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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
339.9
nTPM
FANTOM5:
655.8
Scaled Tags Per Million
Pig:
216.3
nTPM
Allen mouse:
6.3
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
339.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 233.5
2188
Female, age 91, both hemispheres
260.5
2090
Male, age 80, both hemispheres
251.4
2301
Female, age 85, both hemispheres
235.3
1984
Male, age 76, both hemispheres
186.8
Dorsal cochlear nucleus nTPM: 259.8
2187
Female, age 91, both hemispheres
301.5
2370
Male, age 61, both hemispheres
299.8
2378
Male, age 80, both hemispheres
242.0
2058
Male, age 76, both hemispheres
232.9
2802
Male, age 74, right hemisphere
223.0
Dorsal tegmental nucleus nTPM: 297.5
2326
Male, age 74, both hemispheres
311.5
2083
Male, age 80, both hemispheres
298.5
2358
Male, age 61, both hemispheres
292.8
1936
Male, age 76, left hemisphere
287.2
Dorsolateral tegmental area nTPM: 313.6
2360
Male, age 74, both hemispheres
386.2
2751
Female, age 85, both hemispheres
311.1
2654
Male, age 80, both hemispheres
298.9
2141
Male, age 76, both hemispheres
287.4
2337
Male, age 61, both hemispheres
284.6
Kolliker-Fuse nucleus nTPM: 315.9
2163
Male, age 80, both hemispheres
366.4
2315
Male, age 76, right hemisphere
293.9
2793
Female, age 91, left hemisphere
287.5
Lateral lemniscal nuclei nTPM: 275.7
2169
Male, age 76, both hemispheres
323.7
2036
Male, age 80, both hemispheres
320.0
2746
Female, age 85, left hemisphere
264.2
2453
Male, age 74, right hemisphere
238.9
2320
Female, age 91, left hemisphere
231.9
Lateral parabrachial nucleus nTPM: 287.8
2139
Female, age 85, right hemisphere
307.0
2013
Male, age 80, both hemispheres
303.5
2792
Male, age 76, both hemispheres
274.1
2790
Male, age 61, both hemispheres
266.8
Lateral vestibular nucleus nTPM: 315.8
2184
Male, age 76, both hemispheres
348.8
2311
Male, age 80, both hemispheres
282.8
Locus coeruleus nTPM: 339.9
2014
Male, age 55, unknown
402.7
2123
Female, age 91, both hemispheres
391.7
2788
Male, age 74, unknown
355.6
1980
Male, age 76, both hemispheres
331.5
2317
Female, age 72, unknown
311.5
2720
Male, age 74, both hemispheres
307.7
2162
Male, age 80, both hemispheres
278.7
Medial parabrachial nucleus nTPM: 299.6
2170
Female, age 91, both hemispheres
355.8
2854
Male, age 80, both hemispheres
322.1
2156
Male, age 61, both hemispheres
293.8
2786
Male, age 76, both hemispheres
283.3
2463
Female, age 85, right hemisphere
242.9
Medial periolivary nuclei nTPM: 284.2
2791
Male, age 74, right hemisphere
430.8
2063
Male, age 76, both hemispheres
302.1
2171
Female, age 85, both hemispheres
275.6
2081
Male, age 80, both hemispheres
213.7
2458
Female, age 91, both hemispheres
198.7
Motor facial nucleus nTPM: 284.2
2365
Male, age 74, right hemisphere
422.1
2062
Male, age 76, both hemispheres
321.0
2126
Male, age 61, both hemispheres
276.9
2697
Female, age 85, both hemispheres
256.2
2795
Female, age 91, both hemispheres
225.7
2327
Male, age 80, both hemispheres
203.6
Motor trigeminal nucleus nTPM: 257.2
2309
Male, age 76, both hemispheres
290.9
2560
Male, age 74, both hemispheres
272.6
2335
Male, age 61, both hemispheres
266.2
2079
Male, age 80, both hemispheres
244.9
2321
Female, age 91, both hemispheres
211.4
Nuclei of the trapezoid body nTPM: 271.0
1983
Male, age 76, both hemispheres
328.2
2159
Male, age 61, both hemispheres
304.4
2735
Female, age 85, both hemispheres
287.3
2166
Male, age 80, both hemispheres
241.3
2368
Female, age 91, both hemispheres
193.9
Nucleus raphe magnus nTPM: 278.9
2455
Male, age 74, both hemispheres
380.7
2160
Male, age 61, both hemispheres
320.9
2051
Male, age 76, both hemispheres
264.4
2172
Female, age 85, both hemispheres
258.0
2328
Male, age 80, both hemispheres
242.3
2459
Female, age 91, both hemispheres
207.0
Paramedian reticular nucleus nTPM: 320.5
2050
Female, age 85, both hemispheres
330.8
2057
Male, age 80, both hemispheres
330.6
2313
Male, age 61, both hemispheres
314.0
2052
Male, age 76, both hemispheres
306.4
Pedunculopontine tegmental nucleus nTPM: 319.6
1921
Female, age 85, both hemispheres
324.7
2334
Male, age 80, both hemispheres
321.0
2338
Male, age 61, both hemispheres
313.1
Pontine nuclei nTPM: 317.1
2454
Male, age 74, left hemisphere
400.6
1863
Male, age 55, unknown
391.4
2109
Female, age 72, unknown
352.5
2787
Female, age 85, both hemispheres
316.2
2727
Male, age 61, right hemisphere
309.2
1968
Male, age 76, left hemisphere
281.3
2319
Female, age 91, both hemispheres
275.1
2115
Male, age 80, left hemisphere
210.7
Pontine raphe nucleus nTPM: 320.1
2853
Male, age 76, midline
332.3
2122
Female, age 85, midline
307.8
Posteroventral cochlear nucleus nTPM: 267.2
2752
Female, age 85, both hemispheres
302.8
2371
Male, age 61, both hemispheres
293.7
2070
Male, age 76, both hemispheres
258.8
2135
Female, age 91, both hemispheres
240.7
2341
Male, age 80, both hemispheres
239.9
Principal sensory trigeminal nucleus nTPM: 292.0
2324
Male, age 76, both hemispheres
336.4
2158
Male, age 61, both hemispheres
286.6
2008
Male, age 80, left hemisphere
283.7
2367
Female, age 91, left hemisphere
261.1
Reticular pontine nucleus, caudal nTPM: 257.7
2559
Male, age 74, both hemispheres
307.0
2092
Male, age 76, both hemispheres
294.2
2457
Female, age 91, both hemispheres
225.5
2332
Male, age 80, right hemisphere
203.9
Reticular pontine nucleus, oral nTPM: 325.8
2361
Male, age 74, both hemispheres
388.5
1939
Male, age 80, both hemispheres
340.3
2012
Female, age 85, both hemispheres
319.9
2167
Male, age 76, both hemispheres
311.7
2366
Female, age 91, both hemispheres
268.4
Reticulotegmental nucleus nTPM: 257.5
2325
Male, age 76, both hemispheres
301.2
2322
Female, age 91, both hemispheres
254.9
2333
Male, age 80, both hemispheres
238.0
2452
Male, age 74, both hemispheres
235.9
Spinal trigeminal nucleus, oral nTPM: 284.4
2737
Female, age 85, both hemispheres
295.2
1978
Male, age 76, both hemispheres
284.6
2164
Male, age 80, both hemispheres
273.3
Subcoeruleus area nTPM: 282.8
2323
Female, age 91, left hemisphere
331.8
1958
Male, age 80, both hemispheres
320.0
2369
Female, age 85, left hemisphere
287.4
2089
Male, age 76, left hemisphere
241.4
2451
Male, age 74, both hemispheres
233.2
Superior olive nTPM: 304.4
2364
Male, age 74, right hemisphere
472.5
1875
Female, age 85, both hemispheres
337.7
2020
Male, age 76, both hemispheres
289.9
2329
Male, age 80, right hemisphere
223.5
2561
Female, age 91, both hemispheres
198.6
Ventral periolivary nuclei nTPM: 265.6
2130
Female, age 85, both hemispheres
298.1
2023
Male, age 76, both hemispheres
293.9
2165
Male, age 80, both hemispheres
269.2
2794
Female, age 91, left hemisphere
201.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 274.5
2359
Male, age 61, both hemispheres
315.6
2449
Male, age 74, both hemispheres
297.0
2840
Female, age 85, both hemispheres
295.5
1959
Male, age 76, both hemispheres
286.2
2161
Male, age 80, both hemispheres
232.5
2456
Female, age 91, both hemispheres
220.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
216.3
Pig sample
Sample description
nTPM
Pons nTPM: 216.4
Samples: 4
Max nTPM: 283.3
Min nTPM: 169.4
Sample A
Female
206.5
Sample B
Female
169.4
Sample C
Male
206.2
Sample D
Male
283.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
