We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
PABPC1
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • PABPC1
TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:826.9 nTPM
GTEx:826.9 nTPM
FANTOM5:970.9 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045423Antibody CAB011536
Squamous epithelial cells Not detectedMedium





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

826.9
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 826.9
Samples: 156

Max nTPM: 2119.5
Min nTPM: 304.6
Std nTPM: 396.6
Median nTPM: 741.3
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 2119.5
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 2029.5
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 1895.2
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 1720.9
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 1685.1
GTEX-14PKU-1326-SM-6871B 40-49 years, female 1650.5
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 1641.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 1629.8
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 1564.9
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 1530.6
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 1521.8
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 1489.4
GTEX-11I78-2026-SM-5987C 50-59 years, female 1481.3
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 1476.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 1472.8
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 1467.6
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 1376.8
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 1367.8
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 1348.6
GTEX-S341-1226-SM-4AD5S 40-49 years, female 1335.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 1315.4
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 1294.2
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 1278.0
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 1263.3
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 1262.7
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 1249.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 1246.7
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 1190.6
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 1189.6
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 1181.8
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 1152.3
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 1139.7
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 1133.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 1117.7
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 1103.4
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 1098.4
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 1093.8
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 1076.9
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 1075.6
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 1075.0
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 1074.1
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 1073.6
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 1059.6
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 1052.6
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 1041.2
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 1015.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 1000.4
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 998.9
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 981.6
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 974.0
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 969.7
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 934.4
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 915.5
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 889.6
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 887.3
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 882.9
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 882.1
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 875.5
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 855.7
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 854.9
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 853.8
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 848.9
GTEX-1C475-0526-SM-793AC 40-49 years, female 842.6
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 831.5
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 826.1
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 814.6
GTEX-16NPV-2526-SM-6M483 50-59 years, female 811.2
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 800.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 790.1
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 781.7
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 778.8
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 778.6
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 777.4
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 765.5
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 758.6
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 755.0
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 752.6
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 742.0
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 740.6
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 738.7
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 728.4
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 722.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 720.4
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 704.2
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 702.3
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 699.9
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 696.0
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 682.2
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 680.0
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 674.8
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 667.5
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 665.9
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 648.5
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 644.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 644.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 636.3
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 635.0
GTEX-QCQG-1226-SM-48U23 50-59 years, female 631.3
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 629.8
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 629.0
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 628.4
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 619.2
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 609.1
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 600.1
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 593.1
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 587.4
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 587.3
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 581.1
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 566.5
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 548.0
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 547.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 536.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 526.8
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 526.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 517.4
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 498.0
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 494.1
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 494.0
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 487.7
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 485.7
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 483.6
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 478.6
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 465.2
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 459.4
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 450.0
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 438.0
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 437.7
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 437.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 427.5
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 426.2
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 408.5
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 408.2
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 407.4
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 404.4
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 403.2
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 396.2
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 394.8
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 394.0
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 393.8
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 391.4
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 388.0
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 377.6
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 375.8
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 375.5
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 375.1
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 374.1
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 369.0
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 368.1
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 365.0
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 352.0
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 347.6
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 347.2
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 320.4
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 310.1
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 306.1
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 304.6
Show allShow less

VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

970.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 970.9
FF:10204-103F6 68 years, female 970.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org