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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1082.3
nTPM
FANTOM5:
1673.6
Scaled Tags Per Million
Pig:
622.7
nTPM
Allen mouse:
2.4
Expression energy
PONS - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1082.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 1000.4
2188
Female, age 91, both hemispheres
1246.9
2090
Male, age 80, both hemispheres
1176.6
2301
Female, age 85, both hemispheres
1015.4
1984
Male, age 76, both hemispheres
562.7
Dorsal cochlear nucleus nTPM: 794.8
2187
Female, age 91, both hemispheres
1103.3
2378
Male, age 80, both hemispheres
891.9
2802
Male, age 74, right hemisphere
699.5
2058
Male, age 76, both hemispheres
664.5
2370
Male, age 61, both hemispheres
615.0
Dorsal tegmental nucleus nTPM: 695.9
2083
Male, age 80, both hemispheres
1075.8
2326
Male, age 74, both hemispheres
845.8
1936
Male, age 76, left hemisphere
559.6
2358
Male, age 61, both hemispheres
302.6
Dorsolateral tegmental area nTPM: 830.2
2751
Female, age 85, both hemispheres
1376.0
2654
Male, age 80, both hemispheres
991.0
2337
Male, age 61, both hemispheres
879.4
2360
Male, age 74, both hemispheres
575.4
2141
Male, age 76, both hemispheres
329.2
Kolliker-Fuse nucleus nTPM: 749.9
2793
Female, age 91, left hemisphere
995.6
2163
Male, age 80, both hemispheres
738.5
2315
Male, age 76, right hemisphere
515.6
Lateral lemniscal nuclei nTPM: 769.5
2320
Female, age 91, left hemisphere
1012.1
2036
Male, age 80, both hemispheres
841.0
2453
Male, age 74, right hemisphere
764.3
2169
Male, age 76, both hemispheres
627.4
2746
Female, age 85, left hemisphere
602.8
Lateral parabrachial nucleus nTPM: 877.3
2792
Male, age 76, both hemispheres
1135.0
2790
Male, age 61, both hemispheres
929.2
2013
Male, age 80, both hemispheres
876.5
2139
Female, age 85, right hemisphere
568.6
Lateral vestibular nucleus nTPM: 833.6
2311
Male, age 80, both hemispheres
1027.8
2184
Male, age 76, both hemispheres
639.3
Locus coeruleus nTPM: 372.4
2162
Male, age 80, both hemispheres
494.0
2317
Female, age 72, unknown
472.1
2123
Female, age 91, both hemispheres
411.2
2014
Male, age 55, unknown
353.8
2720
Male, age 74, both hemispheres
337.7
2788
Male, age 74, unknown
307.0
1980
Male, age 76, both hemispheres
231.0
Medial parabrachial nucleus nTPM: 901.7
2463
Female, age 85, right hemisphere
1214.6
2170
Female, age 91, both hemispheres
1196.8
2854
Male, age 80, both hemispheres
756.7
2156
Male, age 61, both hemispheres
684.7
2786
Male, age 76, both hemispheres
655.6
Medial periolivary nuclei nTPM: 815.6
2791
Male, age 74, right hemisphere
1045.0
2081
Male, age 80, both hemispheres
942.5
2458
Female, age 91, both hemispheres
920.9
2063
Male, age 76, both hemispheres
701.5
2171
Female, age 85, both hemispheres
467.8
Motor facial nucleus nTPM: 854.9
2126
Male, age 61, both hemispheres
1399.2
2365
Male, age 74, right hemisphere
1084.9
2795
Female, age 91, both hemispheres
748.2
2327
Male, age 80, both hemispheres
653.9
2697
Female, age 85, both hemispheres
649.4
2062
Male, age 76, both hemispheres
593.7
Motor trigeminal nucleus nTPM: 759.1
2321
Female, age 91, both hemispheres
944.5
2560
Male, age 74, both hemispheres
939.6
2079
Male, age 80, both hemispheres
690.3
2309
Male, age 76, both hemispheres
661.3
2335
Male, age 61, both hemispheres
560.0
Nuclei of the trapezoid body nTPM: 796.8
2368
Female, age 91, both hemispheres
1041.3
2159
Male, age 61, both hemispheres
892.5
2166
Male, age 80, both hemispheres
888.7
1983
Male, age 76, both hemispheres
675.4
2735
Female, age 85, both hemispheres
485.8
Nucleus raphe magnus nTPM: 668.3
2459
Female, age 91, both hemispheres
973.3
2328
Male, age 80, both hemispheres
784.7
2455
Male, age 74, both hemispheres
758.5
2051
Male, age 76, both hemispheres
635.3
2160
Male, age 61, both hemispheres
492.6
2172
Female, age 85, both hemispheres
365.6
Paramedian reticular nucleus nTPM: 915.9
2057
Male, age 80, both hemispheres
1185.9
2052
Male, age 76, both hemispheres
922.6
2050
Female, age 85, both hemispheres
864.6
2313
Male, age 61, both hemispheres
690.6
Pedunculopontine tegmental nucleus nTPM: 724.5
2338
Male, age 61, both hemispheres
794.1
2334
Male, age 80, both hemispheres
754.9
1921
Female, age 85, both hemispheres
624.6
Pontine nuclei nTPM: 907.9
2454
Male, age 74, left hemisphere
1390.5
2109
Female, age 72, unknown
1177.9
2319
Female, age 91, both hemispheres
966.0
2727
Male, age 61, right hemisphere
896.4
1863
Male, age 55, unknown
834.0
2115
Male, age 80, left hemisphere
725.7
1968
Male, age 76, left hemisphere
712.2
2787
Female, age 85, both hemispheres
561.0
Pontine raphe nucleus nTPM: 566.0
2122
Female, age 85, midline
612.1
2853
Male, age 76, midline
519.8
Posteroventral cochlear nucleus nTPM: 1030.8
2341
Male, age 80, both hemispheres
1528.0
2135
Female, age 91, both hemispheres
1282.9
2070
Male, age 76, both hemispheres
901.6
2371
Male, age 61, both hemispheres
760.9
2752
Female, age 85, both hemispheres
680.4
Principal sensory trigeminal nucleus nTPM: 729.8
2367
Female, age 91, left hemisphere
1000.6
2008
Male, age 80, left hemisphere
778.4
2158
Male, age 61, both hemispheres
579.7
2324
Male, age 76, both hemispheres
560.4
Reticular pontine nucleus, caudal nTPM: 997.0
2457
Female, age 91, both hemispheres
1308.5
2559
Male, age 74, both hemispheres
1103.3
2092
Male, age 76, both hemispheres
918.3
2332
Male, age 80, right hemisphere
658.0
Reticular pontine nucleus, oral nTPM: 1082.3
2361
Male, age 74, both hemispheres
1654.2
2366
Female, age 91, both hemispheres
1072.2
1939
Male, age 80, both hemispheres
1032.3
2012
Female, age 85, both hemispheres
933.7
2167
Male, age 76, both hemispheres
718.9
Reticulotegmental nucleus nTPM: 689.8
2322
Female, age 91, both hemispheres
893.0
2333
Male, age 80, both hemispheres
810.2
2452
Male, age 74, both hemispheres
681.8
2325
Male, age 76, both hemispheres
374.1
Spinal trigeminal nucleus, oral nTPM: 691.0
2164
Male, age 80, both hemispheres
840.0
1978
Male, age 76, both hemispheres
626.5
2737
Female, age 85, both hemispheres
606.3
Subcoeruleus area nTPM: 780.6
2369
Female, age 85, left hemisphere
1529.0
1958
Male, age 80, both hemispheres
766.2
2089
Male, age 76, left hemisphere
667.8
2451
Male, age 74, both hemispheres
472.6
2323
Female, age 91, left hemisphere
467.6
Superior olive nTPM: 917.6
2364
Male, age 74, right hemisphere
1211.4
2020
Male, age 76, both hemispheres
1032.4
2329
Male, age 80, right hemisphere
840.5
1875
Female, age 85, both hemispheres
775.7
2561
Female, age 91, both hemispheres
728.3
Ventral periolivary nuclei nTPM: 744.6
2023
Male, age 76, both hemispheres
1151.0
2165
Male, age 80, both hemispheres
779.6
2794
Female, age 91, left hemisphere
608.1
2130
Female, age 85, both hemispheres
439.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 823.3
2456
Female, age 91, both hemispheres
1155.7
2449
Male, age 74, both hemispheres
818.1
1959
Male, age 76, both hemispheres
803.7
2359
Male, age 61, both hemispheres
751.6
2161
Male, age 80, both hemispheres
710.0
2840
Female, age 85, both hemispheres
700.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
622.7
Pig sample
Sample description
nTPM
Pons nTPM: 622.7
Samples: 4
Max nTPM: 922.1
Min nTPM: 461.3
Sample A
Female
461.3
Sample B
Female
493.9
Sample C
Male
613.4
Sample D
Male
922.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.
The Human Protein Atlas project is funded
