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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:126.1 nTPM
HPA Brain:123.1 nTPM
GTEx:126.1 nTPM
FANTOM5:220.6 Scaled Tags Per Million
Pig:74.9 nTPM
Mouse:124.1 nTPM
Allen mouse:10.0 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045028
Glial cells High
Neuronal cells High



BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

123.1
Sample id Sample description nTPM
Caudate nucleus
nTPM: 116.5
1857 Female, age 85, left hemisphere 127.5
2290 Female, age 72, unknown 120.9
2481 Female, age 94, left hemisphere 120.6
2288 Male, age 75, left hemisphere 115.8
1781 Male, age 74, unknown 114.3
2846 Female, age 79, unknown 113.6
2289 Male, age 61, right hemisphere 111.6
1854 Male, age 80, left hemisphere 107.6
Globus pallidus, externus
nTPM: 121.4
1996 Male, age 80, right hemisphere 138.5
2395 Male, age 75, both hemispheres 124.7
2646 Male, age 61, right hemisphere 124.3
2772 Female, age 79, unknown 111.2
2567 Female, age 72, unknown 108.2
Globus pallidus, internus
nTPM: 123.1
2778 Female, age 91, both hemispheres 132.5
2287 Male, age 75, right hemisphere 131.8
2037 Male, age 80, right hemisphere 130.0
2566 Female, age 72, unknown 128.8
2483 Female, age 94, right hemisphere 125.0
1818 Male, age 74, unknown 108.1
2111 Female, age 85, right hemisphere 105.4
Nucleus accumbens
nTPM: 112.9
1783 Male, age 74, unknown 123.9
1806 Female, age 85, left hemisphere 122.8
2698 Female, age 72, unknown 116.4
2286 Male, age 75, left hemisphere 115.0
2391 Female, age 94, left hemisphere 109.8
1856 Female, age 91, right hemisphere 109.4
2732 Male, age 80, right hemisphere 103.3
2824 Male, age 61, right hemisphere 102.9
Nucleus basalis of Meynert
nTPM: 111.2
2569 Male, age 61, both hemispheres 135.0
2821 Male, age 75, both hemispheres 113.2
2393 Male, age 80, right hemisphere 100.9
2484 Female, age 94, left hemisphere 95.7
Nucleus of the diagonal band
nTPM: 98.5
1812 Female, age 91, both hemispheres 103.2
2029 Male, age 61, right hemisphere 99.8
1979 Male, age 74, unknown 98.4
2775 Male, age 80, right hemisphere 98.0
2195 Female, age 85, both hemispheres 93.2
Putamen
nTPM: 110.0
1829 Male, age 74, unknown 127.6
1838 Male, age 80, right hemisphere 115.3
2647 Male, age 75, left hemisphere 113.0
2466 Female, age 79, unknown 109.6
1937 Female, age 91, right hemisphere 108.0
2482 Female, age 94, left hemisphere 100.2
2489 Female, age 72, unknown 96.0
Septal nuclei
nTPM: 99.1
2031 Female, age 72, unknown 111.5
1960 Male, age 74, unknown 102.2
2629 Female, age 94, right hemisphere 100.3
2059 Female, age 85, both hemispheres 97.2
2009 Female, age 91, both hemispheres 95.3
2394 Male, age 61, left hemisphere 93.6
2199 Male, age 80, right hemisphere 93.4
Stria terminalis, bed nucleus
nTPM: 89.6
1974 Female, age 91, both hemispheres 98.1
2201 Male, age 74, unknown 85.8
2486 Female, age 94, both hemispheres 84.8

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

126.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 117.1
Samples: 246

Max nTPM: 179.8
Min nTPM: 77.0
Std nTPM: 17.0
Median nTPM: 114.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 179.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 169.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 167.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 164.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 162.9
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 157.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 156.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 156.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 154.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 153.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 152.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 151.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 151.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 151.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 148.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 148.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 147.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 146.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 144.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 143.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 143.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 142.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 142.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 141.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 141.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 141.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 140.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 139.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 139.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 138.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 138.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 138.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 135.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 135.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 135.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 134.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 134.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 133.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 133.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 133.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 131.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 131.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 130.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 130.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 129.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 129.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 129.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 129.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 129.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 128.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 128.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 128.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 128.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 127.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 127.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 127.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 127.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 126.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 126.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 125.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 125.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 125.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 125.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 125.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 125.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 124.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 124.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 124.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 124.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 124.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 123.8
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 123.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 123.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 123.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 122.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 122.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 122.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 122.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 122.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 122.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 122.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 122.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 122.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 122.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 122.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 121.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 121.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 121.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 120.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 120.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 120.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 120.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 120.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 119.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 118.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 118.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 118.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 118.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 118.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 118.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 118.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 117.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 117.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 117.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 117.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 117.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 117.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 117.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 116.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 116.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 116.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 116.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 116.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 116.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 116.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 115.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 115.8
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 115.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 115.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 115.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 115.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 114.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 114.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 114.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 114.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 114.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 114.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 114.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 113.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 113.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 113.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 113.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 113.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 113.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 112.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 112.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 112.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 112.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 111.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 111.8
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 111.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 110.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 110.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 110.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 110.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 110.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 110.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 110.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 110.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 110.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 110.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 110.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 110.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 110.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 109.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 109.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 109.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 109.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 109.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 109.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 109.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 109.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 108.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 108.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 107.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 107.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 107.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 107.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 107.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 107.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 107.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 107.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 107.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 106.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 106.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 106.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 106.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 106.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 106.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 106.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 105.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 105.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 105.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 105.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 105.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 105.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 105.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 105.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 104.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 104.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 104.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 104.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 104.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 104.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 103.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 103.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 103.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 103.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 103.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 102.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 102.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 102.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 102.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 101.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 101.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 101.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 101.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 101.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 101.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 101.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 101.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 100.9
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 100.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 99.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 99.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 99.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 98.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 98.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 98.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 97.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 97.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 97.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 97.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 97.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 95.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 95.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 95.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 95.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 95.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 94.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 93.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 93.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 93.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 93.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 93.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 92.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 91.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 91.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 91.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 91.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 89.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 87.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 85.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 80.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 77.0
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 112.1
Samples: 246

Max nTPM: 183.7
Min nTPM: 79.1
Std nTPM: 17.8
Median nTPM: 108.9
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 183.7
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 177.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 165.8
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 161.3
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 160.5
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 156.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 156.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 150.6
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 149.8
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 149.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 147.3
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 145.1
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 145.1
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 143.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 143.2
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 142.9
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 142.0
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 140.1
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 139.8
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 139.7
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 139.3
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 138.2
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 137.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 137.1
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 134.3
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 133.4
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 132.9
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 132.6
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 132.5
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 132.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 132.2
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 132.2
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 131.5
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 131.5
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 131.4
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 130.7
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 130.0
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 129.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 129.2
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 128.1
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 128.1
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 127.9
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 127.6
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 127.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 127.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 127.0
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 126.8
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 126.4
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 126.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 126.0
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 125.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 125.3
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 124.8
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 124.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 124.7
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 124.5
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 124.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 123.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 123.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 123.4
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 123.0
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 122.7
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 122.6
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 122.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 122.3
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 122.2
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 122.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 121.4
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 121.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 121.1
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 120.9
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 120.8
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 120.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 119.5
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 119.2
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 118.9
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 118.8
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 118.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 118.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 117.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 117.8
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 117.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 117.0
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 116.9
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 116.9
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 116.8
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 116.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 116.4
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 115.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 115.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 115.3
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 115.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 115.0
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 114.7
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 114.7
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 114.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 114.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 114.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 114.1
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 113.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 113.2
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 113.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 112.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 112.8
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 112.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 112.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 111.7
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 111.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 111.5
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 111.5
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 111.4
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 111.4
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 111.4
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 110.9
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 110.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 110.8
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 110.8
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 110.6
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 110.5
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 110.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 109.4
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 109.1
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 108.9
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 108.9
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 108.3
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 108.2
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 108.1
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 108.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 107.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 107.7
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 107.2
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 107.0
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 107.0
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 106.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 106.6
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 106.6
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 106.4
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 106.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 106.1
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 105.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 105.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 105.8
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 105.8
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 105.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 105.5
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 105.1
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 105.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 104.7
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 104.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 104.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 104.2
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 104.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 104.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 103.9
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 103.9
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 103.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 103.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 103.4
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 103.3
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 103.1
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 102.9
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 102.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 102.7
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 102.4
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 102.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 102.1
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 102.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 101.9
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 101.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 101.5
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 101.4
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 101.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 100.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 100.4
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 100.3
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 100.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 100.1
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 100.1
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 99.8
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 99.7
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 99.5
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 99.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 99.1
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 98.8
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 98.8
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 98.6
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 98.5
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 98.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 98.5
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 98.2
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 98.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 98.1
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 97.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 97.8
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 97.7
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 97.5
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 97.4
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 97.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 96.6
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 96.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 96.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 96.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 95.6
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 95.6
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 95.6
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 95.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 95.4
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 95.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 95.0
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 94.4
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 94.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 94.0
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 93.9
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 93.2
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 93.2
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 93.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 92.7
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 92.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 92.0
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 91.9
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 91.9
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 91.7
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 90.9
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 90.4
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 90.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 90.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 90.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 89.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 89.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 89.6
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 89.6
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 89.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 89.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 89.0
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 88.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 88.7
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 88.7
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 88.3
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 87.8
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 87.1
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 85.8
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 85.2
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 85.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 84.9
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 84.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 79.1
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Brain - Putamen (basal ganglia)
Average nTPM: 126.1
Samples: 205

Max nTPM: 183.6
Min nTPM: 85.7
Std nTPM: 20.3
Median nTPM: 124.6
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 183.6
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 183.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 180.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 180.8
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 178.0
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 173.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 171.0
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 168.6
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 165.7
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 165.0
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 163.8
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 162.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 161.7
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 161.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 161.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 160.7
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 160.5
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 156.2
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 155.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 155.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 155.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 153.6
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 153.6
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 153.4
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 153.1
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 152.1
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 151.1
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 150.5
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 150.4
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 149.0
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 148.8
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 148.1
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 147.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 146.5
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 146.2
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 146.1
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 145.2
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 144.8
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 144.1
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 143.6
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 143.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 141.8
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 141.4
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 141.2
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 140.4
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 140.4
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 140.3
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 140.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 138.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 138.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 138.4
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 138.0
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 137.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 137.2
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 137.1
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 136.8
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 136.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 135.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 134.6
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 134.6
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 134.3
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 134.2
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 134.1
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 133.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 133.0
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 132.5
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 132.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 131.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 131.0
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 130.4
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 130.0
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 129.7
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 129.6
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 129.6
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 129.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 129.4
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 129.3
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 129.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 129.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 128.3
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 128.3
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 128.0
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 127.9
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 127.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 127.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 127.3
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 127.1
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 126.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 126.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 126.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 126.1
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 125.9
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 125.9
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 125.8
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 125.7
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 125.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 125.7
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 125.2
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 125.0
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 124.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 124.7
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 124.6
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 124.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 124.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 124.2
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 124.0
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 123.4
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 123.2
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 123.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 122.7
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 122.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 122.0
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 121.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 121.4
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 121.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 120.6
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 120.3
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 119.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 119.3
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 119.2
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 118.9
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 118.0
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 117.7
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 117.6
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 117.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 117.2
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 117.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 116.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 116.8
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 116.5
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 116.3
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 116.3
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 116.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 116.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 116.0
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 115.8
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 115.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 115.6
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 115.5
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 115.3
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 115.3
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 115.1
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 114.9
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 114.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 113.2
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 113.0
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 112.6
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 112.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 112.4
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 112.2
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 112.2
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 111.9
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 111.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 111.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 111.6
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 111.2
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 111.1
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 111.0
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 110.8
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 110.5
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 110.0
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 109.6
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 109.2
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 108.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 108.4
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 108.4
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 108.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 107.9
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 107.4
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 106.2
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 106.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 105.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 105.0
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 104.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 104.4
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 103.8
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 103.7
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 103.2
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 103.1
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 103.1
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 102.9
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 102.8
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 102.3
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 101.5
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 100.3
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 100.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 99.9
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 99.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 99.6
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 99.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 99.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 99.1
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 98.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 98.5
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 98.1
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 98.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 97.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 97.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 97.0
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 94.7
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 94.6
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 94.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 94.4
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 91.9
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 85.7
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

220.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 175.6
FF:10164-103B2 76 years, female 175.6
Nucleus accumbens
Scaled Tags Per Million: 220.6
FF:10037-101F1 23-56 years, mixed 220.6
Putamen
Scaled Tags Per Million: 216.1
FF:10176-103C5 60 years, female 216.1
Globus pallidus
Scaled Tags Per Million: 174.5
FF:10161-103A8 76 years, female 199.1
FF:10175-103C4 60 years, female 149.8

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

74.9
Pig sample Sample description nTPM
Caudate
nTPM: 68.9
Samples: 4

Max nTPM: 79.9
Min nTPM: 60.7
Sample A Female 62.3
Sample B Female 72.8
Sample C Male 79.9
Sample D Male 60.7
Putamen
nTPM: 75.0
Samples: 4

Max nTPM: 88.7
Min nTPM: 62.2
Sample A Female 71.2
Sample B Female 62.2
Sample C Male 88.7
Sample D Male 77.8
Septum
nTPM: 69.4
Samples: 4

Max nTPM: 72.9
Min nTPM: 63.7
Sample A Female 71.7
Sample B Female 63.7
Sample C Male 72.9
Sample D Male 69.1
Ventral pallidum
nTPM: 69.0
Samples: 4

Max nTPM: 73.7
Min nTPM: 60.4
Sample A Female 60.4
Sample B Female 72.8
Sample C Male 73.7
Sample D Male 69.2

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

124.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 118.2
Samples: 4

Max nTPM: 127.0
Min nTPM: 109.4
Sample A Male 127.0
Sample B Male 122.5
Sample C Female 109.4
Sample D Female 114.0
Septum
nTPM: 124.2
Samples: 4

Max nTPM: 132.5
Min nTPM: 117.4
Sample A Male 132.5
Sample B Male 118.6
Sample C Female 117.4
Sample D Female 128.1
Ventral forebrain
nTPM: 120.9
Samples: 4

Max nTPM: 123.0
Min nTPM: 117.4
Sample A Male 123.0
Sample B Male 120.9
Sample C Female 117.4
Sample D Female 122.2

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

10.0
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 10.0
74988735 Antisense, RP_060315_04_B03, Mouse strain C57BL/6J (56 days, male) 10.4
70593345 Antisense, RP_050407_04_A05, Mouse strain C57BL/6J (56 days, male) 9.5
Pallidum
Expression energy: 8.2
74988735 Antisense, RP_060315_04_B03, Mouse strain C57BL/6J (56 days, male) 8.6
70593345 Antisense, RP_050407_04_A05, Mouse strain C57BL/6J (56 days, male) 7.9

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