HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:60.9 nTPM
HPA Brain:94.5 nTPM
GTEx:60.9 nTPM
FANTOM5:156.6 Scaled Tags Per Million
Pig:68.7 nTPM
Mouse:54.1 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040870Antibody CAB034261
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 94.5
Sample id Sample description nTPM
Hippocampus
nTPM: 78.8
1898 Male, age 80, left hemisphere 107.7
2621 Female, age 67, right hemisphere 84.5
1855 Male, age 76, left hemisphere 83.2
2148 Female, age 91, left hemisphere 69.4
2529 Female, age 94, left hemisphere 66.9
1911 Female, age 85, right hemisphere 61.3
Dentate gyrus
nTPM: 75.2
1927 Female, age 91, both hemispheres 89.8
2010 Male, age 76, both hemispheres 86.6
2530 Female, age 94, left hemisphere 82.5
2528 Male, age 74, both hemispheres 71.3
2246 Female, age 85, both hemispheres 66.3
2531 Female, age 67, both hemispheres 54.6
Entorhinal gyrus
nTPM: 76.3
2764 Male, age 80, right hemisphere 94.0
1938 Female, age 85, left hemisphere 82.6
1787 Male, age 76, left hemisphere 78.2
2117 Female, age 91, right hemisphere 75.6
2613 Female, age 94, left hemisphere 72.8
2686 Male, age 75, right hemisphere 54.6
Hippocampus, CA1
nTPM: 79.6
2749 Male, age 80, left hemisphere 120.5
1873 Female, age 85, both hemispheres 87.5
2527 Male, age 74, both hemispheres 72.6
2045 Male, age 76, both hemispheres 64.1
2082 Female, age 91, right hemisphere 53.5
Hippocampus, CA2
nTPM: 84.7
1892 Male, age 76, both hemispheres 118.0
1963 Male, age 80, left hemisphere 110.2
1940 Female, age 85, left hemisphere 80.7
2249 Male, age 74, both hemispheres 80.2
2437 Female, age 94, left hemisphere 62.0
2113 Female, age 91, right hemisphere 57.2
Hippocampus, CA3
nTPM: 74.0
1867 Male, age 76, both hemispheres 86.1
2436 Male, age 74, both hemispheres 84.6
2137 Male, age 80, left hemisphere 81.5
1891 Female, age 85, both hemispheres 74.7
2620 Female, age 94, left hemisphere 69.4
2861 Female, age 67, both hemispheres 47.4
Parahippocampal cortex
nTPM: 74.2
1850 Male, age 80, both hemispheres 105.1
2532 Female, age 72, left hemisphere 86.0
1933 Female, age 85, both hemispheres 80.5
1990 Female, age 91, right hemisphere 79.2
2245 Female, age 91, both hemispheres 77.1
2250 Female, age 67, right hemisphere 70.6
2018 Male, age 76, both hemispheres 64.5
2692 Male, age 74, both hemispheres 60.3
2693 Female, age 94, both hemispheres 59.5
2622 Female, age 67, right hemisphere 59.0
Perirhinal gyrus
nTPM: 94.5
1794 Male, age 80, right hemisphere 110.6
1847 Female, age 91, left hemisphere 108.2
1841 Female, age 85, right hemisphere 94.5
2521 Female, age 94, right hemisphere 79.6
2848 Male, age 76, right hemisphere 79.6
Subiculum
nTPM: 68.3
1901 Male, age 80, both hemispheres 85.5
1977 Female, age 85, both hemispheres 81.8
2619 Male, age 74, both hemispheres 72.3
2042 Male, age 76, both hemispheres 59.6
2729 Female, age 91, right hemisphere 56.5
2438 Female, age 94, left hemisphere 54.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 60.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 60.9
Samples: 197

Max nTPM: 97.1
Min nTPM: 36.9
Std nTPM: 12.0
Median nTPM: 58.3
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 97.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 97.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 96.5
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 92.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 90.2
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 89.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 87.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 87.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 87.0
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 86.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 85.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 156.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 156.6
FF:10169-103B7 60 years, female 189.0
FF:10153-102I9 76 years, female 124.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 68.7
Pig sample Sample description nTPM
Subiculum
nTPM: 62.7
Samples: 4

Max nTPM: 73.7
Min nTPM: 54.8
Sample A Female 73.7
Sample B Female 59.7
Sample C Male 62.6
Sample D Male 54.8
Dorsal hippocampus
nTPM: 68.0
Samples: 4

Max nTPM: 77.8
Min nTPM: 48.4
Sample A Female 77.8
Sample B Female 74.2
Sample C Male 71.7
Sample D Male 48.4
Entorhinal cortex
nTPM: 66.8
Samples: 4

Max nTPM: 77.7
Min nTPM: 59.7
Sample A Female 68.1
Sample B Female 77.7
Sample C Male 61.6
Sample D Male 59.7
Ventral hippocampus
nTPM: 68.8
Samples: 4

Max nTPM: 86.0
Min nTPM: 47.1
Sample A Female 72.2
Sample B Female 47.1
Sample C Male 86.0
Sample D Male 69.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 54.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 54.1
Samples: 4

Max nTPM: 60.8
Min nTPM: 49.4
Sample A Male 52.3
Sample B Male 53.9
Sample C Female 49.4
Sample D Female 60.8
Hippocampal formation
nTPM: 50.1
Samples: 4

Max nTPM: 54.6
Min nTPM: 46.0
Sample A Male 46.0
Sample B Male 51.4
Sample C Female 54.6
Sample D Female 48.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
74641317 Antisense, RP_060220_02_E05, Mouse strain C57BL/6J (56 days, male) 12.7
68638101 Antisense, RP_050126_02_C02, Mouse strain C57BL/6J (56 days, male) 4.4
71496988 Antisense, RP_050913_04_H04, Mouse strain C57BL/6J (56 days, male) 0.4

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