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BCAS1
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  • BCAS1
BRAIN CEREBELLUM Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Cerebellum
CEREBELLUM - Expression summary
Protein expression
Cerebellumi

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Bergmann glia - cytoplasm/membrane: Not detected
Bergmann glia - nucleus: Not detected
GLUC cells - cytoplasm/membrane: Not detected
GLUC cells - nucleus: Not detected
Granular cells - cytoplasm/membrane: High
Granular cells - nucleus: Not detected
Molecular layer - neuropil: Not detected
Molecular layer cells - cytoplasm/membrane: High
Molecular layer cells - nucleus: Not detected
Processes in granular layer: Not detected
Processes in molecular layer: Not detected
Processes in white matter: Not detected
Purkinje cells - cytoplasm/membrane: Not detected
Purkinje cells - dendrites: Not detected
Purkinje cells - nucleus: Not detected
Synaptic glomeruli - capsule: Not detected
Synaptic glomeruli - core: Not detected
White matter cells - cytoplasm/membrane: High
White matter cells - nucleus: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:52.9 nTPM
HPA Brain:725.4 nTPM
GTEx:52.9 nTPM
FANTOM5:72.4 Scaled Tags Per Million
Pig:65.6 nTPM
Mouse:153.7 nTPM
Allen mouse:1.3 Expression energy

CEREBELLUM - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051816Antibody HPA054745Antibody CAB033558
Bergmann glia - cytoplasm/membrane Not detected--
Bergmann glia - nucleus Not detected--
GLUC cells - cytoplasm/membrane Not detected--
GLUC cells - nucleus Not detected--
Purkinje cells -Not detectedNot detected
Purkinje cells - cytoplasm/membrane Not detected--
Purkinje cells - dendrites Not detected--
Purkinje cells - nucleus Not detected--
Cells in granular layer -LowNot detected
Cells in molecular layer -Not detectedNot detected
Granular cells - cytoplasm/membrane High--
Granular cells - nucleus Not detected--
Molecular layer - neuropil Not detected--
Molecular layer cells - cytoplasm/membrane High--
Molecular layer cells - nucleus Not detected--
Processes in granular layer Not detected--
Processes in molecular layer Not detected--
Processes in white matter Not detected--
Synaptic glomeruli - capsule Not detected--
Synaptic glomeruli - core Not detected--
White matter cells - cytoplasm/membrane High--
White matter cells - nucleus Not detected--







CEREBELLUM - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

725.4
Sample id Sample description nTPM
Cerebellar cortex
nTPM: 105.8
2003 Female, age 85, right hemisphere 433.1
1769 Male, age 76, right hemisphere 84.3
2006 Male, age 61, right hemisphere 80.5
1788 Male, age 55, unknown 80.1
1768 Female, age 72, unknown 52.0
2055 Female, age 91, right hemisphere 47.9
1774 Male, age 80, left hemisphere 43.3
2101 Male, age 74, right hemisphere 24.8
Cerebellar nuclei
nTPM: 725.4
2882 Male, age 76, left hemisphere 1074.8
1871 Male, age 74, unknown 973.3
2005 Male, age 80, left hemisphere 828.6
1879 Male, age 55, unknown 796.0
2175 Male, age 61, right hemisphere 699.9
2177 Female, age 85, both hemispheres 635.5
2783 Female, age 72, unknown 566.9
1966 Female, age 91, left hemisphere 529.5
2318 Male, age 74, left hemisphere 424.0
Flocculonodular lobe
nTPM: 78.4
1765 Male, age 55, unknown 186.9
1767 Male, age 76, left hemisphere 86.6
2004 Male, age 61, right hemisphere 71.2
2176 Female, age 91, right hemisphere 63.6
1792 Male, age 74, unknown 57.2
1835 Female, age 85, right hemisphere 42.8
1771 Male, age 80, left hemisphere 40.6
Vermis
nTPM: 59.2
1770 Male, age 76, left hemisphere 120.7
1778 Female, age 91, left hemisphere 90.8
2834 Male, age 80, left hemisphere 71.3
2460 Male, age 61, both hemispheres 49.8
1751 Male, age 74, right hemisphere 47.9
1825 Male, age 74, unknown 42.8
1766 Male, age 55, unknown 38.2
1988 Female, age 85, left hemisphere 37.3
1928 Female, age 72, unknown 34.1

CEREBELLUM - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

52.9
GTEx sample id Sample description nTPM
Brain - Cerebellar Hemisphere
Average nTPM: 52.9
Samples: 215

Max nTPM: 360.3
Min nTPM: 10.9
Std nTPM: 47.1
Median nTPM: 37.3
GTEX-1CAV2-0011-R11a-SM-ARU8D 40-49 years, female 360.3
GTEX-1LKK1-0011-R11a-SM-EXOIG 50-59 years, female 329.0
GTEX-14C39-0011-R11b-SM-5YYAF 40-49 years, male 253.9
GTEX-13NYB-0011-R11a-SM-5KM3Q 40-49 years, male 232.5
GTEX-WHSE-0011-R11A-SM-3P5YY 20-29 years, male 200.5
GTEX-16XZZ-0011-R11a-SM-7EPI3 60-69 years, male 189.8
GTEX-131XW-0011-R11a-SM-5DUV9 50-59 years, female 173.6
GTEX-1IOXB-0011-R11a-SM-A9G1X 50-59 years, male 164.8
GTEX-1HUB1-0011-R11b-SM-CE6SC 60-69 years, male 148.2
GTEX-1B8SG-0011-R11a-SM-7P8PF 50-59 years, male 143.4
GTEX-139UW-0011-R11a-SM-5IJGN 60-69 years, male 141.1
GTEX-Z93S-0011-R11a-SM-4RGNN 50-59 years, male 135.6
GTEX-N7MT-0011-R11A-SM-2I3DZ 60-69 years, female 133.4
GTEX-145MI-0011-R11a-SM-5P9JZ 60-69 years, female 132.5
GTEX-16Z82-0011-R11a-SM-79OKJ 60-69 years, male 115.4
GTEX-11DYG-0011-R11a-SM-DNZZP 60-69 years, male 113.7
GTEX-1GZHY-0011-R11a-SM-C1YRQ 50-59 years, female 111.9
GTEX-ZF28-0011-R11a-SM-4WWEI 60-69 years, male 105.3
GTEX-13QIC-0011-R11b-SM-5O9BU 60-69 years, female 104.8
GTEX-1J8Q2-0011-R11a-SM-A9SKI 60-69 years, male 102.1
GTEX-WL46-0011-R11A-SM-3MJFT 50-59 years, male 101.9
GTEX-1C64N-0011-R11b-SM-7P8Q6 50-59 years, male 101.2
GTEX-13OVJ-0011-R11a-SM-5P9H8 50-59 years, female 97.0
GTEX-17EVQ-0011-R11a-SM-7LT9C 70-79 years, male 95.7
GTEX-ZE7O-0011-R11a-SM-57WBC 50-59 years, female 93.2
GTEX-1IGQW-0011-R11a-SM-C1YRV 60-69 years, male 93.2
GTEX-1R9K4-0011-R11a-SM-EZ6N9 60-69 years, male 93.0
GTEX-13PVQ-0011-R11a-SM-5O9DU 50-59 years, male 90.8
GTEX-1H3VE-0011-R11b-SM-C1YRP 40-49 years, male 84.7
GTEX-1IL2U-0011-R11a-SM-CE6SO 60-69 years, male 82.9
GTEX-1GMRU-0011-R11b-SM-C1YQ4 50-59 years, male 82.0
GTEX-11WQC-0011-R11b-SM-57WD6 60-69 years, male 81.2
GTEX-13FTY-0011-R11a-SM-5IJEA 40-49 years, female 79.5
GTEX-14E7W-0011-R11a-SM-5ZZVA 70-79 years, male 77.8
GTEX-UTHO-0011-R11A-SM-3GIJE 60-69 years, male 76.6
GTEX-1GF9W-0011-R11b-SM-9OSXG 60-69 years, male 76.6
GTEX-1IKOH-0011-R11a-SM-AHZ38 60-69 years, female 75.4
GTEX-1GTWX-0011-R11b-SM-C1YQJ 60-69 years, male 73.4
GTEX-1R9PO-0011-R11b-SM-EZ6NB 60-69 years, female 71.3
GTEX-13CZV-0011-R11b-SM-5N9FN 60-69 years, male 70.7
GTEX-16NPV-0011-R11a-SM-7IGMK 50-59 years, female 68.4
GTEX-1F75W-0011-R11b-SM-AHZ34 60-69 years, male 67.8
GTEX-OHPN-0011-R11A-SM-2I5FM 60-69 years, female 66.4
GTEX-1IKK5-0011-R11a-SM-C1YRX 60-69 years, male 65.4
GTEX-12126-0011-R11a-SM-5BC6X 20-29 years, male 64.6
GTEX-12WSI-0011-R11b-SM-5P9EZ 50-59 years, male 63.4
GTEX-13JVG-0011-R11a-SM-5KM53 60-69 years, male 63.0
GTEX-17JCI-0011-R11a-SM-7189Y 60-69 years, female 62.1
GTEX-12WSD-0011-R11a-SM-9OSVC 60-69 years, female 62.0
GTEX-1EKGG-0011-R11a-SM-9QEHZ 60-69 years, male 61.7
GTEX-1H4P4-0011-R11b-SM-CE6S8 50-59 years, male 58.0
GTEX-ZE9C-0011-R11a-SM-4WKGG 60-69 years, male 57.2
GTEX-11EI6-0011-R11a-SM-DO11V 60-69 years, male 56.8
GTEX-13FHP-0011-R11b-SM-5LZXP 50-59 years, male 56.5
GTEX-14BIN-0011-R11a-SM-5SI79 50-59 years, female 56.3
GTEX-12WSH-0011-R11a-SM-5LZVM 50-59 years, male 56.2
GTEX-1BAJH-0011-R11b-SM-7IGLM 70-79 years, male 56.2
GTEX-1IL2V-0011-R11a-SM-ARU6T 70-79 years, male 56.0
GTEX-1GZ4I-0011-R11b-SM-9OSWR 50-59 years, male 55.6
GTEX-14PN4-0011-R11a-SM-686ZW 50-59 years, male 55.3
GTEX-1F75A-0011-R11a-SM-AHZ35 50-59 years, male 54.2
GTEX-1M4P7-0011-R11b-SM-EXOIK 60-69 years, male 53.6
GTEX-1I19N-0011-R11b-SM-ARU6Y 70-79 years, male 53.5
GTEX-1E1VI-0011-R11a-SM-9OSWI 50-59 years, male 53.4
GTEX-131XH-0011-R11a-SM-5EGLN 50-59 years, male 53.1
GTEX-ZVT3-0011-R11b-SM-57WBI 60-69 years, female 52.8
GTEX-1A3MX-0011-R11b-SM-7DUGP 60-69 years, male 52.0
GTEX-145MH-0011-R11a-SM-5P9HQ 50-59 years, male 51.7
GTEX-1H3O1-0011-R11a-SM-A96RV 60-69 years, male 51.3
GTEX-11ZUS-0011-R11b-SM-5BC7B 30-39 years, male 51.1
GTEX-NL4W-0011-R11A-SM-2I3DW 50-59 years, male 50.8
GTEX-13OVL-0011-R11b-SM-5L3G7 50-59 years, male 50.7
GTEX-14BIM-0011-R11b-SM-5S2RN 60-69 years, female 50.2
GTEX-X261-0011-R11A-SM-4E3JY 50-59 years, male 50.2
GTEX-14E6D-0011-R11b-SM-664NP 50-59 years, male 49.7
GTEX-1HBPI-0011-R11b-SM-CE6SH 50-59 years, male 49.7
GTEX-1F7RK-0011-R11b-SM-9QEI2 20-29 years, female 49.5
GTEX-1HGF4-0011-R11a-SM-C1YRR 60-69 years, male 49.3
GTEX-18A6Q-0011-R11a-SM-72D6H 60-69 years, male 48.3
GTEX-11ZTS-0011-R11a-SM-DO113 60-69 years, female 48.2
GTEX-X585-0011-R11B-SM-46MUZ 50-59 years, male 47.6
GTEX-14C5O-0011-R11b-SM-6872H 60-69 years, male 47.1
GTEX-183WM-0011-R11a-SM-718A5 70-79 years, female 47.1
GTEX-13NZA-0011-R11b-SM-5KM4W 60-69 years, male 46.7
GTEX-11TTK-0011-R11b-SM-DO112 60-69 years, female 46.6
GTEX-13PLJ-0011-R11b-SM-5O9BS 60-69 years, female 46.0
GTEX-12WSC-0011-R11a-SM-5GU5J 50-59 years, male 44.5
GTEX-1JJEA-0011-R11a-SM-EXUTE 60-69 years, male 44.3
GTEX-13FHO-0011-R11b-SM-5LZYQ 60-69 years, male 44.2
GTEX-1F52S-0011-R11a-SM-CJI23 60-69 years, female 43.6
GTEX-N7MS-0011-R11A-SM-2HMJS 60-69 years, male 43.3
GTEX-13X6J-0011-R11a-SM-5P9HE 50-59 years, male 43.0
GTEX-P44H-0011-R11A-SM-2XCER 40-49 years, male 42.7
GTEX-ZDXO-0011-R11a-SM-4WWD9 60-69 years, male 42.3
GTEX-15G19-0011-R11b-SM-6LPIH 60-69 years, male 41.4
GTEX-1IY9M-0011-R11b-SM-A96TI 60-69 years, male 40.8
GTEX-1B8L1-0011-R11b-SM-793DJ 60-69 years, male 40.7
GTEX-13OW8-0011-R11a-SM-5L3GT 60-69 years, male 40.5
GTEX-1GMR8-0011-R11b-SM-9OSX2 50-59 years, female 40.5
GTEX-13O3Q-0011-R11b-SM-5KM2W 50-59 years, male 39.9
GTEX-11EMC-0011-R11b-SM-DNZZK 60-69 years, female 39.9
GTEX-145LU-0011-R11b-SM-5P9JX 50-59 years, male 39.6
GTEX-1JMOU-0011-R11b-SM-EXUTA 60-69 years, female 39.3
GTEX-11DXY-0011-R11a-SM-DNZZN 60-69 years, male 39.0
GTEX-XMD1-0011-R11A-SM-4AT5J 60-69 years, male 38.9
GTEX-13FLV-0011-R11a-SM-5LZZ7 50-59 years, male 38.8
GTEX-1I1HK-0011-R11a-SM-B2LVN 60-69 years, male 38.1
GTEX-13OW6-0011-R11a-SM-5L3H2 50-59 years, male 37.3
GTEX-11PRG-0011-R11b-SM-DNZZY 50-59 years, male 36.8
GTEX-12WSE-0011-R11b-SM-5P9JW 20-29 years, male 36.4
GTEX-ZAB4-0011-R11a-SM-4SOKI 40-49 years, male 36.4
GTEX-1HSKV-0011-R11b-SM-AHZ2E 60-69 years, male 36.3
GTEX-13JUV-0011-R11a-SM-5LZYH 40-49 years, female 36.1
GTEX-QMR6-0011-R11A-SM-32PKK 50-59 years, male 36.1
GTEX-18465-0011-R11a-SM-72D78 50-59 years, male 35.9
GTEX-12ZZZ-0011-R11a-SM-5EGLC 60-69 years, male 35.0
GTEX-12WSM-0011-R11a-SM-5DUX8 60-69 years, male 34.7
GTEX-NL3H-0011-R11A-SM-2I3E6 60-69 years, male 34.7
GTEX-132Q8-0011-R11b-SM-5DUW9 60-69 years, male 34.5
GTEX-16YQH-0011-R11b-SM-7LT98 30-39 years, male 34.5
GTEX-13SLX-0011-R11b-SM-5O9C8 50-59 years, female 34.3
GTEX-13OW5-0011-R11b-SM-5L3GG 60-69 years, male 34.2
GTEX-13SLW-0011-R11a-SM-5SI8Q 70-79 years, male 34.1
GTEX-17EVP-0011-R11a-SM-7EWDL 40-49 years, male 34.1
GTEX-T5JC-0011-R11A-SM-32PMB 20-29 years, male 33.3
GTEX-WWYW-0011-R11A-SM-3NB38 50-59 years, female 33.3
GTEX-1HCU6-0011-R11b-SM-AHZ2F 60-69 years, female 33.3
GTEX-1HB9E-0011-R11b-SM-ARU79 50-59 years, male 32.7
GTEX-R55E-0011-R11A-SM-2TC6I 20-29 years, male 32.5
GTEX-QDT8-0011-R11A-SM-32PKD 30-39 years, female 32.2
GTEX-13OW7-0011-R11a-SM-5O9DY 50-59 years, male 32.1
GTEX-14ASI-0011-R11b-SM-6AJBJ 60-69 years, male 31.7
GTEX-131YS-0011-R11b-SM-5EGLM 60-69 years, female 31.5
GTEX-18464-0011-R11a-SM-72D76 50-59 years, male 31.5
GTEX-1H3NZ-0011-R11b-SM-CE6SF 60-69 years, male 31.5
GTEX-ZVZQ-0011-R11a-SM-51MS6 60-69 years, female 31.4
GTEX-WZTO-0011-R11A-SM-4E3K9 40-49 years, male 31.2
GTEX-1N2DW-0011-R11b-SM-EXOIL 50-59 years, male 31.0
GTEX-17HII-0011-R11b-SM-7KFSX 50-59 years, male 30.7
GTEX-1ICLZ-0011-R11a-SM-CJI3N 60-69 years, male 30.7
GTEX-YJ89-0011-R11a-SM-4SOKA 60-69 years, male 30.6
GTEX-15ER7-0011-R11a-SM-6LPIL 20-29 years, female 30.4
GTEX-17HG3-0011-R11b-SM-7KFT4 30-39 years, female 30.3
GTEX-1F48J-0011-R11b-SM-9OSWV 50-59 years, female 30.2
GTEX-144GL-0011-R11b-SM-5P9F6 50-59 years, male 30.1
GTEX-1H1ZS-0011-R11a-SM-C1YQM 70-79 years, male 30.1
GTEX-1I1GR-0011-R11a-SM-CM2T5 60-69 years, male 30.0
GTEX-RVPV-0011-R11A-SM-2TF6F 60-69 years, male 29.9
GTEX-13X6I-0011-R11a-SM-5P9HN 60-69 years, male 29.6
GTEX-13G51-0011-R11b-SM-5J2NE 60-69 years, male 29.5
GTEX-X4EP-0011-R11B-SM-4QASK 60-69 years, female 29.3
GTEX-12WSF-0011-R11a-SM-5LZVT 70-79 years, male 29.1
GTEX-15DYW-0011-R11a-SM-6LPIT 60-69 years, female 29.1
GTEX-1I1GV-0011-R11a-SM-CJI3Z 60-69 years, male 29.0
GTEX-T6MN-0011-R11A-SM-32QOX 50-59 years, male 28.9
GTEX-1KD4Q-0011-R11b-SM-EXOIE 40-49 years, male 28.9
GTEX-11OF3-0011-R11a-SM-57WCR 60-69 years, male 28.3
GTEX-1JJ6O-0011-R11b-SM-EXUS2 60-69 years, male 28.2
GTEX-139TT-0011-R11b-SM-5LZV1 60-69 years, male 27.9
GTEX-Y8DK-0011-R11A-SM-4SOK2 60-69 years, male 27.8
GTEX-T2IS-0011-R11A-SM-32QPC 20-29 years, female 27.5
GTEX-13NYS-0011-R11b-SM-5MR4P 60-69 years, male 27.3
GTEX-1GN73-0011-R11b-SM-9OSX4 60-69 years, male 27.3
GTEX-1LSVX-0011-R11b-SM-EXOIA 60-69 years, male 27.2
GTEX-1B8SF-0011-R11a-SM-79OOP 60-69 years, male 27.1
GTEX-13RTJ-0011-R11a-SM-5O9CK 60-69 years, male 26.8
GTEX-13O3O-0011-R11b-SM-5KM4G 60-69 years, female 26.7
GTEX-RU72-0011-R11A-SM-CM2U1 50-59 years, female 26.7
GTEX-12ZZX-0011-R11a-SM-5DUVJ 40-49 years, female 26.6
GTEX-11GSP-0011-R11b-SM-5NQ7V 60-69 years, female 26.4
GTEX-1AX9I-0011-R11b-SM-7DHN4 60-69 years, male 26.3
GTEX-1CB4G-0011-R11a-SM-9OSWG 60-69 years, male 26.3
GTEX-1LG7Y-0011-R11a-SM-EXOIH 50-59 years, male 26.3
GTEX-1B933-0011-R11a-SM-7P8PM 50-59 years, female 25.8
GTEX-1IDJH-0011-R11b-SM-C1YRT 70-79 years, male 25.8
GTEX-13CF2-0011-R11b-SM-5LZXO 60-69 years, male 25.5
GTEX-13VXU-0011-R11b-SM-5O9DJ 50-59 years, male 25.4
GTEX-Q2AG-0011-R11A-SM-2HMKZ 40-49 years, female 25.4
GTEX-1313W-0011-R11a-SM-5DUXN 50-59 years, female 25.2
GTEX-1EMGI-0011-R11b-SM-9OSWX 60-69 years, male 25.0
GTEX-1H1DG-0011-R11a-SM-C1YQK 70-79 years, male 25.0
GTEX-P44G-0011-R11A-SM-2I3FD 30-39 years, male 24.8
GTEX-11H98-0011-R11b-SM-5NQ6U 50-59 years, male 24.6
GTEX-NPJ8-0011-R11A-SM-2YUMS 40-49 years, male 24.3
GTEX-16GPK-0011-R11b-SM-7MKFF 60-69 years, male 24.1
GTEX-1J8EW-0011-R11a-SM-AHZ37 60-69 years, female 24.1
GTEX-1HFI6-0011-R11b-SM-A96RU 40-49 years, male 24.0
GTEX-1JMQJ-0011-R11a-SM-EXOJY 50-59 years, male 23.5
GTEX-13FXS-0011-R11a-SM-5L3DM 50-59 years, male 22.4
GTEX-1J1OQ-0011-R11a-SM-A96S3 40-49 years, female 22.4
GTEX-X4XX-0011-R11A-SM-46MWQ 60-69 years, male 22.2
GTEX-17F97-0011-R11b-SM-7KFRQ 50-59 years, male 22.1
GTEX-15CHQ-0011-R11b-SM-686ZZ 60-69 years, male 21.8
GTEX-1I1GQ-0011-R11b-SM-CKZPA 50-59 years, male 21.7
GTEX-13S7M-0011-R11b-SM-5P9HU 60-69 years, female 21.6
GTEX-WVLH-0011-R11A-SM-3MJFO 50-59 years, male 20.7
GTEX-15DCD-0011-R11a-SM-D4P1R 70-79 years, female 20.7
GTEX-13X6K-0011-R11a-SM-5P9F5 60-69 years, female 20.4
GTEX-15EO6-0011-R11b-SM-6M47M 50-59 years, male 19.7
GTEX-1F6I4-0011-R11b-SM-9OSWS 60-69 years, male 18.7
GTEX-1LVAO-0011-R11b-SM-EXOI8 60-69 years, male 18.7
GTEX-NPJ7-0011-R11A-SM-2I3E8 60-69 years, female 18.5
GTEX-14ABY-0011-R11a-SM-5SI7C 50-59 years, male 18.4
GTEX-1H1CY-0011-R11a-SM-C1YQR 60-69 years, female 17.5
GTEX-ZUA1-0011-R11b-SM-51MTI 40-49 years, male 17.1
GTEX-11DZ1-0011-R11b-SM-DO11W 50-59 years, male 16.8
GTEX-TSE9-0011-R11A-SM-3DB7N 60-69 years, female 16.3
GTEX-13OVH-0011-R11b-SM-5KM4X 70-79 years, male 15.7
GTEX-YFC4-0011-R11a-SM-4SOK6 40-49 years, female 15.4
GTEX-1399T-0011-R11a-SM-5J2O1 60-69 years, male 15.3
GTEX-S7SE-0011-R11A-SM-2XCDD 50-59 years, male 14.7
GTEX-14DAQ-0011-R11a-SM-664NO 60-69 years, female 14.2
GTEX-1I1GS-0011-R11a-SM-C1YRU 60-69 years, male 14.0
GTEX-13N2G-0011-R11a-SM-5MR3F 60-69 years, male 13.1
GTEX-1N2EE-0011-R11b-SM-EXOIJ 60-69 years, male 10.9
Show allShow less
Brain - Cerebellum
Average nTPM: 46.5
Samples: 241

Max nTPM: 541.3
Min nTPM: 8.4
Std nTPM: 47.1
Median nTPM: 32.8
GTEX-1BAJH-3126-SM-7MGXY 70-79 years, male 541.3
GTEX-1GF9V-3026-SM-7P8R8 60-69 years, male 232.3
GTEX-13JUV-3026-SM-5K7WX 40-49 years, female 175.2
GTEX-11GSO-3026-SM-5Q5AL 60-69 years, male 164.3
GTEX-1RNSC-3126-SM-EVR4V 60-69 years, male 153.2
GTEX-13OVJ-2726-SM-5IJG6 50-59 years, female 152.2
GTEX-16XZZ-2926-SM-6LPK4 60-69 years, male 150.7
GTEX-WVLH-2926-SM-3MJG5 50-59 years, male 150.4
GTEX-ZVT3-2926-SM-5GU6M 60-69 years, female 139.8
GTEX-18A6Q-2826-SM-7LTAO 60-69 years, male 138.4
GTEX-14PJO-2926-SM-686ZI 60-69 years, male 136.3
GTEX-13OW6-2926-SM-5KM29 50-59 years, male 134.0
GTEX-Q2AG-2826-SM-2HMJQ 40-49 years, female 132.1
GTEX-11DYG-2926-SM-5H132 60-69 years, male 131.4
GTEX-145MG-3126-SM-5Q5D3 50-59 years, male 130.5
GTEX-16Z82-2926-SM-6LPJJ 60-69 years, male 128.3
GTEX-ZYFD-2926-SM-5GID9 50-59 years, male 120.0
GTEX-1GTWX-2926-SM-7MXV4 60-69 years, male 114.6
GTEX-1E2YA-2926-SM-7MGWX 50-59 years, male 109.9
GTEX-1JJE9-3026-SM-CNNPA 70-79 years, male 107.8
GTEX-13PVQ-2926-SM-5L3HJ 50-59 years, male 104.5
GTEX-WWYW-3026-SM-3NB36 50-59 years, female 99.4
GTEX-1EWIQ-3026-SM-7IGOJ 70-79 years, female 96.7
GTEX-ZF28-2926-SM-4WKG1 60-69 years, male 94.6
GTEX-1IL2V-3026-SM-CYPSA 70-79 years, male 90.3
GTEX-1C6VR-3026-SM-7IGLW 60-69 years, male 87.9
GTEX-1H1ZS-2926-SM-9WPP2 70-79 years, male 78.4
GTEX-1RQEC-3026-SM-DPRXM 60-69 years, male 76.6
GTEX-1E1VI-2926-SM-7IGLT 50-59 years, male 73.3
GTEX-Y111-2826-SM-4TT3O 50-59 years, male 73.1
GTEX-14E6D-2926-SM-664OP 50-59 years, male 73.0
GTEX-14PN4-3026-SM-664O4 50-59 years, male 72.9
GTEX-WZTO-2826-SM-3NM8P 40-49 years, male 72.8
GTEX-13OVL-3026-SM-5IJF1 50-59 years, male 71.9
GTEX-13OW7-2926-SM-5MR3Z 50-59 years, male 70.7
GTEX-1192X-3226-SM-5987D 50-59 years, male 68.8
GTEX-12WSD-3026-SM-5LZU7 60-69 years, female 68.3
GTEX-1KANB-3226-SM-D4P3G 50-59 years, male 67.5
GTEX-1EKGG-3126-SM-9WPO5 60-69 years, male 67.0
GTEX-1H3VE-2826-SM-9WPOL 40-49 years, male 66.4
GTEX-Z93S-2826-SM-57WBL 50-59 years, male 66.0
GTEX-1HSKV-2926-SM-B2LWJ 60-69 years, male 65.8
GTEX-13X6J-2926-SM-7EPGP 50-59 years, male 64.6
GTEX-11EI6-2926-SM-5985U 60-69 years, male 64.5
GTEX-13FHO-2926-SM-5L3ES 60-69 years, male 64.2
GTEX-PWO3-1026-SM-2I5F2 60-69 years, female 63.2
GTEX-NPJ8-2626-SM-2D7W2 40-49 years, male 62.8
GTEX-1B996-2926-SM-7MXUH 60-69 years, male 60.9
GTEX-11DXW-1026-SM-5H11K 40-49 years, male 60.4
GTEX-1C6WA-3326-SM-7MKGN 60-69 years, male 59.7
GTEX-1A8G7-3026-SM-73KTT 60-69 years, male 58.8
GTEX-13OW5-3126-SM-5MR3Y 60-69 years, male 57.5
GTEX-ZAK1-2926-SM-5HL9S 50-59 years, female 57.3
GTEX-1F52S-3026-SM-7P8PV 60-69 years, female 56.6
GTEX-1B8SG-1926-SM-73KUB 50-59 years, male 56.4
GTEX-1F48J-2726-SM-7P8PW 50-59 years, female 56.4
GTEX-13NYB-3226-SM-5J2ND 40-49 years, male 55.2
GTEX-145LU-2626-SM-5LU9Z 50-59 years, male 54.5
GTEX-13N2G-3126-SM-5IJGL 60-69 years, male 54.3
GTEX-14E7W-2926-SM-5S2R8 70-79 years, male 52.7
GTEX-1H3O1-1826-SM-A96TO 60-69 years, male 51.8
GTEX-1F75A-2926-SM-7MXVN 50-59 years, male 50.9
GTEX-1128S-2826-SM-5N9DI 60-69 years, female 50.7
GTEX-11ZUS-2826-SM-5EQKW 30-39 years, male 50.2
GTEX-11DXY-3126-SM-5N9BT 60-69 years, male 49.8
GTEX-ZDXO-2926-SM-4WKFM 60-69 years, male 49.6
GTEX-11PRG-2826-SM-5BC54 50-59 years, male 47.8
GTEX-12WSC-2926-SM-5BC5Z 50-59 years, male 47.4
GTEX-13FXS-3026-SM-5LZYO 50-59 years, male 47.2
GTEX-13O3Q-3026-SM-5IJGD 50-59 years, male 47.0
GTEX-144GL-2926-SM-5O99F 50-59 years, male 45.9
GTEX-1JMPZ-2826-SM-C1YRA 30-39 years, male 45.9
GTEX-RNOR-2226-SM-2TF5O 50-59 years, female 45.3
GTEX-1GZHY-3026-SM-7MXVA 50-59 years, female 45.2
GTEX-1KD4Q-3026-SM-EV7A7 40-49 years, male 45.1
GTEX-17HHY-2926-SM-79OJW 50-59 years, male 44.5
GTEX-1269C-3126-SM-5EGI6 60-69 years, female 44.1
GTEX-13JVG-3226-SM-5IJGJ 60-69 years, male 43.8
GTEX-1CB4G-2926-SM-7MKFQ 60-69 years, male 43.7
GTEX-1EH9U-3126-SM-7MXU5 60-69 years, male 43.6
GTEX-1JMLX-3026-SM-EV79Q 50-59 years, male 43.6
GTEX-11NV4-2226-SM-5BC4T 60-69 years, male 43.5
GTEX-ZAB4-2926-SM-57WCV 40-49 years, male 43.0
GTEX-1H3NZ-2926-SM-9WPQ8 60-69 years, male 42.3
GTEX-14BMV-2926-SM-5TDEE 50-59 years, male 41.9
GTEX-16YQH-2926-SM-6LPJE 30-39 years, male 41.8
GTEX-YFC4-3026-SM-5IFJK 40-49 years, female 41.4
GTEX-1GZ2Q-3026-SM-9JGG3 40-49 years, male 41.1
GTEX-WHSE-2926-SM-3NMBG 20-29 years, male 40.9
GTEX-12126-0926-SM-5FQTW 20-29 years, male 40.8
GTEX-12ZZZ-3126-SM-5LZU6 60-69 years, male 40.4
GTEX-T6MN-2526-SM-32PMN 50-59 years, male 40.3
GTEX-1KWVE-2226-SM-CXZKN 30-39 years, male 39.4
GTEX-13FHP-2926-SM-5IJG9 50-59 years, male 39.1
GTEX-11ZVC-3026-SM-59HJM 50-59 years, female 38.7
GTEX-1HCVE-2926-SM-9WPPJ 50-59 years, male 38.7
GTEX-P44G-2526-SM-2I5EK 30-39 years, male 38.2
GTEX-1JMQJ-3126-SM-EV79G 50-59 years, male 37.8
GTEX-N7MS-2526-SM-2D7W3 60-69 years, male 37.6
GTEX-QDT8-3026-SM-32PKB 30-39 years, female 37.6
GTEX-117XS-3126-SM-5GIDP 60-69 years, male 37.3
GTEX-X261-3126-SM-4PQZC 50-59 years, male 36.9
GTEX-PVOW-2626-SM-32PL8 40-49 years, male 36.5
GTEX-17JCI-3026-SM-7EWDR 60-69 years, female 36.4
GTEX-14A5I-2826-SM-5SIBF 50-59 years, female 36.3
GTEX-1EX96-3126-SM-9JGGC 50-59 years, male 35.6
GTEX-T2IS-2926-SM-32QPO 20-29 years, female 35.3
GTEX-1GZ4I-2926-SM-9JGGO 50-59 years, male 34.9
GTEX-1HB9E-3126-SM-AHZ4M 50-59 years, male 34.7
GTEX-1C64N-3126-SM-79OO3 50-59 years, male 34.4
GTEX-1H1CY-3026-SM-9OSW7 60-69 years, female 34.4
GTEX-1JN1M-3126-SM-AHZ4E 60-69 years, female 34.3
GTEX-1I1HK-2726-SM-AHZ2M 60-69 years, male 33.7
GTEX-12WSM-2126-SM-5GCOC 60-69 years, male 33.6
GTEX-1313W-3026-SM-5LZUZ 50-59 years, female 33.6
GTEX-14JFF-2826-SM-6871Q 60-69 years, male 33.6
GTEX-13RTJ-3126-SM-5S2Q4 60-69 years, male 33.3
GTEX-14BIN-3326-SM-5Q5E6 50-59 years, female 33.3
GTEX-12ZZY-2926-SM-5DUXO 60-69 years, male 32.9
GTEX-13CF2-3026-SM-5IFFX 60-69 years, male 32.8
GTEX-1POEN-2726-SM-E9U6B 30-39 years, female 32.8
GTEX-ZYY3-3026-SM-5GIEJ 60-69 years, female 32.6
GTEX-13OW8-2926-SM-5L3FV 60-69 years, male 32.2
GTEX-WL46-2826-SM-3LK81 50-59 years, male 32.2
GTEX-1PIIG-2826-SM-DTX7O 30-39 years, male 32.1
GTEX-13X6K-2826-SM-5O9DS 60-69 years, female 31.9
GTEX-T5JC-2326-SM-32PMR 20-29 years, male 31.6
GTEX-QMR6-1326-SM-32PLB 50-59 years, male 31.5
GTEX-1LSVX-2826-SM-EVR58 60-69 years, male 31.4
GTEX-15SHU-3026-SM-6LPIB 40-49 years, female 30.9
GTEX-1H4P4-2726-SM-9JGGB 50-59 years, male 30.9
GTEX-1F6I4-3026-SM-7P8SI 60-69 years, male 30.4
GTEX-1P4AB-3026-SM-EXOJS 50-59 years, male 30.1
GTEX-17HII-2926-SM-79OMK 50-59 years, male 29.4
GTEX-145MH-2926-SM-5Q5D2 50-59 years, male 29.3
GTEX-15DYW-3026-SM-7KFRM 60-69 years, female 29.3
GTEX-OHPN-2626-SM-2I5H1 60-69 years, female 29.1
GTEX-1IKOH-2826-SM-CNNRC 60-69 years, female 28.9
GTEX-1QEPI-3026-SM-EXOIW 60-69 years, female 28.9
GTEX-1EMGI-3126-SM-7MXUR 60-69 years, male 28.7
GTEX-14PJM-3026-SM-6LLHM 50-59 years, female 28.6
GTEX-11ONC-3026-SM-5985W 60-69 years, male 28.4
GTEX-11NUK-3026-SM-5986K 50-59 years, male 28.3
GTEX-11O72-2826-SM-5HL6W 40-49 years, male 28.3
GTEX-1H1DG-2826-SM-9JGHB 70-79 years, male 28.3
GTEX-1JJ6O-3026-SM-C1YQH 60-69 years, male 28.3
GTEX-13112-2926-SM-5DUWT 50-59 years, male 28.2
GTEX-13SLX-3226-SM-5YYA6 50-59 years, female 27.7
GTEX-14C39-3026-SM-5S2QE 40-49 years, male 27.6
GTEX-1RDX4-3226-SM-DPS14 50-59 years, female 27.6
GTEX-1B933-3026-SM-731DB 50-59 years, female 27.5
GTEX-13O3O-3026-SM-5KM42 60-69 years, female 27.3
GTEX-P44H-2426-SM-2XCEJ 40-49 years, male 27.3
GTEX-1QP6S-3026-SM-EAZ4N 40-49 years, male 27.2
GTEX-1LG7Y-3126-SM-EV7AS 50-59 years, male 27.0
GTEX-UTHO-2926-SM-3P5Z9 60-69 years, male 26.8
GTEX-1J1OQ-3126-SM-D4P2O 40-49 years, female 26.8
GTEX-139TS-3126-SM-5LZWX 60-69 years, male 26.5
GTEX-147F4-3026-SM-5Q5BJ 50-59 years, male 26.4
GTEX-NPJ7-2826-SM-2I3FU 60-69 years, female 26.3
GTEX-11ZTS-3226-SM-5EGID 60-69 years, female 25.5
GTEX-R55E-2526-SM-2TC6H 20-29 years, male 25.4
GTEX-147GR-3126-SM-5S2PM 60-69 years, male 25.2
GTEX-1JMQK-2926-SM-D4P2T 60-69 years, male 25.2
GTEX-1HSMO-2926-SM-C1YR5 60-69 years, male 25.1
GTEX-131XH-2926-SM-5LZU4 50-59 years, male 24.8
GTEX-1A8G6-3126-SM-731D8 60-69 years, male 24.6
GTEX-ZAJG-3026-SM-5HL92 50-59 years, female 24.4
GTEX-132Q8-2926-SM-5IFFP 60-69 years, male 24.1
GTEX-12WSE-2926-SM-5RQJ9 20-29 years, male 24.0
GTEX-15ER7-3026-SM-6M47W 20-29 years, female 23.8
GTEX-1B8L1-3226-SM-7P8OX 60-69 years, male 23.8
GTEX-13VXU-3026-SM-5LU3K 50-59 years, male 23.6
GTEX-15G19-2826-SM-6M48K 60-69 years, male 23.5
GTEX-1HBPI-2726-SM-9WPPF 50-59 years, male 23.4
GTEX-13G51-3126-SM-5IJG7 60-69 years, male 23.3
GTEX-17HG3-2826-SM-7EPGO 30-39 years, female 23.3
GTEX-139TT-2626-SM-5LZUB 60-69 years, male 23.1
GTEX-X4XX-2926-SM-3NMB1 60-69 years, male 22.9
GTEX-Y8DK-0726-SM-4TT3S 60-69 years, male 22.6
GTEX-1HBPH-3026-SM-9WPNY 40-49 years, female 22.5
GTEX-1R9PO-2826-SM-E6CPV 60-69 years, female 22.5
GTEX-S7SE-2526-SM-2XCDL 50-59 years, male 22.2
GTEX-1GN73-3026-SM-7MXV8 60-69 years, male 22.2
GTEX-111FC-3326-SM-5GZYV 60-69 years, male 22.1
GTEX-X4EP-3026-SM-3P5YP 60-69 years, female 22.1
GTEX-17EVP-2926-SM-793BU 40-49 years, male 22.0
GTEX-1PWST-3026-SM-EAZ3H 70-79 years, male 22.0
GTEX-17EVQ-2726-SM-7EWDT 70-79 years, male 21.8
GTEX-N7MT-1226-SM-DKPOK 60-69 years, female 21.7
GTEX-12ZZX-2826-SM-5BC6K 40-49 years, female 21.6
GTEX-14JG1-2926-SM-686ZK 40-49 years, male 21.3
GTEX-1JMOU-2826-SM-EV79R 60-69 years, female 21.3
GTEX-1B8SF-3026-SM-731DX 60-69 years, male 21.0
GTEX-1NV8Z-3026-SM-DTX8Z 60-69 years, male 21.0
GTEX-18465-2926-SM-7KFSE 50-59 years, male 20.3
GTEX-145MF-2826-SM-7EPGU 50-59 years, male 20.2
GTEX-1GF9W-2726-SM-9JGGW 60-69 years, male 20.1
GTEX-183WM-2726-SM-7KFRF 70-79 years, female 20.0
GTEX-1IY9M-3126-SM-AHZ3A 60-69 years, male 19.9
GTEX-14BIM-3126-SM-5Q5C7 60-69 years, female 19.8
GTEX-14C5O-2926-SM-5RQI1 60-69 years, male 19.7
GTEX-1F75W-3126-SM-7P8SJ 60-69 years, male 19.7
GTEX-14DAQ-3026-SM-5S2QZ 60-69 years, female 19.6
GTEX-1CB4H-3026-SM-79OLX 60-69 years, female 19.6
GTEX-131YS-3026-SM-5EGHY 60-69 years, female 19.5
GTEX-YJ89-2926-SM-5P9IT 60-69 years, male 19.5
GTEX-1IDJH-3126-SM-C1YQS 70-79 years, male 19.3
GTEX-13X6I-2926-SM-5Q5C3 60-69 years, male 19.1
GTEX-1F6IF-3026-SM-7P8QN 60-69 years, male 19.0
GTEX-XMD1-2826-SM-4AT5F 60-69 years, male 18.9
GTEX-11DZ1-2926-SM-5A5KI 50-59 years, male 18.8
GTEX-11GSP-3126-SM-5A5LL 60-69 years, female 18.8
GTEX-14ASI-2926-SM-5Q5DG 60-69 years, male 18.4
GTEX-XLM4-2926-SM-4AT59 60-69 years, male 18.4
GTEX-11EMC-3326-SM-5P9JH 60-69 years, female 17.9
GTEX-1I1GV-3026-SM-CNNR9 60-69 years, male 17.7
GTEX-145LS-3026-SM-5O99S 60-69 years, female 17.6
GTEX-1MJK2-3026-SM-EV7A5 50-59 years, male 17.6
GTEX-11OC5-0626-SM-5HL6M 60-69 years, male 17.4
GTEX-14ABY-3026-SM-664NE 50-59 years, male 17.2
GTEX-1I1CD-2926-SM-A96SJ 60-69 years, female 17.1
GTEX-17F97-2926-SM-7DUEQ 50-59 years, male 17.0
GTEX-12WSH-3126-SM-5LZW8 50-59 years, male 16.8
GTEX-13S7M-3026-SM-5S2QQ 60-69 years, female 16.7
GTEX-14JIY-2326-SM-6AJAJ 60-69 years, male 16.6
GTEX-1EU9M-2926-SM-793DF 60-69 years, male 16.6
GTEX-QVJO-1325-SM-2S1QX 60-69 years, female 16.6
GTEX-TSE9-2926-SM-3DB77 60-69 years, female 16.3
GTEX-15EO6-2926-SM-6M48D 50-59 years, male 15.3
GTEX-1A3MX-2926-SM-718B7 60-69 years, male 15.0
GTEX-QVUS-2926-SM-3GIJB 60-69 years, female 15.0
GTEX-1399T-3126-SM-5IJFS 60-69 years, male 14.8
GTEX-RU72-2926-SM-2TF66 50-59 years, female 14.7
GTEX-13QIC-3026-SM-5LU58 60-69 years, female 14.5
GTEX-ZUA1-2926-SM-59HL3 40-49 years, male 13.9
GTEX-11TTK-2826-SM-5GU5K 60-69 years, female 13.6
GTEX-1JJEA-2926-SM-C1YSK 60-69 years, male 12.4
GTEX-1R46S-3126-SM-DPRZ9 60-69 years, female 12.4
GTEX-ZZPT-2926-SM-5EQ5S 50-59 years, male 12.3
GTEX-13OVH-2926-SM-5IJFH 70-79 years, male 8.4
Show allShow less

CEREBELLUM - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

72.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Cerebellum
Scaled Tags Per Million: 72.4
FF:10083-102B2 22-68 years, mixed 96.8
FF:10166-103B4 76 years, female 48.0

CEREBELLUM - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.6
Pig sample Sample description nTPM
Cerebellum
nTPM: 65.7
Samples: 4

Max nTPM: 76.9
Min nTPM: 49.2
Sample A Female 64.4
Sample B Female 76.9
Sample C Male 72.1
Sample D Male 49.2

CEREBELLUM - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

153.7
Mouse sample Sample description nTPM
Cerebellum
nTPM: 153.7
Samples: 4

Max nTPM: 157.7
Min nTPM: 152.0
Sample A Male 152.4
Sample B Male 152.5
Sample C Female 152.0
Sample D Female 157.7

CEREBELLUM - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.3
Allen experiment id Experiment description Expression energy
Cerebellum
Expression energy: 1.3
77371831 Antisense, RP_070116_02_E08, Mouse strain C57BL/6J (56 days, male) 1.3

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