HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:111.1 nTPM
HPA Brain:583.2 nTPM
GTEx:111.1 nTPM
FANTOM5:924.6 Scaled Tags Per Million
Pig:151.5 nTPM
Mouse:227.2 nTPM
Allen mouse:15.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA011868Antibody CAB024949
Glial cells LowLow
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 583.2
Sample id Sample description nTPM
Hippocampus
nTPM: 509.6
1898 Male, age 80, left hemisphere 696.3
1855 Male, age 76, left hemisphere 518.9
2148 Female, age 91, left hemisphere 494.6
2621 Female, age 67, right hemisphere 475.7
2529 Female, age 94, left hemisphere 460.3
1911 Female, age 85, right hemisphere 412.0
Dentate gyrus
nTPM: 522.4
1927 Female, age 91, both hemispheres 654.3
2010 Male, age 76, both hemispheres 569.5
2246 Female, age 85, both hemispheres 544.7
2528 Male, age 74, both hemispheres 504.6
2530 Female, age 94, left hemisphere 457.7
2531 Female, age 67, both hemispheres 403.7
Entorhinal gyrus
nTPM: 471.4
1938 Female, age 85, left hemisphere 567.2
2764 Male, age 80, right hemisphere 526.6
2613 Female, age 94, left hemisphere 507.4
2117 Female, age 91, right hemisphere 445.0
1787 Male, age 76, left hemisphere 432.5
2686 Male, age 75, right hemisphere 349.8
Hippocampus, CA1
nTPM: 583.2
2749 Male, age 80, left hemisphere 844.2
1873 Female, age 85, both hemispheres 587.4
2045 Male, age 76, both hemispheres 566.1
2527 Male, age 74, both hemispheres 532.5
2082 Female, age 91, right hemisphere 385.8
Hippocampus, CA2
nTPM: 512.8
1963 Male, age 80, left hemisphere 670.8
1892 Male, age 76, both hemispheres 622.5
1940 Female, age 85, left hemisphere 525.1
2249 Male, age 74, both hemispheres 431.7
2113 Female, age 91, right hemisphere 421.1
2437 Female, age 94, left hemisphere 405.3
Hippocampus, CA3
nTPM: 541.7
2137 Male, age 80, left hemisphere 715.6
2620 Female, age 94, left hemisphere 571.9
1867 Male, age 76, both hemispheres 545.6
2436 Male, age 74, both hemispheres 535.2
2861 Female, age 67, both hemispheres 445.7
1891 Female, age 85, both hemispheres 436.3
Parahippocampal cortex
nTPM: 440.2
1850 Male, age 80, both hemispheres 543.6
1933 Female, age 85, both hemispheres 498.2
2245 Female, age 91, both hemispheres 497.2
1990 Female, age 91, right hemisphere 466.8
2250 Female, age 67, right hemisphere 428.3
2692 Male, age 74, both hemispheres 405.5
2018 Male, age 76, both hemispheres 405.0
2693 Female, age 94, both hemispheres 403.9
2622 Female, age 67, right hemisphere 381.9
2532 Female, age 72, left hemisphere 371.4
Perirhinal gyrus
nTPM: 549.6
1847 Female, age 91, left hemisphere 633.5
1794 Male, age 80, right hemisphere 615.7
2521 Female, age 94, right hemisphere 563.2
1841 Female, age 85, right hemisphere 541.1
2848 Male, age 76, right hemisphere 394.4
Subiculum
nTPM: 441.1
1977 Female, age 85, both hemispheres 537.2
1901 Male, age 80, both hemispheres 488.3
2729 Female, age 91, right hemisphere 463.1
2619 Male, age 74, both hemispheres 448.4
2042 Male, age 76, both hemispheres 355.5
2438 Female, age 94, left hemisphere 354.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 111.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 111.1
Samples: 197

Max nTPM: 448.9
Min nTPM: 12.3
Std nTPM: 76.1
Median nTPM: 91.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 448.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 433.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 372.4
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 347.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 313.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 308.9
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 307.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 291.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 289.9
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 278.0
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 254.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 924.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 924.6
FF:10169-103B7 60 years, female 1163.2
FF:10153-102I9 76 years, female 686.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 151.5
Pig sample Sample description nTPM
Subiculum
nTPM: 136.6
Samples: 4

Max nTPM: 182.7
Min nTPM: 113.2
Sample A Female 182.7
Sample B Female 116.7
Sample C Male 133.9
Sample D Male 113.2
Dorsal hippocampus
nTPM: 141.7
Samples: 4

Max nTPM: 183.7
Min nTPM: 98.9
Sample A Female 183.7
Sample B Female 162.6
Sample C Male 121.4
Sample D Male 98.9
Entorhinal cortex
nTPM: 151.5
Samples: 4

Max nTPM: 160.8
Min nTPM: 131.5
Sample A Female 160.8
Sample B Female 155.7
Sample C Male 158.1
Sample D Male 131.5
Ventral hippocampus
nTPM: 150.1
Samples: 4

Max nTPM: 191.8
Min nTPM: 108.2
Sample A Female 187.5
Sample B Female 108.2
Sample C Male 191.8
Sample D Male 113.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 227.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 178.8
Samples: 4

Max nTPM: 226.2
Min nTPM: 116.0
Sample A Male 226.2
Sample B Male 200.1
Sample C Female 172.9
Sample D Female 116.0
Hippocampal formation
nTPM: 227.2
Samples: 4

Max nTPM: 255.9
Min nTPM: 197.4
Sample A Male 197.4
Sample B Male 242.2
Sample C Female 255.9
Sample D Female 213.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 15.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.4
75492877 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 19.2
75457695 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 18.5
75457696 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 18.2
75496228 Antisense, RP_060523_03_G09, Mouse strain C57BL/6J (56 days, male) 18.2
75457693 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 17.7
75496225 Antisense, RP_060523_03_E09, Mouse strain C57BL/6J (56 days, male) 17.5
75496238 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 17.4
75457694 Antisense, RP_060523_03_F09, Mouse strain C57BL/6J (56 days, male) 17.3
75496764 Antisense, RP_060523_03_H09, Mouse strain C57BL/6J (56 days, male) 17.1

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