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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
999.3
nTPM
FANTOM5:
860.8
Scaled Tags Per Million
Pig:
563.6
nTPM
Allen mouse:
3.4
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
999.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 943.7
2301
Female, age 85, both hemispheres
1215.1
2188
Female, age 91, both hemispheres
1206.9
2090
Male, age 80, both hemispheres
872.6
1984
Male, age 76, both hemispheres
480.2
Dorsal cochlear nucleus nTPM: 807.0
2802
Male, age 74, right hemisphere
896.1
2187
Female, age 91, both hemispheres
892.8
2378
Male, age 80, both hemispheres
836.5
2370
Male, age 61, both hemispheres
734.5
2058
Male, age 76, both hemispheres
675.1
Dorsal tegmental nucleus nTPM: 723.2
2083
Male, age 80, both hemispheres
900.8
2326
Male, age 74, both hemispheres
709.4
1936
Male, age 76, left hemisphere
654.4
2358
Male, age 61, both hemispheres
628.1
Dorsolateral tegmental area nTPM: 631.7
2654
Male, age 80, both hemispheres
908.2
2751
Female, age 85, both hemispheres
850.2
2337
Male, age 61, both hemispheres
694.1
2360
Male, age 74, both hemispheres
368.2
2141
Male, age 76, both hemispheres
338.0
Kolliker-Fuse nucleus nTPM: 796.9
2793
Female, age 91, left hemisphere
1251.5
2163
Male, age 80, both hemispheres
770.9
2315
Male, age 76, right hemisphere
368.4
Lateral lemniscal nuclei nTPM: 661.2
2320
Female, age 91, left hemisphere
822.5
2453
Male, age 74, right hemisphere
714.2
2169
Male, age 76, both hemispheres
668.4
2036
Male, age 80, both hemispheres
621.8
2746
Female, age 85, left hemisphere
479.0
Lateral parabrachial nucleus nTPM: 678.0
2792
Male, age 76, both hemispheres
1077.8
2013
Male, age 80, both hemispheres
647.3
2790
Male, age 61, both hemispheres
618.0
2139
Female, age 85, right hemisphere
368.8
Lateral vestibular nucleus nTPM: 851.7
2311
Male, age 80, both hemispheres
956.3
2184
Male, age 76, both hemispheres
747.1
Locus coeruleus nTPM: 328.8
2720
Male, age 74, both hemispheres
657.0
2162
Male, age 80, both hemispheres
440.1
2788
Male, age 74, unknown
280.9
2317
Female, age 72, unknown
266.2
2123
Female, age 91, both hemispheres
262.6
2014
Male, age 55, unknown
223.9
1980
Male, age 76, both hemispheres
170.7
Medial parabrachial nucleus nTPM: 827.1
2170
Female, age 91, both hemispheres
1014.4
2854
Male, age 80, both hemispheres
817.1
2463
Female, age 85, right hemisphere
810.8
2786
Male, age 76, both hemispheres
794.8
2156
Male, age 61, both hemispheres
698.3
Medial periolivary nuclei nTPM: 698.6
2458
Female, age 91, both hemispheres
1070.9
2081
Male, age 80, both hemispheres
818.7
2063
Male, age 76, both hemispheres
610.5
2171
Female, age 85, both hemispheres
581.2
2791
Male, age 74, right hemisphere
411.9
Motor facial nucleus nTPM: 814.6
2697
Female, age 85, both hemispheres
1157.4
2327
Male, age 80, both hemispheres
957.6
2795
Female, age 91, both hemispheres
921.9
2126
Male, age 61, both hemispheres
825.0
2365
Male, age 74, right hemisphere
533.0
2062
Male, age 76, both hemispheres
492.4
Motor trigeminal nucleus nTPM: 836.5
2321
Female, age 91, both hemispheres
1117.3
2309
Male, age 76, both hemispheres
885.7
2079
Male, age 80, both hemispheres
791.8
2560
Male, age 74, both hemispheres
698.5
2335
Male, age 61, both hemispheres
689.4
Nuclei of the trapezoid body nTPM: 703.9
2166
Male, age 80, both hemispheres
1023.6
2368
Female, age 91, both hemispheres
844.2
2159
Male, age 61, both hemispheres
627.9
1983
Male, age 76, both hemispheres
565.3
2735
Female, age 85, both hemispheres
458.7
Nucleus raphe magnus nTPM: 668.4
2328
Male, age 80, both hemispheres
937.6
2459
Female, age 91, both hemispheres
864.3
2051
Male, age 76, both hemispheres
767.3
2172
Female, age 85, both hemispheres
539.3
2455
Male, age 74, both hemispheres
523.6
2160
Male, age 61, both hemispheres
378.5
Paramedian reticular nucleus nTPM: 850.0
2052
Male, age 76, both hemispheres
1390.4
2057
Male, age 80, both hemispheres
714.8
2050
Female, age 85, both hemispheres
674.6
2313
Male, age 61, both hemispheres
620.0
Pedunculopontine tegmental nucleus nTPM: 599.4
2338
Male, age 61, both hemispheres
697.9
2334
Male, age 80, both hemispheres
673.1
1921
Female, age 85, both hemispheres
427.1
Pontine nuclei nTPM: 676.1
2319
Female, age 91, both hemispheres
1035.6
1968
Male, age 76, left hemisphere
821.3
2115
Male, age 80, left hemisphere
780.9
2454
Male, age 74, left hemisphere
660.3
1863
Male, age 55, unknown
601.9
2787
Female, age 85, both hemispheres
568.7
2109
Female, age 72, unknown
563.7
2727
Male, age 61, right hemisphere
376.1
Pontine raphe nucleus nTPM: 478.2
2122
Female, age 85, midline
573.7
2853
Male, age 76, midline
382.7
Posteroventral cochlear nucleus nTPM: 999.3
2341
Male, age 80, both hemispheres
1502.8
2135
Female, age 91, both hemispheres
1295.8
2371
Male, age 61, both hemispheres
857.5
2070
Male, age 76, both hemispheres
776.4
2752
Female, age 85, both hemispheres
563.9
Principal sensory trigeminal nucleus nTPM: 686.2
2367
Female, age 91, left hemisphere
957.7
2324
Male, age 76, both hemispheres
769.2
2008
Male, age 80, left hemisphere
536.2
2158
Male, age 61, both hemispheres
481.9
Reticular pontine nucleus, caudal nTPM: 895.8
2457
Female, age 91, both hemispheres
1176.6
2332
Male, age 80, right hemisphere
876.1
2092
Male, age 76, both hemispheres
774.6
2559
Male, age 74, both hemispheres
755.8
Reticular pontine nucleus, oral nTPM: 782.8
2366
Female, age 91, both hemispheres
1231.5
1939
Male, age 80, both hemispheres
726.3
2167
Male, age 76, both hemispheres
715.6
2361
Male, age 74, both hemispheres
642.0
2012
Female, age 85, both hemispheres
598.6
Reticulotegmental nucleus nTPM: 880.6
2322
Female, age 91, both hemispheres
1155.5
2333
Male, age 80, both hemispheres
921.7
2452
Male, age 74, both hemispheres
811.7
2325
Male, age 76, both hemispheres
633.3
Spinal trigeminal nucleus, oral nTPM: 648.4
2164
Male, age 80, both hemispheres
930.1
1978
Male, age 76, both hemispheres
584.2
2737
Female, age 85, both hemispheres
431.0
Subcoeruleus area nTPM: 696.5
2369
Female, age 85, left hemisphere
983.2
2089
Male, age 76, left hemisphere
703.3
1958
Male, age 80, both hemispheres
695.9
2451
Male, age 74, both hemispheres
642.5
2323
Female, age 91, left hemisphere
457.5
Superior olive nTPM: 783.1
2561
Female, age 91, both hemispheres
1052.5
2020
Male, age 76, both hemispheres
1035.0
2329
Male, age 80, right hemisphere
906.6
1875
Female, age 85, both hemispheres
525.3
2364
Male, age 74, right hemisphere
396.2
Ventral periolivary nuclei nTPM: 779.6
2023
Male, age 76, both hemispheres
931.6
2794
Female, age 91, left hemisphere
896.5
2165
Male, age 80, both hemispheres
844.6
2130
Female, age 85, both hemispheres
445.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 702.7
2456
Female, age 91, both hemispheres
881.1
2161
Male, age 80, both hemispheres
779.4
2840
Female, age 85, both hemispheres
732.2
1959
Male, age 76, both hemispheres
725.4
2359
Male, age 61, both hemispheres
552.9
2449
Male, age 74, both hemispheres
545.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
563.6
Pig sample
Sample description
nTPM
Pons nTPM: 563.6
Samples: 4
Max nTPM: 831.4
Min nTPM: 330.6
Sample A
Female
330.6
Sample B
Female
364.8
Sample C
Male
727.7
Sample D
Male
831.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
