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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:129.1 nTPM
HPA Brain:103.4 nTPM
GTEx:129.1 nTPM
FANTOM5:101.0 Scaled Tags Per Million
Pig:106.5 nTPM
Mouse:256.0 nTPM
Allen mouse:10.7 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA031531
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

103.4
Sample id Sample description nTPM
Caudate nucleus
nTPM: 87.7
2481 Female, age 94, left hemisphere 103.6
2288 Male, age 75, left hemisphere 94.5
2846 Female, age 79, unknown 93.7
1857 Female, age 85, left hemisphere 88.6
1781 Male, age 74, unknown 85.8
2290 Female, age 72, unknown 83.3
1854 Male, age 80, left hemisphere 79.5
2289 Male, age 61, right hemisphere 72.3
Globus pallidus, externus
nTPM: 97.4
2395 Male, age 75, both hemispheres 125.0
2772 Female, age 79, unknown 111.6
1996 Male, age 80, right hemisphere 100.8
2646 Male, age 61, right hemisphere 80.3
2567 Female, age 72, unknown 69.5
Globus pallidus, internus
nTPM: 92.1
1818 Male, age 74, unknown 99.8
2483 Female, age 94, right hemisphere 99.4
2287 Male, age 75, right hemisphere 96.3
2778 Female, age 91, both hemispheres 96.3
2037 Male, age 80, right hemisphere 91.8
2566 Female, age 72, unknown 83.8
2111 Female, age 85, right hemisphere 77.2
Nucleus accumbens
nTPM: 86.2
2391 Female, age 94, left hemisphere 97.6
2286 Male, age 75, left hemisphere 95.0
2698 Female, age 72, unknown 92.8
1856 Female, age 91, right hemisphere 90.8
1806 Female, age 85, left hemisphere 83.9
1783 Male, age 74, unknown 82.2
2732 Male, age 80, right hemisphere 76.2
2824 Male, age 61, right hemisphere 71.1
Nucleus basalis of Meynert
nTPM: 83.5
2821 Male, age 75, both hemispheres 97.7
2569 Male, age 61, both hemispheres 79.8
2484 Female, age 94, left hemisphere 78.3
2393 Male, age 80, right hemisphere 78.0
Nucleus of the diagonal band
nTPM: 103.4
1812 Female, age 91, both hemispheres 122.9
2775 Male, age 80, right hemisphere 109.6
2195 Female, age 85, both hemispheres 109.1
2029 Male, age 61, right hemisphere 94.9
1979 Male, age 74, unknown 80.5
Putamen
nTPM: 82.4
2482 Female, age 94, left hemisphere 102.7
2466 Female, age 79, unknown 83.4
1829 Male, age 74, unknown 82.8
1937 Female, age 91, right hemisphere 80.5
2647 Male, age 75, left hemisphere 79.7
1838 Male, age 80, right hemisphere 78.8
2489 Female, age 72, unknown 68.7
Septal nuclei
nTPM: 100.3
1960 Male, age 74, unknown 126.4
2031 Female, age 72, unknown 111.0
2009 Female, age 91, both hemispheres 101.6
2629 Female, age 94, right hemisphere 100.7
2059 Female, age 85, both hemispheres 94.5
2394 Male, age 61, left hemisphere 85.3
2199 Male, age 80, right hemisphere 82.6
Stria terminalis, bed nucleus
nTPM: 88.5
1974 Female, age 91, both hemispheres 104.2
2486 Female, age 94, both hemispheres 82.6
2201 Male, age 74, unknown 78.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

129.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 126.6
Samples: 246

Max nTPM: 189.6
Min nTPM: 94.1
Std nTPM: 16.2
Median nTPM: 125.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 189.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 189.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 178.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 178.0
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 164.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 163.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 161.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 160.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 158.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 158.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 156.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 156.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 155.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 154.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 154.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 153.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 151.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 150.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 149.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 149.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 148.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 148.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 148.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 147.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 146.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 146.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 146.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 145.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 144.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 144.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 144.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 144.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 143.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 143.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 143.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 143.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 142.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 142.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 142.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 142.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 141.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 141.0
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 140.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 139.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 139.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 139.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 138.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 138.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 138.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 138.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 138.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 138.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 138.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 138.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 137.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 137.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 137.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 136.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 136.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 135.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 135.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 135.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 134.3
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 134.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 133.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 133.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 133.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 133.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 132.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 132.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 132.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 132.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 132.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 132.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 132.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 131.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 131.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 131.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 131.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 131.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 131.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 131.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 130.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 130.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 130.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 130.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 130.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 130.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 130.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 129.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 129.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 129.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 129.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 129.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 129.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 129.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 128.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 128.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 128.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 128.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 127.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 127.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 127.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 127.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 127.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 127.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 127.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 127.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 126.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 126.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 126.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 126.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 126.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 126.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 126.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 126.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 126.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 126.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 126.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 125.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 125.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 125.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 125.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 125.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 125.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 125.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 125.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 125.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 125.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 125.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 125.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 125.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 124.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 124.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 124.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 124.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 124.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 124.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 123.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 123.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 123.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 123.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 123.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 123.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 123.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 123.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 123.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 123.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 123.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 122.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 122.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 122.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 121.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 121.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 121.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 121.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 121.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 121.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 121.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 120.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 120.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 120.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 120.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 120.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 120.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 119.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 119.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 119.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 118.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 118.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 118.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 118.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 117.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 117.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 117.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 116.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 116.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 116.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 116.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 116.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 116.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 115.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 115.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 115.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 115.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 114.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 114.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 114.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 114.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 114.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 114.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 114.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 114.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 113.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 113.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 113.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 113.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 113.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 113.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 113.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 112.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 112.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 111.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 111.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 111.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 111.3
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 111.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 111.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 111.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 110.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 110.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 110.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 109.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 108.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 108.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 108.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 108.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 108.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 108.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 107.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 107.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 107.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 107.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 107.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 106.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 105.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 105.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 104.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 104.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 103.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 102.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 101.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 101.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 100.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 100.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 100.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 100.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 100.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 99.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 99.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 97.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 96.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 96.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 94.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 94.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 94.1
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 127.1
Samples: 246

Max nTPM: 188.9
Min nTPM: 79.5
Std nTPM: 15.2
Median nTPM: 126.4
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 188.9
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 163.3
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 160.8
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 157.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 156.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 155.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 153.9
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 153.7
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 153.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 153.5
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 151.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 151.1
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 151.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 150.7
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 150.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 149.8
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 148.7
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 148.6
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 148.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 147.9
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 147.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 147.6
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 147.1
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 146.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 146.5
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 146.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 146.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 145.7
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 145.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 145.2
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 145.0
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 144.8
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 144.6
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 144.5
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 144.5
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 144.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 144.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 143.6
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 143.5
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 143.4
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 143.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 142.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 142.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 142.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 141.8
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 141.7
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 141.4
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 141.3
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 139.9
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 139.7
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 139.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 139.3
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 139.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 138.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 138.2
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 138.0
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 137.9
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 137.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 137.7
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 137.6
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 137.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 137.3
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 137.0
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 136.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 136.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 136.6
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 136.2
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 135.9
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 135.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 135.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 135.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 135.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 135.2
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 135.0
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 134.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 134.9
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 134.6
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 134.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 134.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 134.1
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 134.0
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 133.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 133.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 132.8
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 132.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 132.3
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 132.3
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 132.0
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 131.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 131.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 131.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 131.1
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 130.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 130.6
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 130.6
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 130.6
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 130.5
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 130.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 130.5
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 130.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 130.1
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 129.7
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 129.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 129.4
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 129.4
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 129.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 128.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 128.7
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 128.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 128.5
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 128.5
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 128.3
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 127.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 127.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 127.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 127.3
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 127.2
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 126.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 126.8
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 126.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 126.5
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 126.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 126.5
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 126.3
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 126.1
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 126.1
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 126.0
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 125.8
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 125.8
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 125.4
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 125.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 125.3
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 125.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 125.2
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 125.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 124.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 124.7
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 124.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 124.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 124.3
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 124.2
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 124.0
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 124.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 123.9
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 123.9
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 123.9
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 123.8
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 123.7
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 123.5
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 123.5
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 123.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 122.7
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 122.4
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 122.3
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 122.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 122.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 122.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 122.0
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 121.8
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 121.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 121.7
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 121.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 121.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 121.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 121.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 120.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 120.6
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 120.3
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 120.3
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 120.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 120.2
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 119.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 119.7
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 119.4
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 118.6
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 118.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 118.4
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 118.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 118.0
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 117.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 117.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 117.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 117.6
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 117.2
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 117.2
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 117.2
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 117.2
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 117.2
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 116.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 116.7
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 116.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 116.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 116.3
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 116.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 115.9
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 115.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 115.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 115.5
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 115.4
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 115.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 114.7
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 114.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 114.1
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 113.8
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 113.7
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 113.6
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 113.3
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 113.2
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 113.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 113.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 112.1
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 111.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 111.6
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 111.5
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 111.1
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 110.0
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 109.0
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 108.8
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 108.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 108.0
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 107.8
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 107.7
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 107.5
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 106.6
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 106.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 106.5
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 105.9
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 105.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 105.3
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 105.1
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 104.9
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 104.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 103.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 103.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 102.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 99.9
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 99.5
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 98.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 98.2
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 96.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 96.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 93.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 92.4
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 88.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 85.2
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 79.5
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Brain - Putamen (basal ganglia)
Average nTPM: 129.1
Samples: 205

Max nTPM: 170.6
Min nTPM: 95.1
Std nTPM: 14.1
Median nTPM: 128.3
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 170.6
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 169.2
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 167.7
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 165.5
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 164.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 163.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 160.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 160.1
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 154.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 154.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 152.4
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 151.5
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 150.0
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 149.4
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 149.3
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 149.1
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 148.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 148.7
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 148.1
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 148.1
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 147.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 147.8
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 145.9
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 145.7
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 145.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 144.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 144.5
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 144.5
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 144.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 144.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 144.0
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 143.4
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 142.7
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 142.6
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 142.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 141.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 141.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 141.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 141.0
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 140.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 140.0
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 139.9
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 139.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 139.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 139.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 138.9
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 138.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 137.6
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 137.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 137.2
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 136.9
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 136.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 136.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 136.3
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 136.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 136.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 136.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 135.9
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 135.8
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 135.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 135.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 135.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 135.0
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 134.9
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 134.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 134.6
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 134.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 134.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 134.2
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 134.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 134.0
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 133.8
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 133.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 133.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 133.4
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 133.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 133.3
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 133.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 133.0
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 132.8
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 132.6
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 132.2
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 132.1
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 131.9
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 131.9
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 131.8
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 131.8
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 131.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 131.4
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 131.2
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 130.5
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 130.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 130.3
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 130.0
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 129.6
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 129.5
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 128.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 128.7
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 128.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 128.6
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 128.4
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 128.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 128.3
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 128.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 128.1
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 128.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 127.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 127.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 127.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 127.2
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 127.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 127.1
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 127.0
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 126.9
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 126.5
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 126.3
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 125.8
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 125.7
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 125.7
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 125.6
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 125.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 125.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 125.2
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 125.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 125.0
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 124.9
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 124.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 124.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 124.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 124.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 124.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 124.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 123.9
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 123.9
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 123.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 123.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 122.9
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 122.5
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 122.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 122.3
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 122.3
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 122.1
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 121.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 121.9
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 121.5
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 121.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 120.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 120.1
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 120.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 119.8
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 119.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 119.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 119.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 118.4
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 118.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 118.3
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 118.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 118.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 118.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 118.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 118.0
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 118.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 117.9
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 117.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 117.7
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 117.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 117.1
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 117.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 116.6
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 116.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 116.3
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 116.3
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 116.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 116.2
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 115.9
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 115.0
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 114.7
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 114.3
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 114.1
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 114.0
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 113.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 112.7
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 112.0
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 111.7
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 111.2
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 110.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 110.7
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 110.5
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 110.3
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 109.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 109.4
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 108.0
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 107.7
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 106.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 105.9
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 105.1
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 105.1
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 104.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 104.0
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 104.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 103.2
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 102.5
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 100.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 98.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 95.1
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

101.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 99.8
FF:10164-103B2 76 years, female 99.8
Nucleus accumbens
Scaled Tags Per Million: 97.3
FF:10037-101F1 23-56 years, mixed 97.3
Putamen
Scaled Tags Per Million: 101.0
FF:10176-103C5 60 years, female 101.0
Globus pallidus
Scaled Tags Per Million: 71.3
FF:10161-103A8 76 years, female 90.0
FF:10175-103C4 60 years, female 52.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.5
Pig sample Sample description nTPM
Caudate
nTPM: 86.5
Samples: 4

Max nTPM: 103.0
Min nTPM: 74.2
Sample A Female 80.6
Sample B Female 88.2
Sample C Male 103.0
Sample D Male 74.2
Putamen
nTPM: 98.2
Samples: 4

Max nTPM: 114.6
Min nTPM: 77.9
Sample A Female 100.5
Sample B Female 77.9
Sample C Male 114.6
Sample D Male 99.6
Septum
nTPM: 106.6
Samples: 4

Max nTPM: 117.7
Min nTPM: 89.7
Sample A Female 102.8
Sample B Female 89.7
Sample C Male 117.7
Sample D Male 116.0
Ventral pallidum
nTPM: 93.6
Samples: 4

Max nTPM: 109.2
Min nTPM: 85.4
Sample A Female 86.7
Sample B Female 93.2
Sample C Male 109.2
Sample D Male 85.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

256.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 233.6
Samples: 4

Max nTPM: 243.3
Min nTPM: 216.0
Sample A Male 242.5
Sample B Male 216.0
Sample C Female 232.5
Sample D Female 243.3
Septum
nTPM: 256.0
Samples: 4

Max nTPM: 267.8
Min nTPM: 244.1
Sample A Male 244.1
Sample B Male 267.4
Sample C Female 267.8
Sample D Female 244.6
Ventral forebrain
nTPM: 237.8
Samples: 4

Max nTPM: 255.6
Min nTPM: 219.1
Sample A Male 219.1
Sample B Male 226.6
Sample C Female 255.6
Sample D Female 249.8

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.7
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.7
75080633 Antisense, RP_060412_04_G04, Mouse strain C57BL/6J (56 days, male) 12.5
70919131 Antisense, RP_050712_04_C05, Mouse strain C57BL/6J (56 days, male) 9.9
74357646 Antisense, RP_060119_03_B08, Mouse strain C57BL/6J (56 days, male) 9.7
Pallidum
Expression energy: 9.7
75080633 Antisense, RP_060412_04_G04, Mouse strain C57BL/6J (56 days, male) 11.0
70919131 Antisense, RP_050712_04_C05, Mouse strain C57BL/6J (56 days, male) 9.1
74357646 Antisense, RP_060119_03_B08, Mouse strain C57BL/6J (56 days, male) 9.1

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