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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:337.1 nTPM
HPA Brain:975.5 nTPM
GTEx:337.1 nTPM
FANTOM5:842.4 Scaled Tags Per Million
Pig:69.9 nTPM
Mouse:104.0 nTPM
Allen mouse:1.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029841
Glial cells Not detected
Neuronal cells Low



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

975.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 298.2
2288 Male, age 75, left hemisphere 482.8
2481 Female, age 94, left hemisphere 324.8
2846 Female, age 79, unknown 320.9
1781 Male, age 74, unknown 305.1
1854 Male, age 80, left hemisphere 291.7
2290 Female, age 72, unknown 270.0
2289 Male, age 61, right hemisphere 214.3
1857 Female, age 85, left hemisphere 176.2
Globus pallidus, externus
nTPM: 850.2
1996 Male, age 80, right hemisphere 1146.2
2772 Female, age 79, unknown 881.2
2395 Male, age 75, both hemispheres 792.1
2646 Male, age 61, right hemisphere 790.5
2567 Female, age 72, unknown 640.9
Globus pallidus, internus
nTPM: 975.5
2111 Female, age 85, right hemisphere 1317.0
2778 Female, age 91, both hemispheres 1193.3
2287 Male, age 75, right hemisphere 989.6
1818 Male, age 74, unknown 951.9
2037 Male, age 80, right hemisphere 880.7
2566 Female, age 72, unknown 825.8
2483 Female, age 94, right hemisphere 669.9
Nucleus accumbens
nTPM: 415.7
2391 Female, age 94, left hemisphere 777.9
2698 Female, age 72, unknown 537.4
2732 Male, age 80, right hemisphere 482.1
2286 Male, age 75, left hemisphere 469.7
1806 Female, age 85, left hemisphere 301.0
2824 Male, age 61, right hemisphere 300.8
1783 Male, age 74, unknown 273.9
1856 Female, age 91, right hemisphere 183.1
Nucleus basalis of Meynert
nTPM: 475.7
2569 Male, age 61, both hemispheres 729.4
2821 Male, age 75, both hemispheres 467.6
2393 Male, age 80, right hemisphere 365.1
2484 Female, age 94, left hemisphere 340.6
Nucleus of the diagonal band
nTPM: 164.9
1812 Female, age 91, both hemispheres 294.4
2029 Male, age 61, right hemisphere 164.9
1979 Male, age 74, unknown 148.1
2775 Male, age 80, right hemisphere 116.5
2195 Female, age 85, both hemispheres 100.8
Putamen
nTPM: 342.0
2482 Female, age 94, left hemisphere 465.5
1829 Male, age 74, unknown 434.9
2489 Female, age 72, unknown 351.3
2647 Male, age 75, left hemisphere 351.1
1937 Female, age 91, right hemisphere 343.9
2466 Female, age 79, unknown 289.4
1838 Male, age 80, right hemisphere 157.9
Septal nuclei
nTPM: 257.3
2394 Male, age 61, left hemisphere 563.8
2199 Male, age 80, right hemisphere 299.5
2629 Female, age 94, right hemisphere 250.8
2059 Female, age 85, both hemispheres 217.5
2009 Female, age 91, both hemispheres 182.8
2031 Female, age 72, unknown 168.4
1960 Male, age 74, unknown 118.2
Stria terminalis, bed nucleus
nTPM: 204.6
1974 Female, age 91, both hemispheres 250.8
2201 Male, age 74, unknown 205.5
2486 Female, age 94, both hemispheres 157.6

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

337.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 244.8
Samples: 246

Max nTPM: 1076.7
Min nTPM: 73.7
Std nTPM: 128.5
Median nTPM: 219.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 1076.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 731.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 695.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 619.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 605.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 583.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 555.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 548.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 542.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 518.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 506.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 491.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 487.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 463.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 462.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 458.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 448.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 439.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 439.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 438.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 431.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 429.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 424.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 414.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 412.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 405.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 405.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 404.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 398.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 394.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 390.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 380.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 371.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 367.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 366.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 356.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 355.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 354.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 351.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 351.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 351.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 348.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 345.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 335.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 334.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 334.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 332.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 330.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 325.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 321.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 318.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 314.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 312.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 308.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 306.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 306.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 305.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 299.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 297.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 296.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 296.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 293.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 290.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 290.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 288.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 280.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 280.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 280.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 277.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 277.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 273.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 273.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 272.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 272.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 271.8
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 270.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 269.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 269.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 267.7
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 266.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 266.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 266.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 264.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 262.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 262.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 255.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 250.4
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 249.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 247.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 244.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 242.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 241.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 241.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 241.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 240.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 238.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 237.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 237.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 236.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 235.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 235.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 235.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 234.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 233.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 232.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 231.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 230.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 229.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 228.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 228.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 228.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 228.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 227.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 226.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 225.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 224.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 224.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 223.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 223.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 222.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 221.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 220.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 219.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 219.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 217.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 216.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 216.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 214.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 214.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 212.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 210.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 209.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 209.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 209.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 208.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 207.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 205.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 204.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 203.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 203.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 201.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 199.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 198.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 198.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 194.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 190.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 188.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 186.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 185.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 185.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 184.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 184.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 183.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 181.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 180.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 179.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 179.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 177.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 176.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 176.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 175.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 175.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 175.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 175.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 173.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 173.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 173.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 173.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 172.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 171.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 170.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 169.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 168.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 167.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 166.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 166.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 166.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 165.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 164.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 161.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 160.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 160.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 159.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 158.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 157.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 152.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 152.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 151.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 151.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 149.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 148.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 146.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 146.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 145.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 145.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 145.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 144.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 144.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 143.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 140.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 140.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 139.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 139.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 138.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 137.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 136.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 135.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 134.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 134.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 133.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 132.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 130.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 130.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 130.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 130.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 129.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 128.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 126.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 125.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 123.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 122.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 122.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 122.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 121.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 120.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 120.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 120.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 119.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 119.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 118.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 118.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 116.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 109.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 107.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 106.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 106.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 96.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 95.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 95.3
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 93.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 93.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 92.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 92.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 87.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 85.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 73.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 192.1
Samples: 246

Max nTPM: 1327.7
Min nTPM: 49.3
Std nTPM: 152.6
Median nTPM: 138.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 1327.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 911.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 884.4
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 784.6
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 644.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 616.2
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 591.5
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 589.2
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 570.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 547.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 525.3
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 503.9
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 501.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 485.0
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 447.4
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 408.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 397.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 391.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 390.0
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 386.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 364.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 358.7
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 347.4
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 345.5
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 335.8
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 335.5
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 317.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 313.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 306.2
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 304.9
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 304.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 303.6
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 300.4
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 294.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 292.7
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 292.6
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 291.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 289.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 287.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 282.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 281.6
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 280.1
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 270.6
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 269.0
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 268.2
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 266.8
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 266.4
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 264.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 254.3
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 251.0
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 250.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 249.6
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 247.5
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 237.8
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 236.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 235.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 233.6
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 232.8
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 231.3
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 230.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 229.1
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 229.1
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 221.3
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 217.1
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 209.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 207.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 207.4
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 207.2
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 206.3
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 205.0
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 204.9
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 204.0
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 203.9
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 202.8
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 201.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 201.8
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 201.1
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 200.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 199.4
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 199.0
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 198.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 198.5
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 197.1
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 195.4
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 194.1
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 190.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 190.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 187.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 187.2
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 185.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 184.9
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 182.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 182.0
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 177.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 177.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 176.5
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 173.6
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 172.2
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 169.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 168.9
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 168.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 168.1
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 164.9
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 164.6
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 163.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 163.1
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 161.3
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 156.9
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 156.8
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 155.6
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 155.1
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 154.2
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 152.6
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 152.2
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 150.2
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 149.6
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 145.2
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 144.5
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 144.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 142.7
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 139.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 139.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 138.8
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 138.4
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 138.4
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 135.3
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 134.3
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 134.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 133.8
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 133.3
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 132.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 130.4
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 130.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 129.9
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 129.5
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 128.5
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 128.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 128.3
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 128.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 127.6
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 126.8
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 126.6
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 125.5
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 125.2
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 125.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 124.3
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 123.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 121.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 121.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 119.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 119.7
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 118.5
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 118.1
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 118.0
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 118.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 116.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 116.4
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 115.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 115.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 114.4
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 113.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 113.9
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 113.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 113.3
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 112.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 112.8
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 112.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 112.1
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 112.0
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 111.6
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 111.5
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 111.3
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 110.2
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 109.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 109.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 109.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 109.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 109.2
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 109.1
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 108.7
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 107.3
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 107.3
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 107.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 107.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 105.6
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 105.6
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 104.6
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 103.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 103.6
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 103.3
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 102.9
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 101.0
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 99.6
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 99.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 98.7
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 98.5
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 97.4
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 96.7
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 96.6
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 96.5
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 95.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 95.1
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 95.0
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 94.3
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 94.1
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 94.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 93.6
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 93.2
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 93.0
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 92.0
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 91.8
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 91.4
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 91.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 90.6
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 90.6
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 90.0
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 89.9
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 88.8
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 88.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 87.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 84.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 83.1
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 82.3
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 80.2
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 79.9
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 79.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 78.7
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 77.0
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 76.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 76.6
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 76.4
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 75.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 74.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 74.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 73.3
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 72.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 72.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 70.5
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 69.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 67.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 67.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 63.9
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 63.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 60.7
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 58.7
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 49.3
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Brain - Putamen (basal ganglia)
Average nTPM: 337.1
Samples: 205

Max nTPM: 1234.6
Min nTPM: 96.8
Std nTPM: 152.3
Median nTPM: 312.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 1234.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 873.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 872.9
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 780.1
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 720.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 696.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 690.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 671.2
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 665.5
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 627.5
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 626.6
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 619.6
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 604.6
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 601.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 592.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 577.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 573.7
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 545.4
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 530.2
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 515.1
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 512.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 503.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 498.0
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 496.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 492.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 487.2
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 486.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 476.7
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 469.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 468.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 467.7
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 463.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 461.7
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 457.4
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 457.1
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 456.9
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 455.7
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 453.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 433.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 429.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 423.0
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 419.4
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 417.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 416.7
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 404.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 400.6
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 400.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 400.0
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 399.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 398.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 398.5
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 396.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 394.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 393.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 386.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 384.1
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 383.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 382.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 381.6
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 381.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 380.0
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 378.2
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 372.4
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 371.8
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 370.4
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 368.9
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 368.3
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 367.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 366.9
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 363.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 362.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 359.2
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 355.7
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 349.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 348.4
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 343.0
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 343.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 342.5
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 339.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 337.3
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 333.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 328.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 328.1
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 327.4
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 326.9
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 324.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 323.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 322.7
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 322.7
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 322.3
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 322.1
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 322.0
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 320.8
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 319.1
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 319.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 317.5
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 316.4
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 316.3
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 315.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 315.6
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 315.0
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 313.1
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 312.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 311.7
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 311.7
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 311.3
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 310.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 307.3
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 303.4
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 298.9
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 296.3
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 293.8
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 292.8
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 285.8
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 285.8
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 285.3
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 284.4
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 283.2
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 282.0
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 281.9
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 280.5
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 279.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 279.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 279.2
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 278.3
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 277.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 275.9
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 271.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 270.9
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 270.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 268.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 264.3
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 262.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 261.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 261.1
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 261.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 258.0
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 256.9
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 256.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 255.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 255.1
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 252.4
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 251.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 250.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 249.0
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 248.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 247.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 247.7
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 245.5
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 244.3
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 243.9
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 243.5
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 242.4
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 241.9
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 240.7
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 240.1
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 238.5
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 236.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 234.9
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 232.5
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 225.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 223.2
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 222.3
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 221.8
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 221.6
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 219.7
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 219.7
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 219.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 215.4
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 213.7
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 213.1
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 212.2
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 212.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 211.5
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 210.3
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 210.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 204.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 199.7
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 197.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 197.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 194.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 188.7
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 184.4
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 183.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 178.4
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 175.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 171.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 170.7
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 169.8
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 168.8
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 167.9
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 163.9
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 162.7
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 161.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 156.3
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 155.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 154.2
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 153.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 151.9
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 146.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 139.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 127.8
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 127.6
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 118.7
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 96.8
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

842.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 242.8
FF:10164-103B2 76 years, female 242.8
Nucleus accumbens
Scaled Tags Per Million: 373.7
FF:10037-101F1 23-56 years, mixed 373.7
Putamen
Scaled Tags Per Million: 209.8
FF:10176-103C5 60 years, female 209.8
Globus pallidus
Scaled Tags Per Million: 842.4
FF:10161-103A8 76 years, female 937.0
FF:10175-103C4 60 years, female 747.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

69.9
Pig sample Sample description nTPM
Caudate
nTPM: 37.7
Samples: 4

Max nTPM: 40.2
Min nTPM: 33.4
Sample A Female 40.2
Sample B Female 38.3
Sample C Male 33.4
Sample D Male 38.7
Putamen
nTPM: 69.9
Samples: 4

Max nTPM: 106.4
Min nTPM: 47.5
Sample A Female 106.4
Sample B Female 47.5
Sample C Male 60.3
Sample D Male 65.4
Septum
nTPM: 53.7
Samples: 4

Max nTPM: 63.8
Min nTPM: 44.4
Sample A Female 54.1
Sample B Female 44.4
Sample C Male 63.8
Sample D Male 52.5
Ventral pallidum
nTPM: 55.8
Samples: 4

Max nTPM: 67.7
Min nTPM: 38.7
Sample A Female 38.7
Sample B Female 51.3
Sample C Male 67.7
Sample D Male 65.6

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

104.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 84.7
Samples: 4

Max nTPM: 86.9
Min nTPM: 82.7
Sample A Male 84.3
Sample B Male 82.7
Sample C Female 84.8
Sample D Female 86.9
Septum
nTPM: 104.0
Samples: 4

Max nTPM: 113.5
Min nTPM: 88.7
Sample A Male 88.7
Sample B Male 113.5
Sample C Female 109.4
Sample D Female 104.5
Ventral forebrain
nTPM: 78.2
Samples: 4

Max nTPM: 85.1
Min nTPM: 72.7
Sample A Male 72.7
Sample B Male 75.8
Sample C Female 85.1
Sample D Female 79.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

1.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 1.5
71656904 Antisense, RP_050927_04_E05, Mouse strain C57BL/6J (56 days, male) 1.5
Pallidum
Expression energy: 1.5
71656904 Antisense, RP_050927_04_E05, Mouse strain C57BL/6J (56 days, male) 1.5

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