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TISSUE PRIMARY DATA VAGINA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Vagina
Tissue proteome
Vagina
VAGINA - Expression summary
Protein expression
Vaginai

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Squamous epithelial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:315.2 nTPM
GTEx:315.2 nTPM
FANTOM5:454.1 Scaled Tags Per Million

VAGINA - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA026494Antibody CAB001448
Squamous epithelial cells Not detectedNot detected





VAGINA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

315.2
GTEx sample id Sample description nTPM
Vagina
Average nTPM: 315.2
Samples: 156

Max nTPM: 816.5
Min nTPM: 150.7
Std nTPM: 105.8
Median nTPM: 295.9
GTEX-ZLWG-1126-SM-4WWFQ 50-59 years, female 816.5
GTEX-1AMFI-1526-SM-73KVY 50-59 years, female 678.4
GTEX-14BMU-1926-SM-5S2QC 20-29 years, female 559.5
GTEX-14JG6-0726-SM-69LQH 30-39 years, female 555.8
GTEX-X8HC-2826-SM-46MWJ 50-59 years, female 551.9
GTEX-1MCC2-1126-SM-EVYD6 30-39 years, female 551.7
GTEX-T6MO-1226-SM-4DM5S 40-49 years, female 520.6
GTEX-Q734-1426-SM-DTXFX 40-49 years, female 512.5
GTEX-13PL7-2726-SM-5L3GB 60-69 years, female 511.9
GTEX-ZZPU-2226-SM-5EGIV 50-59 years, female 508.8
GTEX-11I78-2026-SM-5987C 50-59 years, female 507.2
GTEX-14PN3-1626-SM-6AJAV 60-69 years, female 472.8
GTEX-SE5C-1126-SM-4BRWZ 40-49 years, female 466.0
GTEX-ZXES-0626-SM-5E45P 30-39 years, female 464.1
GTEX-1399S-2326-SM-5K7YV 30-39 years, female 458.6
GTEX-17F9Y-2326-SM-7DUFP 70-79 years, female 454.1
GTEX-13D11-1326-SM-5IJFY 50-59 years, female 449.1
GTEX-131XG-2126-SM-5DUXG 50-59 years, female 444.3
GTEX-1MCYP-1326-SM-EV7AD 20-29 years, female 439.5
GTEX-14PKU-1326-SM-6871B 40-49 years, female 437.6
GTEX-13QBU-1726-SM-5IJFQ 40-49 years, female 428.5
GTEX-1IE54-2626-SM-CMKFY 40-49 years, female 428.0
GTEX-S7SF-1426-SM-4AT5A 20-29 years, female 425.5
GTEX-1LGRB-2126-SM-COH48 50-59 years, female 424.1
GTEX-1LGOU-1126-SM-D3LAI 20-29 years, female 419.3
GTEX-1LVAN-1626-SM-CNPQ7 50-59 years, female 418.9
GTEX-11XUK-1326-SM-5EQM4 40-49 years, female 416.2
GTEX-1JMQL-2326-SM-CNNPV 50-59 years, female 414.6
GTEX-1HCU8-2026-SM-9YFLE 60-69 years, female 409.2
GTEX-1IDJU-1026-SM-AHZ2U 60-69 years, female 403.2
GTEX-ZYVF-0326-SM-5GIES 50-59 years, female 394.1
GTEX-1JN76-1526-SM-CNPPF 20-29 years, female 387.0
GTEX-ZV6S-1326-SM-59HJA 40-49 years, female 386.9
GTEX-PWCY-1726-SM-48TD3 20-29 years, female 380.6
GTEX-14PJ6-1626-SM-6872D 60-69 years, female 375.3
GTEX-S341-1226-SM-4AD5S 40-49 years, female 374.2
GTEX-1C475-0526-SM-793AC 40-49 years, female 374.0
GTEX-TML8-1126-SM-4DXSS 40-49 years, female 368.6
GTEX-11EM3-1826-SM-5A5KO 20-29 years, female 363.7
GTEX-1GN1W-1526-SM-7P8TG 50-59 years, female 362.9
GTEX-U3ZN-0926-SM-4DXTU 30-39 years, female 361.1
GTEX-Y114-1926-SM-4TT8J 50-59 years, female 357.8
GTEX-Y3IK-2226-SM-4YCD4 50-59 years, female 352.8
GTEX-146FR-2426-SM-5NQAU 60-69 years, female 351.7
GTEX-PWN1-2526-SM-48TDS 40-49 years, female 351.5
GTEX-14H4A-2426-SM-664OQ 40-49 years, female 349.4
GTEX-W5WG-1026-SM-4LMIF 50-59 years, female 349.1
GTEX-12WSD-2926-SM-5LZUH 60-69 years, female 348.9
GTEX-N7MT-1926-SM-3LK5N 60-69 years, female 347.5
GTEX-OHPK-2526-SM-3MJH9 50-59 years, female 343.9
GTEX-11VI4-0726-SM-5GU5B 40-49 years, female 343.7
GTEX-WEY5-0826-SM-4LMIH 40-49 years, female 338.5
GTEX-ZQG8-1126-SM-51MRL 60-69 years, female 335.5
GTEX-11DXX-1726-SM-5H11T 60-69 years, female 334.8
GTEX-S4P3-1126-SM-4AD52 50-59 years, female 333.3
GTEX-16NGA-1626-SM-72D6M 40-49 years, female 329.3
GTEX-XUW1-0326-SM-4BOOR 50-59 years, female 328.9
GTEX-113JC-1926-SM-5N9GE 50-59 years, female 327.7
GTEX-1LVAM-1926-SM-E6CIM 50-59 years, female 326.5
GTEX-RU1J-1426-SM-46MUV 20-29 years, female 325.7
GTEX-1I4MK-1726-SM-ARL7O 50-59 years, female 323.2
GTEX-ZVT2-0626-SM-5GICR 50-59 years, female 320.5
GTEX-15SDE-1726-SM-6LPJS 50-59 years, female 320.0
GTEX-PX3G-2526-SM-48TZV 20-29 years, female 320.0
GTEX-1QPFJ-1626-SM-DTX7X 30-39 years, female 316.8
GTEX-14A5I-2726-SM-5SIB3 50-59 years, female 316.2
GTEX-147F3-1526-SM-5SIAK 50-59 years, female 315.1
GTEX-1HCUA-1026-SM-A9SMI 50-59 years, female 314.7
GTEX-145ME-1426-SM-5RQJS 40-49 years, female 312.9
GTEX-1HCU6-2326-SM-ACKXP 60-69 years, female 312.9
GTEX-QVJO-2526-SM-CYPRA 60-69 years, female 309.9
GTEX-13PVR-1426-SM-5S2PW 60-69 years, female 308.4
GTEX-1LNCM-1026-SM-E9U5D 50-59 years, female 302.8
GTEX-ZAK1-2426-SM-EXOHM 50-59 years, female 300.9
GTEX-1F5PL-1826-SM-7P8PP 40-49 years, female 300.3
GTEX-13U4I-2026-SM-5LU3L 40-49 years, female 300.1
GTEX-1CAMS-2326-SM-793CR 40-49 years, female 298.2
GTEX-1399U-1526-SM-5J2N7 50-59 years, female 295.9
GTEX-TMMY-1926-SM-4DXUU 40-49 years, female 295.8
GTEX-14PJM-2926-SM-69LOE 50-59 years, female 294.0
GTEX-ZP4G-0826-SM-4WWF3 20-29 years, female 292.1
GTEX-11EMC-1926-SM-5A5JU 60-69 years, female 290.4
GTEX-P78B-2226-SM-3P5ZZ 40-49 years, female 287.8
GTEX-ZGAY-2226-SM-4YCCX 40-49 years, female 285.3
GTEX-1I1GT-1226-SM-B2LVK 60-69 years, female 282.3
GTEX-UJHI-1326-SM-4IHJO 50-59 years, female 280.1
GTEX-13W3W-2326-SM-5LU4Y 60-69 years, female 278.8
GTEX-ZTPG-2226-SM-57WF9 20-29 years, female 278.2
GTEX-16NPV-2526-SM-6M483 50-59 years, female 277.8
GTEX-14AS3-1726-SM-5RQJV 40-49 years, female 276.7
GTEX-1GN1U-2426-SM-9KNTU 50-59 years, female 275.7
GTEX-TSE9-2526-SM-4DXUS 60-69 years, female 274.4
GTEX-13OVI-0926-SM-5J1MI 60-69 years, female 272.2
GTEX-S4UY-1326-SM-4AD4X 40-49 years, female 270.2
GTEX-145LS-2526-SM-5TDC9 60-69 years, female 269.2
GTEX-1QP28-1426-SM-EVR4E 50-59 years, female 267.9
GTEX-1PIEJ-1926-SM-EVYB7 20-29 years, female 267.7
GTEX-1GMR8-2526-SM-7RHI9 50-59 years, female 265.3
GTEX-15ER7-2526-SM-7KUFW 20-29 years, female 265.2
GTEX-1JN1M-2326-SM-ARZNG 60-69 years, female 264.3
GTEX-15UF6-2126-SM-6M46Z 70-79 years, female 264.1
GTEX-18A7A-2826-SM-7LT8J 50-59 years, female 263.3
GTEX-18D9A-1026-SM-7KFRU 30-39 years, female 263.1
GTEX-RWS6-1726-SM-47JXP 60-69 years, female 263.1
GTEX-15SB6-1426-SM-7KUEM 50-59 years, female 262.5
GTEX-146FH-2626-SM-5Q5E1 50-59 years, female 260.4
GTEX-QCQG-1226-SM-48U23 50-59 years, female 259.6
GTEX-1R9JW-1426-SM-DTX9K 30-39 years, female 259.2
GTEX-1F48J-2526-SM-7P8TU 50-59 years, female 258.8
GTEX-ZYY3-2626-SM-5N9DH 60-69 years, female 258.5
GTEX-11GSP-2226-SM-5HL5Q 60-69 years, female 255.7
GTEX-PLZ4-2726-SM-3P61A 50-59 years, female 255.5
GTEX-12ZZX-1926-SM-5EGKC 40-49 years, female 254.4
GTEX-WYVS-1426-SM-4ONCV 40-49 years, female 253.3
GTEX-1S5ZU-2626-SM-E9TII 20-29 years, female 252.9
GTEX-15SHU-2926-SM-7KUKT 40-49 years, female 251.3
GTEX-1QCLZ-2226-SM-DTX7R 60-69 years, female 246.4
GTEX-1HFI7-1126-SM-A96S5 50-59 years, female 244.4
GTEX-YJ8O-1226-SM-5P9JE 40-49 years, female 241.6
GTEX-XUZC-1226-SM-4BRVJ 30-39 years, female 241.6
GTEX-183WM-2126-SM-7LG4I 70-79 years, female 237.8
GTEX-12WSJ-1326-SM-5GCOB 40-49 years, female 230.4
GTEX-13N11-1526-SM-5L3FL 50-59 years, female 228.0
GTEX-1NUQO-1826-SM-E6CQU 20-29 years, female 227.5
GTEX-1HBPM-2726-SM-9WYUA 60-69 years, female 225.1
GTEX-ZC5H-2226-SM-4WAWS 40-49 years, female 223.1
GTEX-15DYW-2926-SM-6PANA 60-69 years, female 222.3
GTEX-1J1OQ-1826-SM-CL53R 40-49 years, female 222.3
GTEX-1EWIQ-2326-SM-7IGNF 70-79 years, female 220.5
GTEX-ZE7O-2426-SM-57WD7 50-59 years, female 220.5
GTEX-OHPL-2526-SM-3MJGT 60-69 years, female 215.4
GTEX-XV7Q-1626-SM-4BRWC 40-49 years, female 214.6
GTEX-WRHU-2926-SM-4MVNQ 50-59 years, female 214.2
GTEX-14DAQ-2326-SM-5S2QX 60-69 years, female 213.5
GTEX-1ICG6-1626-SM-ARL81 70-79 years, female 213.0
GTEX-13QIC-1826-SM-5J1MY 60-69 years, female 208.3
GTEX-QDT8-2526-SM-48TYX 30-39 years, female 206.7
GTEX-NPJ7-2526-SM-EV79A 60-69 years, female 206.7
GTEX-11TTK-2726-SM-5GU58 60-69 years, female 203.8
GTEX-T2IS-1926-SM-4DM74 20-29 years, female 201.0
GTEX-11P81-2126-SM-5HL6N 30-39 years, female 200.8
GTEX-ZVT3-2726-SM-5GU5X 60-69 years, female 199.2
GTEX-X15G-1926-SM-4PQZQ 50-59 years, female 194.0
GTEX-YFC4-2926-SM-5IFJ8 40-49 years, female 193.6
GTEX-1HBPH-2926-SM-9WPNX 40-49 years, female 192.5
GTEX-1GF9U-1926-SM-7P8TZ 40-49 years, female 187.8
GTEX-Y8LW-1426-SM-5RQJJ 50-59 years, female 185.5
GTEX-131YS-2426-SM-5J2OD 60-69 years, female 180.9
GTEX-1A8FM-2426-SM-7IGPE 50-59 years, female 178.7
GTEX-OHPN-2426-SM-E9TI5 60-69 years, female 173.4
GTEX-17JCI-2526-SM-7DHLB 60-69 years, female 171.3
GTEX-1LH75-1726-SM-DHXKZ 50-59 years, female 166.8
GTEX-P4PP-2526-SM-3P61P 30-39 years, female 165.8
GTEX-1117F-2526-SM-5GZY6 60-69 years, female 159.5
GTEX-SN8G-2626-SM-EXUQT 50-59 years, female 153.8
GTEX-1J8EW-2526-SM-CKZO2 60-69 years, female 150.7
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VAGINA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

454.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Vagina
Scaled Tags Per Million: 454.1
FF:10204-103F6 68 years, female 454.1

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