HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:331.7 nTPM
HPA Brain:286.3 nTPM
GTEx:331.7 nTPM
FANTOM5:383.8 Scaled Tags Per Million
Pig:349.7 nTPM
Mouse:308.6 nTPM
Allen mouse:5.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001527Antibody HPA005692Antibody CAB009538
Glial cells LowNot detectedNot detected
Neuronal cells LowNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 286.3
Sample id Sample description nTPM
Hippocampus
nTPM: 205.3
1911 Female, age 85, right hemisphere 311.0
1898 Male, age 80, left hemisphere 225.8
2621 Female, age 67, right hemisphere 193.1
2529 Female, age 94, left hemisphere 190.1
2148 Female, age 91, left hemisphere 164.0
1855 Male, age 76, left hemisphere 147.8
Dentate gyrus
nTPM: 245.0
2530 Female, age 94, left hemisphere 476.8
2528 Male, age 74, both hemispheres 309.1
2010 Male, age 76, both hemispheres 234.2
2246 Female, age 85, both hemispheres 185.0
2531 Female, age 67, both hemispheres 147.3
1927 Female, age 91, both hemispheres 117.4
Entorhinal gyrus
nTPM: 200.6
2117 Female, age 91, right hemisphere 335.4
2764 Male, age 80, right hemisphere 262.4
1938 Female, age 85, left hemisphere 190.7
1787 Male, age 76, left hemisphere 142.8
2613 Female, age 94, left hemisphere 139.3
2686 Male, age 75, right hemisphere 133.2
Hippocampus, CA1
nTPM: 176.5
1873 Female, age 85, both hemispheres 241.9
2527 Male, age 74, both hemispheres 230.7
2082 Female, age 91, right hemisphere 194.3
2749 Male, age 80, left hemisphere 171.2
2045 Male, age 76, both hemispheres 44.1
Hippocampus, CA2
nTPM: 261.5
2249 Male, age 74, both hemispheres 429.6
1963 Male, age 80, left hemisphere 359.6
1940 Female, age 85, left hemisphere 235.2
2437 Female, age 94, left hemisphere 222.5
2113 Female, age 91, right hemisphere 199.1
1892 Male, age 76, both hemispheres 123.2
Hippocampus, CA3
nTPM: 150.9
1891 Female, age 85, both hemispheres 354.8
1867 Male, age 76, both hemispheres 185.9
2436 Male, age 74, both hemispheres 180.8
2137 Male, age 80, left hemisphere 84.6
2620 Female, age 94, left hemisphere 60.6
2861 Female, age 67, both hemispheres 38.3
Parahippocampal cortex
nTPM: 143.6
2532 Female, age 72, left hemisphere 220.9
1990 Female, age 91, right hemisphere 200.9
2692 Male, age 74, both hemispheres 176.5
1850 Male, age 80, both hemispheres 159.1
2018 Male, age 76, both hemispheres 148.3
1933 Female, age 85, both hemispheres 147.5
2245 Female, age 91, both hemispheres 124.3
2250 Female, age 67, right hemisphere 123.0
2693 Female, age 94, both hemispheres 102.1
2622 Female, age 67, right hemisphere 33.3
Perirhinal gyrus
nTPM: 88.7
2521 Female, age 94, right hemisphere 108.7
2848 Male, age 76, right hemisphere 96.9
1847 Female, age 91, left hemisphere 88.1
1794 Male, age 80, right hemisphere 84.8
1841 Female, age 85, right hemisphere 65.2
Subiculum
nTPM: 286.3
2042 Male, age 76, both hemispheres 451.3
1901 Male, age 80, both hemispheres 371.5
1977 Female, age 85, both hemispheres 319.8
2729 Female, age 91, right hemisphere 199.6
2438 Female, age 94, left hemisphere 190.1
2619 Male, age 74, both hemispheres 185.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 331.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 331.7
Samples: 197

Max nTPM: 1316.9
Min nTPM: 17.0
Std nTPM: 242.1
Median nTPM: 268.0
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 1316.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 1079.3
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 1049.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 1039.1
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 1022.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 988.4
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 923.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 883.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 868.7
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 857.7
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 842.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 383.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 383.8
FF:10153-102I9 76 years, female 418.6
FF:10169-103B7 60 years, female 348.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 349.7
Pig sample Sample description nTPM
Subiculum
nTPM: 95.2
Samples: 4

Max nTPM: 128.3
Min nTPM: 65.6
Sample A Female 102.1
Sample B Female 128.3
Sample C Male 65.6
Sample D Male 84.9
Dorsal hippocampus
nTPM: 349.7
Samples: 4

Max nTPM: 563.5
Min nTPM: 79.9
Sample A Female 563.5
Sample B Female 239.2
Sample C Male 516.0
Sample D Male 79.9
Entorhinal cortex
nTPM: 80.3
Samples: 4

Max nTPM: 142.7
Min nTPM: 45.6
Sample A Female 60.3
Sample B Female 142.7
Sample C Male 45.6
Sample D Male 72.4
Ventral hippocampus
nTPM: 192.5
Samples: 4

Max nTPM: 282.0
Min nTPM: 79.0
Sample A Female 245.6
Sample B Female 79.0
Sample C Male 163.5
Sample D Male 282.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 308.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 154.6
Samples: 4

Max nTPM: 218.0
Min nTPM: 89.0
Sample A Male 218.0
Sample B Male 142.9
Sample C Female 168.4
Sample D Female 89.0
Hippocampal formation
nTPM: 308.6
Samples: 4

Max nTPM: 445.0
Min nTPM: 217.6
Sample A Male 217.6
Sample B Male 253.2
Sample C Female 445.0
Sample D Female 318.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.3
68795444 Antisense, RP_041130_01_F08, Mouse strain C57BL/6J (56 days, male) 5.3

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