 155.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 152.4
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 152.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 150.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 148.8
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 147.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 145.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 142.0
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 135.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 133.9
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 120.1
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 120.0
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 119.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 118.6
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 109.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 104.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 99.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 92.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 89.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 80.9
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 78.2
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Brain - Putamen (basal ganglia)
Average nTPM: 409.0
Samples: 205

Max nTPM: 2053.4
Min nTPM: 86.8
Std nTPM: 242.8
Median nTPM: 357.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 2053.4
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 1384.3
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 1346.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 1340.9
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 1117.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 1049.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 943.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 935.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 841.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 840.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 794.5
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 785.7
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 784.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 777.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 759.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 756.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 732.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 717.7
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 717.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 709.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 696.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 691.0
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 674.3
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 659.0
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 649.3
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 640.9
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 605.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 595.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 581.5
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 573.6
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 572.4
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 564.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 553.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 541.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 539.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 530.4
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 524.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 516.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 509.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 508.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 500.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 499.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 495.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 490.2
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 489.5
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 489.4
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 487.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 485.0
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 482.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 482.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 479.7
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 479.1
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 468.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 465.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 464.5
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 461.1
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 443.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 441.7
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 441.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 440.8
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 432.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 432.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 428.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 427.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 425.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 424.5
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 422.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 421.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 419.0
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 418.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 415.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 413.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 410.7
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 409.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 409.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 406.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 404.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 402.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 399.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 398.5
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 397.0
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 394.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 393.6
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 393.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 392.9
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 388.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 388.6
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 382.9
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 378.5
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 375.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 375.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 374.8
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 371.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 369.8
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 368.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 368.0
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 366.9
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 366.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 365.6
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 363.0
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 362.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 361.9
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 357.6
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 354.6
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 354.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 354.0
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 353.8
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 353.5
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 351.4
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 350.9
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 346.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 345.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 340.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 340.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 339.1
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 337.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 336.2
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 335.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 333.9
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 333.2
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 328.3
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 327.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 324.4
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 324.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 320.3
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 317.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 316.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 316.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 315.3
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 315.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 314.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 314.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 313.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 307.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 304.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 303.3
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 303.2
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 301.7
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 300.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 298.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 297.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 291.4
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 289.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 286.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 284.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 282.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 278.2
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 277.6
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 275.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 272.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 272.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 270.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 269.6
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 267.8
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 263.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 258.2
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 256.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 256.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 256.0
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 254.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 249.3
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 246.9
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 246.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 245.0
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 244.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 243.9
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 242.4
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 242.4
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 238.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 236.5
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 233.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 233.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 228.8
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 221.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 221.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 220.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 217.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 217.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 215.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 208.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 202.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 195.2
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 194.4
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 194.4
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 194.0
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 191.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 190.5
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 186.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 184.3
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 183.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 180.7
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 170.6
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 168.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 158.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 157.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 154.4
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 150.1
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 148.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 140.1
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 134.5
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 132.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 128.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 105.9
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 93.4
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 86.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

425.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 425.4
FF:10164-103B2 76 years, female 425.4
Nucleus accumbens
Scaled Tags Per Million: 343.5
FF:10037-101F1 23-56 years, mixed 343.5
Putamen
Scaled Tags Per Million: 202.0
FF:10176-103C5 60 years, female 202.0
Globus pallidus
Scaled Tags Per Million: 234.6
FF:10161-103A8 76 years, female 304.5
FF:10175-103C4 60 years, female 164.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

227.2
Pig sample Sample description nTPM
Caudate
nTPM: 191.2
Samples: 4

Max nTPM: 235.3
Min nTPM: 141.1
Sample A Female 168.7
Sample B Female 219.7
Sample C Male 235.3
Sample D Male 141.1
Putamen
nTPM: 90.9
Samples: 4

Max nTPM: 134.3
Min nTPM: 50.9
Sample A Female 50.9
Sample B Female 88.0
Sample C Male 134.3
Sample D Male 90.5
Septum
nTPM: 227.2
Samples: 4

Max nTPM: 378.3
Min nTPM: 166.1
Sample A Female 166.4
Sample B Female 198.0
Sample C Male 166.1
Sample D Male 378.3
Ventral pallidum
nTPM: 125.5
Samples: 4

Max nTPM: 177.7
Min nTPM: 69.6
Sample A Female 106.0
Sample B Female 177.7
Sample C Male 69.6
Sample D Male 148.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 30.5
Samples: 4

Max nTPM: 32.7
Min nTPM: 28.7
Sample A Male 28.9
Sample B Male 32.7
Sample C Female 28.7
Sample D Female 31.7
Septum
nTPM: 49.2
Samples: 4

Max nTPM: 55.5
Min nTPM: 43.2
Sample A Male 49.7
Sample B Male 48.4
Sample C Female 55.5
Sample D Female 43.2
Ventral forebrain
nTPM: 38.5
Samples: 4

Max nTPM: 57.6
Min nTPM: 29.5
Sample A Male 29.6
Sample B Male 37.4
Sample C Female 57.6
Sample D Female 29.5

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.9
79677375 Antisense, RP_071218_02_C11, Mouse strain C57BL/6J (56 days, male) 2.4
79677371 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 2.3
1310 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 1.1
79907904 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 0.9
1309 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 1.9
79677371 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 2.4
79677375 Antisense, RP_071218_02_C11, Mouse strain C57BL/6J (56 days, male) 2.3
1310 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 1.0
79907904 Antisense, RP_071218_02_C05, Mouse strain C57BL/6J (56 days, male) 0.8
1309 Antisense, RP_Baylor_103104, Mouse strain C57BL/6J (56 days, male) 0.2

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