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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:251.2 nTPM
HPA Brain:657.6 nTPM
GTEx:251.2 nTPM
FANTOM5:1548.8 Scaled Tags Per Million
Pig:143.4 nTPM
Mouse:74.3 nTPM
Allen mouse:3.2 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA011868Antibody CAB024949
Glial cells MediumLow
Neuronal cells HighMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

657.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 657.6
1857 Female, age 85, left hemisphere 915.6
2290 Female, age 72, unknown 813.7
1854 Male, age 80, left hemisphere 724.0
2846 Female, age 79, unknown 675.0
1781 Male, age 74, unknown 647.5
2289 Male, age 61, right hemisphere 576.4
2481 Female, age 94, left hemisphere 474.4
2288 Male, age 75, left hemisphere 434.1
Globus pallidus, externus
nTPM: 329.1
2646 Male, age 61, right hemisphere 402.8
2395 Male, age 75, both hemispheres 371.5
1996 Male, age 80, right hemisphere 331.4
2772 Female, age 79, unknown 319.1
2567 Female, age 72, unknown 220.5
Globus pallidus, internus
nTPM: 278.2
2483 Female, age 94, right hemisphere 493.6
2287 Male, age 75, right hemisphere 363.1
2037 Male, age 80, right hemisphere 277.5
1818 Male, age 74, unknown 257.2
2778 Female, age 91, both hemispheres 214.8
2566 Female, age 72, unknown 181.7
2111 Female, age 85, right hemisphere 159.3
Nucleus accumbens
nTPM: 628.1
2824 Male, age 61, right hemisphere 947.8
1806 Female, age 85, left hemisphere 833.0
1783 Male, age 74, unknown 781.2
1856 Female, age 91, right hemisphere 775.3
2698 Female, age 72, unknown 575.5
2286 Male, age 75, left hemisphere 477.5
2732 Male, age 80, right hemisphere 322.0
2391 Female, age 94, left hemisphere 312.3
Nucleus basalis of Meynert
nTPM: 454.1
2393 Male, age 80, right hemisphere 525.2
2484 Female, age 94, left hemisphere 487.1
2569 Male, age 61, both hemispheres 448.0
2821 Male, age 75, both hemispheres 356.0
Nucleus of the diagonal band
nTPM: 499.1
1812 Female, age 91, both hemispheres 567.2
2775 Male, age 80, right hemisphere 550.3
2195 Female, age 85, both hemispheres 507.4
2029 Male, age 61, right hemisphere 471.5
1979 Male, age 74, unknown 398.9
Putamen
nTPM: 593.2
1838 Male, age 80, right hemisphere 758.4
2466 Female, age 79, unknown 697.5
1829 Male, age 74, unknown 638.9
1937 Female, age 91, right hemisphere 629.6
2647 Male, age 75, left hemisphere 562.8
2482 Female, age 94, left hemisphere 454.7
2489 Female, age 72, unknown 410.3
Septal nuclei
nTPM: 410.4
1960 Male, age 74, unknown 557.3
2031 Female, age 72, unknown 508.0
2059 Female, age 85, both hemispheres 418.6
2009 Female, age 91, both hemispheres 400.0
2629 Female, age 94, right hemisphere 393.1
2394 Male, age 61, left hemisphere 308.4
2199 Male, age 80, right hemisphere 287.5
Stria terminalis, bed nucleus
nTPM: 430.3
1974 Female, age 91, both hemispheres 510.4
2486 Female, age 94, both hemispheres 484.6
2201 Male, age 74, unknown 295.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

251.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 193.2
Samples: 246

Max nTPM: 834.7
Min nTPM: 23.8
Std nTPM: 126.1
Median nTPM: 153.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 834.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 678.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 581.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 542.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 534.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 522.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 518.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 516.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 515.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 508.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 508.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 504.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 487.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 476.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 475.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 447.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 434.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 428.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 426.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 390.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 380.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 372.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 369.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 357.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 355.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 355.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 346.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 343.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 328.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 327.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 327.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 317.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 313.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 310.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 308.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 305.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 303.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 301.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 297.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 296.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 295.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 293.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 291.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 291.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 290.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 290.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 285.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 280.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 278.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 273.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 272.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 271.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 271.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 266.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 263.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 253.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 250.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 247.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 245.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 242.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 241.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 240.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 240.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 238.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 237.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 233.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 226.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 224.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 221.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 221.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 220.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 220.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 218.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 218.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 211.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 209.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 208.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 208.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 207.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 206.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 205.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 205.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 204.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 203.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 202.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 198.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 197.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 197.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 190.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 190.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 189.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 188.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 187.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 187.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 186.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 185.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 184.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 184.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 180.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 179.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 179.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 179.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 179.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 178.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 175.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 173.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 172.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 172.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 168.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 168.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 167.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 165.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 164.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 163.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 163.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 162.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 160.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 157.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 155.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 155.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 154.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 153.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 153.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 153.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 153.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 153.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 152.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 152.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 152.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 151.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 151.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 150.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 150.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 149.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 149.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 149.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 148.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 146.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 145.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 145.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 144.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 144.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 143.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 143.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 140.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 138.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 137.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 137.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 137.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 136.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 136.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 136.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 136.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 136.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 135.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 135.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 134.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 132.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 131.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 130.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 129.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 128.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 127.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 127.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 127.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 126.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 126.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 120.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 120.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 119.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 119.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 118.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 117.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 116.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 114.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 112.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 112.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 111.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 110.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 109.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 109.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 107.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 107.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 107.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 105.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 105.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 104.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 103.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 103.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 103.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 103.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 102.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 101.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 99.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 98.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 98.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 97.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 96.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 96.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 95.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 94.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 93.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 92.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 92.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 92.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 90.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 87.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 87.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 87.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 85.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 84.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 83.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 83.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 82.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 80.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 80.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 78.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 75.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 75.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 74.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 74.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 72.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 70.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 70.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 68.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 66.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 66.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 66.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 65.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 64.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 63.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 62.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 60.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 58.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 57.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 57.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 54.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 51.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 49.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 49.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 47.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 42.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 28.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 23.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 251.2
Samples: 246

Max nTPM: 745.1
Min nTPM: 29.3
Std nTPM: 165.9
Median nTPM: 213.0
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 745.1
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 741.7
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 705.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 677.2
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 659.5
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 652.2
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 624.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 612.2
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 605.1
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 592.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 589.8
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 561.9
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 556.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 544.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 530.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 529.1
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 525.1
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 524.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 516.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 515.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 514.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 508.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 495.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 494.5
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 494.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 491.4
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 489.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 477.5
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 477.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 465.8
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 464.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 464.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 464.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 463.8
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 461.2
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 456.4
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 448.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 440.2
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 435.9
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 433.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 433.0
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 432.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 424.3
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 423.2
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 417.2
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 414.9
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 413.2
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 410.1
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 406.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 406.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 404.2
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 403.4
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 403.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 399.9
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 399.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 385.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 385.5
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 385.0
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 382.7
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 375.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 372.9
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 366.5
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 363.0
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 361.4
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 355.1
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 354.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 352.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 352.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 348.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 346.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 343.4
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 342.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 337.9
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 334.5
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 334.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 332.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 330.8
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 330.6
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 326.8
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 317.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 304.6
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 301.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 295.4
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 294.5
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 293.2
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 290.3
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 289.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 286.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 286.4
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 286.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 282.7
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 281.6
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 281.6
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 281.2
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 275.0
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 273.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 268.7
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 268.1
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 266.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 266.3
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 263.3
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 262.8
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 260.2
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 259.4
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 258.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 246.4
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 244.6
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 241.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 241.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 239.6
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 238.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 238.0
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 233.8
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 232.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 230.0
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 226.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 223.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 223.0
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 221.4
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 220.4
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 216.3
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 213.9
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 213.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 213.0
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 208.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 206.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 202.8
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 202.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 199.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 199.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 199.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 192.2
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 189.3
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 188.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 183.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 182.6
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 181.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 179.3
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 177.9
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 177.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 173.6
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 172.8
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 172.8
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 172.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 166.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 164.8
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 161.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 160.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 159.9
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 158.9
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 158.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 157.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 155.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 154.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 154.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 152.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 151.6
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 149.9
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 148.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 147.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 145.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 144.5
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 143.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 137.2
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 137.1
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 135.1
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 133.9
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 133.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 132.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 130.0
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 126.8
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 126.0
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 125.6
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 124.5
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 124.5
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 123.8
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 122.3
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 121.9
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 119.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 117.6
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 117.1
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 116.6
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 116.4
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 115.7
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 111.7
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 111.3
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 109.8
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 107.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 106.7
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 105.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 105.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 102.0
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 101.6
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 100.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 100.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 99.9
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 99.7
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 98.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 98.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 96.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 93.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 91.6
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 91.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 90.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 90.8
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 88.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 88.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 86.8
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 84.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 81.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 81.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 80.6
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 80.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 79.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 79.2
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 76.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 73.9
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 70.6
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 69.3
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 68.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 68.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 65.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 65.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 63.3
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 62.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 61.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 60.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 59.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 59.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 58.3
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 54.4
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 54.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 53.4
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 52.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 51.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 50.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 47.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 47.0
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 45.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 44.9
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 44.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 44.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 44.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 37.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 36.8
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 29.3
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Brain - Putamen (basal ganglia)
Average nTPM: 170.9
Samples: 205

Max nTPM: 761.2
Min nTPM: 48.3
Std nTPM: 98.1
Median nTPM: 147.8
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 761.2
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 540.8
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 461.4
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 453.6
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 417.7
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 393.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 382.4
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 374.1
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 369.7
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 363.0
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 361.9
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 359.2
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 348.4
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 344.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 336.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 334.9
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 333.4
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 319.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 288.4
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 287.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 287.3
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 286.2
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 283.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 279.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 278.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 275.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 274.0
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 273.2
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 272.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 263.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 256.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 254.2
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 253.6
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 252.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 247.4
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 241.0
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 238.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 236.6
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 234.9
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 233.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 231.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 231.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 231.0
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 227.0
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 226.4
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 225.0
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 219.8
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 219.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 218.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 212.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 212.6
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 212.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 209.8
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 209.6
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 204.8
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 204.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 202.6
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 200.6
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 195.6
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 194.8
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 193.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 193.2
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 193.1
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 192.5
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 186.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 186.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 184.0
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 183.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 181.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 181.8
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 181.2
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 180.8
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 180.2
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 177.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 176.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 175.4
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 174.7
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 173.8
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 172.8
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 172.4
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 172.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 171.1
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 170.7
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 170.0
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 169.6
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 168.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 167.9
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 167.8
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 167.8
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 159.8
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 159.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 159.6
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 157.9
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 157.2
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 155.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 155.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 154.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 152.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 152.1
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 152.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 151.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 149.7
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 147.8
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 146.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 145.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 144.7
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 142.1
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 141.5
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 141.3
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 140.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 139.7
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 139.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 139.3
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 139.0
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 138.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 136.8
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 135.3
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 131.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 130.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 130.4
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 129.1
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 129.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 128.9
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 128.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 126.6
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 126.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 125.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 125.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 124.7
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 123.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 123.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 123.3
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 123.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 122.9
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 122.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 122.6
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 122.3
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 121.6
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 120.3
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 120.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 118.1
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 117.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 115.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 115.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 113.6
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 110.4
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 110.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 109.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 109.5
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 109.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 108.0
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 107.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 105.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 105.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 104.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 101.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 101.5
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 99.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 98.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 98.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 98.0
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 96.8
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 96.2
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 94.9
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 90.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 90.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 90.1
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 89.1
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 87.6
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 87.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 86.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 85.6
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 85.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 84.8
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 81.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 80.4
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 79.9
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 78.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 77.5
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 77.4
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 76.6
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 76.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 76.1
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 75.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 74.5
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 73.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 72.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 71.4
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 69.6
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 67.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 65.1
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 64.8
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 64.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 64.0
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 63.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 62.6
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 57.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 56.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 55.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 54.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 53.2
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 52.3
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 51.0
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 51.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 48.3
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

1548.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 1190.1
FF:10164-103B2 76 years, female 1190.1
Nucleus accumbens
Scaled Tags Per Million: 824.0
FF:10037-101F1 23-56 years, mixed 824.0
Putamen
Scaled Tags Per Million: 1548.8
FF:10176-103C5 60 years, female 1548.8
Globus pallidus
Scaled Tags Per Million: 648.7
FF:10175-103C4 60 years, female 904.8
FF:10161-103A8 76 years, female 392.6

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

143.4
Pig sample Sample description nTPM
Caudate
nTPM: 99.3
Samples: 4

Max nTPM: 112.2
Min nTPM: 84.6
Sample A Female 99.1
Sample B Female 101.2
Sample C Male 112.2
Sample D Male 84.6
Putamen
nTPM: 93.0
Samples: 4

Max nTPM: 123.6
Min nTPM: 73.1
Sample A Female 80.5
Sample B Female 73.1
Sample C Male 123.6
Sample D Male 94.6
Septum
nTPM: 143.5
Samples: 4

Max nTPM: 271.6
Min nTPM: 90.4
Sample A Female 115.0
Sample B Female 96.8
Sample C Male 271.6
Sample D Male 90.4
Ventral pallidum
nTPM: 112.1
Samples: 4

Max nTPM: 189.3
Min nTPM: 83.2
Sample A Female 86.4
Sample B Female 89.6
Sample C Male 189.3
Sample D Male 83.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 74.3
Samples: 4

Max nTPM: 85.4
Min nTPM: 63.1
Sample A Male 63.1
Sample B Male 64.7
Sample C Female 83.9
Sample D Female 85.4
Septum
nTPM: 56.1
Samples: 4

Max nTPM: 75.5
Min nTPM: 39.5
Sample A Male 75.5
Sample B Male 54.9
Sample C Female 54.6
Sample D Female 39.5
Ventral forebrain
nTPM: 52.3
Samples: 4

Max nTPM: 65.1
Min nTPM: 45.0
Sample A Male 46.8
Sample B Male 45.0
Sample C Female 65.1
Sample D Female 52.3

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

3.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.2
75492875 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 5.9
75457693 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 4.6
75496225 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 4.5
75457694 Antisense, RP_060523_03_F09, Mouse strain C57BL/6J (56 days, male) 4.4
75492877 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 4.4
75457696 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 4.2
75457695 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 4.1
75496227 Antisense, RP_060523_03_F09, Mouse strain C57BL/6J (56 days, male) 3.9
75492876 Antisense, RP_060523_03_F09, Mouse strain C57BL/6J (56 days, male) 3.7
75496228 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 3.7
75496238 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 3.1
75496742 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 3.0
75496753 Antisense, RP_060523_03_F09, Mouse strain C57BL/6J (56 days, male) 2.9
75496764 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 2.9
75492887 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 2.8
75496754 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 2.6
69117401 Antisense, RP_050330_01_B02, Mouse strain C57BL/6J (56 days, male) 1.6
347 Antisense, RP_Baylor_103179, Mouse strain C57BL/6J (56 days, male) 1.4
346 Antisense, RP_Baylor_103179, Mouse strain C57BL/6J (56 days, male) 1.1
79556605 Antisense, RP_071018_02_B12, Mouse strain C57BL/6J (56 days, male) 0.8
Pallidum
Expression energy: 1.6
75492875 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 2.9
75457694 Antisense, RP_060523_03_F09, Mouse strain C57BL/6J (56 days, male) 2.4
75457696 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 2.4
75492877 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 2.2
75457695 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 2.1
75457693 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 2.0
75496225 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 1.8
75496227 Antisense, RP_060523_03_F09, Mouse strain C57BL/6J (56 days, male) 1.8
75496228 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 1.7
75492876 Antisense, RP_060523_03_F09, Mouse strain C57BL/6J (56 days, male) 1.5
75496238 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 1.3
75492887 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 1.1
75496754 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 1.1
75496742 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 1.0
75496764 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 1.0
75496753 Antisense, RP_060523_03_F09, Mouse strain C57BL/6J (56 days, male) 0.9
69117401 Antisense, RP_050330_01_B02, Mouse strain C57BL/6J (56 days, male) 0.6
79556605 Antisense, RP_071018_02_B12, Mouse strain C57BL/6J (56 days, male) 0.4
346 Antisense, RP_Baylor_103179, Mouse strain C57BL/6J (56 days, male) 0.2
347 Antisense, RP_Baylor_103179, Mouse strain C57BL/6J (56 days, male) 0.1

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