We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
863.8
nTPM
FANTOM5:
838.4
Scaled Tags Per Million
Pig:
85.4
nTPM
Allen mouse:
1.8
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
863.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 805.1
2188
Female, age 91, both hemispheres
1011.2
2090
Male, age 80, both hemispheres
927.0
2301
Female, age 85, both hemispheres
856.5
1984
Male, age 76, both hemispheres
425.8
Dorsal cochlear nucleus nTPM: 670.4
2187
Female, age 91, both hemispheres
809.6
2378
Male, age 80, both hemispheres
760.8
2370
Male, age 61, both hemispheres
608.0
2058
Male, age 76, both hemispheres
604.6
2802
Male, age 74, right hemisphere
569.1
Dorsal tegmental nucleus nTPM: 567.8
2083
Male, age 80, both hemispheres
824.5
2326
Male, age 74, both hemispheres
619.9
1936
Male, age 76, left hemisphere
431.9
2358
Male, age 61, both hemispheres
395.1
Dorsolateral tegmental area nTPM: 624.2
2751
Female, age 85, both hemispheres
961.7
2654
Male, age 80, both hemispheres
832.2
2337
Male, age 61, both hemispheres
606.4
2360
Male, age 74, both hemispheres
431.1
2141
Male, age 76, both hemispheres
289.6
Kolliker-Fuse nucleus nTPM: 702.3
2793
Female, age 91, left hemisphere
1000.8
2163
Male, age 80, both hemispheres
586.5
2315
Male, age 76, right hemisphere
519.6
Lateral lemniscal nuclei nTPM: 631.9
2320
Female, age 91, left hemisphere
781.8
2746
Female, age 85, left hemisphere
675.3
2036
Male, age 80, both hemispheres
643.4
2169
Male, age 76, both hemispheres
551.0
2453
Male, age 74, right hemisphere
508.1
Lateral parabrachial nucleus nTPM: 793.1
2792
Male, age 76, both hemispheres
1282.8
2013
Male, age 80, both hemispheres
800.3
2139
Female, age 85, right hemisphere
548.0
2790
Male, age 61, both hemispheres
541.5
Lateral vestibular nucleus nTPM: 609.6
2311
Male, age 80, both hemispheres
717.8
2184
Male, age 76, both hemispheres
501.4
Locus coeruleus nTPM: 338.3
2162
Male, age 80, both hemispheres
432.1
2720
Male, age 74, both hemispheres
394.6
2317
Female, age 72, unknown
367.3
2123
Female, age 91, both hemispheres
324.5
2788
Male, age 74, unknown
316.4
2014
Male, age 55, unknown
309.9
1980
Male, age 76, both hemispheres
223.1
Medial parabrachial nucleus nTPM: 702.5
2170
Female, age 91, both hemispheres
936.1
2463
Female, age 85, right hemisphere
799.5
2854
Male, age 80, both hemispheres
716.1
2786
Male, age 76, both hemispheres
575.2
2156
Male, age 61, both hemispheres
485.4
Medial periolivary nuclei nTPM: 655.6
2081
Male, age 80, both hemispheres
794.8
2791
Male, age 74, right hemisphere
730.8
2458
Female, age 91, both hemispheres
720.6
2063
Male, age 76, both hemispheres
644.8
2171
Female, age 85, both hemispheres
386.8
Motor facial nucleus nTPM: 658.6
2126
Male, age 61, both hemispheres
839.7
2697
Female, age 85, both hemispheres
786.1
2365
Male, age 74, right hemisphere
744.3
2795
Female, age 91, both hemispheres
601.4
2062
Male, age 76, both hemispheres
500.4
2327
Male, age 80, both hemispheres
479.7
Motor trigeminal nucleus nTPM: 593.3
2321
Female, age 91, both hemispheres
680.1
2560
Male, age 74, both hemispheres
664.2
2309
Male, age 76, both hemispheres
602.4
2079
Male, age 80, both hemispheres
520.0
2335
Male, age 61, both hemispheres
499.8
Nuclei of the trapezoid body nTPM: 569.4
2368
Female, age 91, both hemispheres
698.4
2166
Male, age 80, both hemispheres
670.7
1983
Male, age 76, both hemispheres
567.8
2159
Male, age 61, both hemispheres
564.8
2735
Female, age 85, both hemispheres
345.4
Nucleus raphe magnus nTPM: 546.8
2459
Female, age 91, both hemispheres
721.0
2051
Male, age 76, both hemispheres
694.7
2328
Male, age 80, both hemispheres
633.3
2455
Male, age 74, both hemispheres
559.3
2160
Male, age 61, both hemispheres
386.9
2172
Female, age 85, both hemispheres
285.4
Paramedian reticular nucleus nTPM: 721.5
2052
Male, age 76, both hemispheres
855.2
2057
Male, age 80, both hemispheres
810.1
2050
Female, age 85, both hemispheres
630.1
2313
Male, age 61, both hemispheres
590.7
Pedunculopontine tegmental nucleus nTPM: 551.8
2334
Male, age 80, both hemispheres
626.6
2338
Male, age 61, both hemispheres
545.1
1921
Female, age 85, both hemispheres
483.7
Pontine nuclei nTPM: 691.2
2454
Male, age 74, left hemisphere
1040.5
2319
Female, age 91, both hemispheres
897.9
2109
Female, age 72, unknown
795.3
2115
Male, age 80, left hemisphere
648.4
1968
Male, age 76, left hemisphere
622.1
1863
Male, age 55, unknown
608.3
2727
Male, age 61, right hemisphere
546.2
2787
Female, age 85, both hemispheres
370.5
Pontine raphe nucleus nTPM: 424.0
2853
Male, age 76, midline
429.4
2122
Female, age 85, midline
418.5
Posteroventral cochlear nucleus nTPM: 863.8
2135
Female, age 91, both hemispheres
1176.6
2341
Male, age 80, both hemispheres
1061.9
2070
Male, age 76, both hemispheres
835.6
2371
Male, age 61, both hemispheres
743.2
2752
Female, age 85, both hemispheres
501.5
Principal sensory trigeminal nucleus nTPM: 585.4
2367
Female, age 91, left hemisphere
933.9
2324
Male, age 76, both hemispheres
478.8
2008
Male, age 80, left hemisphere
465.0
2158
Male, age 61, both hemispheres
464.2
Reticular pontine nucleus, caudal nTPM: 717.5
2457
Female, age 91, both hemispheres
840.0
2559
Male, age 74, both hemispheres
833.0
2092
Male, age 76, both hemispheres
787.2
2332
Male, age 80, right hemisphere
409.7
Reticular pontine nucleus, oral nTPM: 824.0
2361
Male, age 74, both hemispheres
987.3
2366
Female, age 91, both hemispheres
940.0
1939
Male, age 80, both hemispheres
815.5
2167
Male, age 76, both hemispheres
707.6
2012
Female, age 85, both hemispheres
669.7
Reticulotegmental nucleus nTPM: 510.3
2322
Female, age 91, both hemispheres
627.8
2333
Male, age 80, both hemispheres
559.0
2452
Male, age 74, both hemispheres
538.6
2325
Male, age 76, both hemispheres
315.6
Spinal trigeminal nucleus, oral nTPM: 526.2
1978
Male, age 76, both hemispheres
580.3
2164
Male, age 80, both hemispheres
574.2
2737
Female, age 85, both hemispheres
424.1
Subcoeruleus area nTPM: 631.3
2369
Female, age 85, left hemisphere
1131.3
1958
Male, age 80, both hemispheres
603.6
2089
Male, age 76, left hemisphere
532.8
2451
Male, age 74, both hemispheres
458.8
2323
Female, age 91, left hemisphere
430.0
Superior olive nTPM: 725.6
2020
Male, age 76, both hemispheres
938.2
2364
Male, age 74, right hemisphere
833.3
2329
Male, age 80, right hemisphere
632.4
2561
Female, age 91, both hemispheres
625.8
1875
Female, age 85, both hemispheres
598.1
Ventral periolivary nuclei nTPM: 635.8
2023
Male, age 76, both hemispheres
1056.7
2165
Male, age 80, both hemispheres
546.6
2794
Female, age 91, left hemisphere
487.3
2130
Female, age 85, both hemispheres
452.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 702.5
2456
Female, age 91, both hemispheres
807.2
1959
Male, age 76, both hemispheres
753.3
2840
Female, age 85, both hemispheres
720.3
2359
Male, age 61, both hemispheres
711.3
2161
Male, age 80, both hemispheres
653.7
2449
Male, age 74, both hemispheres
569.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
85.4
Pig sample
Sample description
nTPM
Pons nTPM: 85.4
Samples: 4
Max nTPM: 104.7
Min nTPM: 66.5
Sample A
Female
66.5
Sample B
Female
79.1
Sample C
Male
91.4
Sample D
Male
104.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
