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BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA
MIDBRAIN OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
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VALIDATION
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:72.1 nTPM
HPA Brain:95.3 nTPM
GTEx:72.1 nTPM
FANTOM5:177.2 Scaled Tags Per Million
Pig:65.1 nTPM
Mouse:62.6 nTPM
Allen mouse:4.8 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA040870Antibody CAB034261
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

95.3
Sample id Sample description nTPM
Caudate nucleus
nTPM: 95.2
2481 Female, age 94, left hemisphere 121.2
1781 Male, age 74, unknown 102.6
2846 Female, age 79, unknown 96.2
2288 Male, age 75, left hemisphere 93.0
1857 Female, age 85, left hemisphere 90.4
2290 Female, age 72, unknown 89.2
2289 Male, age 61, right hemisphere 85.9
1854 Male, age 80, left hemisphere 83.4
Globus pallidus, externus
nTPM: 91.3
2772 Female, age 79, unknown 125.0
2395 Male, age 75, both hemispheres 110.0
1996 Male, age 80, right hemisphere 93.9
2646 Male, age 61, right hemisphere 74.4
2567 Female, age 72, unknown 53.1
Globus pallidus, internus
nTPM: 95.3
2287 Male, age 75, right hemisphere 142.7
2483 Female, age 94, right hemisphere 102.8
2778 Female, age 91, both hemispheres 100.6
1818 Male, age 74, unknown 97.7
2037 Male, age 80, right hemisphere 86.5
2111 Female, age 85, right hemisphere 68.4
2566 Female, age 72, unknown 68.0
Nucleus accumbens
nTPM: 90.6
1856 Female, age 91, right hemisphere 112.6
2391 Female, age 94, left hemisphere 109.0
2286 Male, age 75, left hemisphere 100.1
1783 Male, age 74, unknown 95.9
2698 Female, age 72, unknown 87.8
1806 Female, age 85, left hemisphere 83.5
2824 Male, age 61, right hemisphere 79.0
2732 Male, age 80, right hemisphere 56.6
Nucleus basalis of Meynert
nTPM: 75.3
2821 Male, age 75, both hemispheres 88.3
2569 Male, age 61, both hemispheres 73.0
2393 Male, age 80, right hemisphere 72.1
2484 Female, age 94, left hemisphere 67.9
Nucleus of the diagonal band
nTPM: 85.1
1812 Female, age 91, both hemispheres 117.5
2775 Male, age 80, right hemisphere 95.4
2029 Male, age 61, right hemisphere 78.2
2195 Female, age 85, both hemispheres 71.1
1979 Male, age 74, unknown 63.5
Putamen
nTPM: 87.4
2466 Female, age 79, unknown 100.9
2482 Female, age 94, left hemisphere 98.6
1829 Male, age 74, unknown 98.2
1838 Male, age 80, right hemisphere 94.7
1937 Female, age 91, right hemisphere 94.1
2647 Male, age 75, left hemisphere 69.5
2489 Female, age 72, unknown 55.5
Septal nuclei
nTPM: 84.1
2031 Female, age 72, unknown 114.7
2629 Female, age 94, right hemisphere 107.9
2009 Female, age 91, both hemispheres 87.4
1960 Male, age 74, unknown 84.9
2394 Male, age 61, left hemisphere 70.5
2199 Male, age 80, right hemisphere 65.7
2059 Female, age 85, both hemispheres 57.7
Stria terminalis, bed nucleus
nTPM: 89.4
1974 Female, age 91, both hemispheres 105.1
2486 Female, age 94, both hemispheres 92.6
2201 Male, age 74, unknown 70.4

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 72.1
Samples: 246

Max nTPM: 107.9
Min nTPM: 45.2
Std nTPM: 12.6
Median nTPM: 71.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 107.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 106.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 102.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 101.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 100.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 100.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 100.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 98.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 97.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 97.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 97.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 96.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 96.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 96.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 93.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 91.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 91.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 91.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 90.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 90.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 89.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 89.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 88.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 88.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 88.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 88.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 88.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 87.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 87.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 87.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 87.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 87.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 87.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 87.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 87.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 86.9
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 86.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 86.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 86.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 85.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 85.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 85.3
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 84.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 84.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 83.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 83.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 83.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 82.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 82.4
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 82.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 81.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 81.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 81.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 81.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 81.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 80.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 80.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 80.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 80.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 80.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 80.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 79.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 79.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 79.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 79.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 79.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 78.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 78.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 78.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 78.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 78.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 78.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 78.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 78.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 78.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 77.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 77.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 77.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 77.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 77.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 77.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 77.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 77.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 76.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 76.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 76.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 76.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 76.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 76.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 76.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 75.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 75.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 75.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 75.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 74.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 74.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 74.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 74.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 74.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 74.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 74.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 73.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 73.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 73.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 73.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 73.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 73.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 73.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 73.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 73.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 72.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 72.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 72.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 72.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 72.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 71.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 71.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 71.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 71.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 71.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 71.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 71.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 71.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 71.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 70.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 70.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 70.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 70.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 69.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 69.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 69.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 69.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 69.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 69.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 69.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 68.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 68.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 68.6
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 68.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 68.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 68.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 68.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 68.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 68.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 68.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 68.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 67.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 67.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 67.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 67.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 67.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 66.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 66.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 66.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 66.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 66.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 66.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 65.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 65.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 65.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 65.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 65.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 65.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 65.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 65.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 65.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 64.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 64.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 64.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 63.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 63.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 63.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 63.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 63.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 63.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 63.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 62.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 62.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 62.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 62.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 62.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 62.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 62.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 62.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 62.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 62.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 62.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 61.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 61.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 61.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 61.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 61.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 61.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 61.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 60.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 60.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 60.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 60.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 59.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 59.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 59.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 59.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 59.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 59.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 59.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 59.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 59.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 59.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 59.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 59.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 58.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 58.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 58.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 58.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 58.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 58.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 58.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 57.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 57.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 56.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 56.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 55.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 55.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 55.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 55.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 54.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 54.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 54.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 53.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 53.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 52.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 52.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 52.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 51.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 51.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 51.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 50.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 50.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 49.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 48.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 45.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 45.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 45.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 70.3
Samples: 246

Max nTPM: 123.7
Min nTPM: 31.8
Std nTPM: 15.3
Median nTPM: 69.0
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 123.7
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 118.3
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 108.9
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 108.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 108.5
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 105.4
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 100.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 100.2
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 99.7
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 99.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 97.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 96.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 96.2
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 96.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 95.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 95.6
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 95.5
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 94.8
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 94.0
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 93.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 93.0
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 92.9
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 92.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 91.4
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 91.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 91.3
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 90.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 90.1
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 89.9
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 89.9
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 88.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 88.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 88.3
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 86.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 86.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 86.1
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 86.1
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 85.5
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 84.9
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 84.7
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 84.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 84.0
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 83.6
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 83.4
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 83.3
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 82.9
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 82.6
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 82.0
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 81.7
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 81.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 81.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 81.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 81.2
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 81.1
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 80.6
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 80.6
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 80.5
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 80.3
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 79.9
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 79.9
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 79.8
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 79.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 79.6
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 79.5
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 79.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 79.2
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 79.0
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 78.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 78.6
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 78.3
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 78.2
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 77.8
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 77.6
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 77.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 77.2
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 76.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 76.5
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 76.0
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 76.0
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 75.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 75.9
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 75.8
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 75.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 75.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 75.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 75.5
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 75.3
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 75.2
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 75.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 75.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 74.9
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 74.8
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 74.8
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 74.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 74.5
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 74.3
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 74.2
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 74.1
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 73.8
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 73.6
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 73.2
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 73.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 73.0
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 72.7
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 72.5
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 72.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 72.2
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 72.1
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 72.1
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 71.7
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 71.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 71.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 70.9
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 70.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 70.5
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 70.0
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 69.8
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 69.7
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 69.6
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 69.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 69.4
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 69.4
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 69.2
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 68.8
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 68.3
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 68.2
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 68.1
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 68.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 68.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 68.0
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 68.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 67.9
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 67.6
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 67.6
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 67.4
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 67.3
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 67.2
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 67.2
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 67.1
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 67.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 67.1
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 66.4
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 66.2
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 66.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 66.0
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 65.7
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 65.6
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 65.6
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 65.4
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 65.3
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 64.7
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 64.5
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 64.4
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 64.4
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 64.4
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 64.3
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 64.1
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 64.0
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 64.0
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 63.8
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 63.5
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 63.4
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 63.1
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 63.1
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 63.0
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 63.0
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 62.8
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 62.6
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 62.6
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 62.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 62.3
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 62.1
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 61.6
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 61.5
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 61.1
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 60.9
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 60.7
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 60.7
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 60.6
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 60.6
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 60.5
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 60.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 59.6
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 59.0
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 58.8
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 58.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 58.5
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 57.8
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 57.8
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 57.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 57.7
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 57.5
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 57.4
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 57.3
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 57.0
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 56.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 56.7
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 56.7
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 56.6
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 56.6
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 56.6
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 56.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 56.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 55.9
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 55.8
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 55.6
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 55.1
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 55.0
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 54.9
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 54.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 54.5
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 54.3
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 53.9
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 53.9
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 53.4
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 52.9
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 52.8
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 52.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 52.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 52.1
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 52.0
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 51.8
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 51.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 51.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 51.6
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 51.2
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 51.1
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 50.9
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 50.6
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 50.3
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 49.9
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 49.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 48.8
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 47.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 47.4
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 46.9
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 45.2
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 44.8
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 42.9
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 42.0
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 41.4
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 39.5
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 38.1
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 38.1
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 37.2
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 31.8
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Brain - Putamen (basal ganglia)
Average nTPM: 71.9
Samples: 205

Max nTPM: 114.3
Min nTPM: 44.6
Std nTPM: 13.2
Median nTPM: 69.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 114.3
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 112.0
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 111.8
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 105.7
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 102.5
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 101.9
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 101.5
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 101.0
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 99.7
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 98.1
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 96.3
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 95.7
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 94.9
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 94.5
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 93.9
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 93.6
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 93.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 92.7
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 91.3
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 90.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 90.7
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 90.5
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 90.1
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 88.5
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 86.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 86.4
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 85.3
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 85.3
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 85.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 85.0
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 85.0
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 84.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 84.5
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 84.5
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 84.4
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 84.3
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 84.2
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 83.4
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 83.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 82.5
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 81.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 81.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 81.2
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 80.6
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 80.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 80.2
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 80.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 80.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 79.9
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 79.8
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 79.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 79.7
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 79.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 79.2
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 79.1
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 78.9
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 78.9
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 78.7
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 77.8
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 77.8
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 77.6
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 77.1
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 76.6
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 76.6
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 76.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 76.5
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 76.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 76.2
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 75.1
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 75.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 75.0
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 74.4
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 74.4
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 74.2
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 74.2
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 74.1
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 73.8
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 73.6
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 73.5
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 73.5
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 73.4
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 73.3
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 73.3
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 73.2
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 73.2
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 72.7
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 72.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 72.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 72.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 72.1
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 72.1
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 72.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 71.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 71.9
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 71.7
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 71.7
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 71.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 71.3
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 71.3
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 71.3
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 70.5
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 70.5
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 69.6
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 69.6
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 69.6
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 69.6
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 69.5
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 69.4
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 69.3
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 69.1
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 69.0
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 68.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 68.9
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 68.8
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 68.5
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 68.4
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 68.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 68.3
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 68.3
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 68.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 68.2
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 68.1
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 67.2
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 67.1
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 67.0
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 66.7
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 66.7
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 66.7
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 66.7
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 66.5
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 66.3
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 66.3
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 66.0
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 65.4
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 65.4
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 65.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 65.2
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 65.1
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 65.1
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 65.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 65.1
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 65.0
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 64.7
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 64.5
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 64.4
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 64.0
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 63.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 63.7
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 63.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 63.1
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 63.1
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 63.0
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 62.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 62.6
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 62.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 62.4
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 62.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 62.1
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 61.8
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 61.8
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 61.8
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 61.7
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 61.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 61.4
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 61.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 61.0
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 60.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 60.5
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 60.5
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 60.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 60.1
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 60.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 59.5
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 59.3
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 59.0
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 59.0
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 58.8
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 58.6
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 58.5
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 58.5
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 58.2
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 58.2
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 57.5
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 57.4
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 57.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 57.1
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 57.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 56.9
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 56.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 56.4
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 56.2
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 55.7
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 52.9
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 52.6
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 49.7
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 49.5
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 49.5
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 49.3
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 49.3
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 49.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 49.0
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 48.6
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 47.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 46.3
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 44.6
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

177.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 130.9
FF:10164-103B2 76 years, female 130.9
Nucleus accumbens
Scaled Tags Per Million: 145.6
FF:10037-101F1 23-56 years, mixed 145.6
Putamen
Scaled Tags Per Million: 137.9
FF:10176-103C5 60 years, female 137.9
Globus pallidus
Scaled Tags Per Million: 177.2
FF:10175-103C4 60 years, female 204.0
FF:10161-103A8 76 years, female 150.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

65.1
Pig sample Sample description nTPM
Caudate
nTPM: 47.9
Samples: 4

Max nTPM: 56.6
Min nTPM: 39.7
Sample A Female 39.7
Sample B Female 48.8
Sample C Male 56.6
Sample D Male 46.4
Putamen
nTPM: 58.5
Samples: 4

Max nTPM: 73.9
Min nTPM: 46.8
Sample A Female 56.1
Sample B Female 46.8
Sample C Male 73.9
Sample D Male 57.1
Septum
nTPM: 65.1
Samples: 4

Max nTPM: 99.8
Min nTPM: 50.5
Sample A Female 50.5
Sample B Female 50.6
Sample C Male 99.8
Sample D Male 59.3
Ventral pallidum
nTPM: 58.9
Samples: 4

Max nTPM: 88.8
Min nTPM: 41.0
Sample A Female 41.0
Sample B Female 57.5
Sample C Male 88.8
Sample D Male 48.4

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

62.6
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 49.8
Samples: 4

Max nTPM: 51.4
Min nTPM: 48.7
Sample A Male 51.4
Sample B Male 48.7
Sample C Female 48.7
Sample D Female 50.2
Septum
nTPM: 60.0
Samples: 4

Max nTPM: 63.5
Min nTPM: 56.1
Sample A Male 63.5
Sample B Male 59.3
Sample C Female 61.0
Sample D Female 56.1
Ventral forebrain
nTPM: 62.6
Samples: 4

Max nTPM: 66.6
Min nTPM: 57.9
Sample A Male 57.9
Sample B Male 66.6
Sample C Female 64.6
Sample D Female 61.1

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 3.6
74641317 Antisense, RP_060220_02_E05, Mouse strain C57BL/6J (56 days, male) 8.1
68638101 Antisense, RP_050126_02_C02, Mouse strain C57BL/6J (56 days, male) 2.6
71496988 Antisense, RP_050913_04_H04, Mouse strain C57BL/6J (56 days, male) 0.1
Pallidum
Expression energy: 4.8
74641317 Antisense, RP_060220_02_E05, Mouse strain C57BL/6J (56 days, male) 10.3
68638101 Antisense, RP_050126_02_C02, Mouse strain C57BL/6J (56 days, male) 3.9
71496988 Antisense, RP_050913_04_H04, Mouse strain C57BL/6J (56 days, male) 0.1

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