PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:1579.6 nTPM
FANTOM5:1673.6 Scaled Tags Per Million
Pig:1234.8 nTPM
Mouse:1013.7 nTPM
Allen mouse:3.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 1579.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 1000.4
2188 Female, age 91, both hemispheres 1246.9
2090 Male, age 80, both hemispheres 1176.6
2301 Female, age 85, both hemispheres 1015.4
1984 Male, age 76, both hemispheres 562.7
Area postrema
nTPM: 676.9
2306 Male, age 80, both hemispheres 864.7
2799 Male, age 61, both hemispheres 702.4
2054 Male, age 76, both hemispheres 463.5
Dorsal cochlear nucleus
nTPM: 794.8
2187 Female, age 91, both hemispheres 1103.3
2378 Male, age 80, both hemispheres 891.9
2802 Male, age 74, right hemisphere 699.5
2058 Male, age 76, both hemispheres 664.5
2370 Male, age 61, both hemispheres 615.0
Dorsal medullary reticular nucleus
nTPM: 927.4
2040 Female, age 85, both hemispheres 1009.7
2373 Male, age 61, both hemispheres 954.1
2088 Male, age 76, both hemispheres 818.4
Dorsal motor vagal complex
nTPM: 464.6
2185 Male, age 76, both hemispheres 756.3
2000 Male, age 74, unknown 585.7
2133 Female, age 91, both hemispheres 577.1
2807 Female, age 85, both hemispheres 493.0
2797 Male, age 61, both hemispheres 371.0
2643 Male, age 74, both hemispheres 336.2
2844 Male, age 55, unknown 329.3
2813 Female, age 72, unknown 267.9
Dorsal tegmental nucleus
nTPM: 695.9
2083 Male, age 80, both hemispheres 1075.8
2326 Male, age 74, both hemispheres 845.8
1936 Male, age 76, left hemisphere 559.6
2358 Male, age 61, both hemispheres 302.6
Dorsolateral tegmental area
nTPM: 830.2
2751 Female, age 85, both hemispheres 1376.0
2654 Male, age 80, both hemispheres 991.0
2337 Male, age 61, both hemispheres 879.4
2360 Male, age 74, both hemispheres 575.4
2141 Male, age 76, both hemispheres 329.2
Gigantocellular reticular nuclei, medullary
nTPM: 1030.4
2314 Male, age 61, both hemispheres 1783.8
2387 Female, age 91, both hemispheres 1275.8
1876 Female, age 85, both hemispheres 1182.3
2310 Male, age 80, both hemispheres 819.6
2022 Male, age 76, right hemisphere 575.2
2462 Male, age 74, both hemispheres 545.6
Gigantocellular reticular nuclei, pars
nTPM: 760.4
2336 Male, age 61, both hemispheres 872.1
2706 Male, age 80, both hemispheres 799.0
2330 Male, age 80, both hemispheres 776.4
2084 Female, age 85, both hemispheres 760.6
2168 Male, age 76, both hemispheres 593.8
Inferior olive
nTPM: 1067.9
2178 Male, age 61, both hemispheres 1474.3
2085 Female, age 85, both hemispheres 1086.1
2563 Male, age 74, both hemispheres 1052.3
2379 Male, age 80, both hemispheres 999.5
2628 Female, age 91, both hemispheres 727.1
Kolliker-Fuse nucleus
nTPM: 749.9
2793 Female, age 91, left hemisphere 995.6
2163 Male, age 80, both hemispheres 738.5
2315 Male, age 76, right hemisphere 515.6
Lateral lemniscal nuclei
nTPM: 769.5
2320 Female, age 91, left hemisphere 1012.1
2036 Male, age 80, both hemispheres 841.0
2453 Male, age 74, right hemisphere 764.3
2169 Male, age 76, both hemispheres 627.4
2746 Female, age 85, left hemisphere 602.8
Lateral medullary reticular nucleus
nTPM: 1047.7
2305 Male, age 74, both hemispheres 1284.9
2852 Male, age 80, both hemispheres 1280.5
2190 Female, age 85, both hemispheres 1134.4
2374 Male, age 61, both hemispheres 989.1
2804 Female, age 91, both hemispheres 823.9
2044 Male, age 76, both hemispheres 773.5
Lateral parabrachial nucleus
nTPM: 877.3
2792 Male, age 76, both hemispheres 1135.0
2790 Male, age 61, both hemispheres 929.2
2013 Male, age 80, both hemispheres 876.5
2139 Female, age 85, right hemisphere 568.6
Lateral vestibular nucleus
nTPM: 833.6
2311 Male, age 80, both hemispheres 1027.8
2184 Male, age 76, both hemispheres 639.3
Locus coeruleus
nTPM: 372.4
2162 Male, age 80, both hemispheres 494.0
2317 Female, age 72, unknown 472.1
2123 Female, age 91, both hemispheres 411.2
2014 Male, age 55, unknown 353.8
2720 Male, age 74, both hemispheres 337.7
2788 Male, age 74, unknown 307.0
1980 Male, age 76, both hemispheres 231.0
Medial olivary nucleus
nTPM: 1233.4
1943 Male, age 61, both hemispheres 1818.3
1962 Male, age 76, both hemispheres 1300.9
2138 Female, age 91, both hemispheres 1042.5
2851 Male, age 80, both hemispheres 771.8
Medial parabrachial nucleus
nTPM: 901.7
2463 Female, age 85, right hemisphere 1214.6
2170 Female, age 91, both hemispheres 1196.8
2854 Male, age 80, both hemispheres 756.7
2156 Male, age 61, both hemispheres 684.7
2786 Male, age 76, both hemispheres 655.6
Medial periolivary nuclei
nTPM: 815.6
2791 Male, age 74, right hemisphere 1045.0
2081 Male, age 80, both hemispheres 942.5
2458 Female, age 91, both hemispheres 920.9
2063 Male, age 76, both hemispheres 701.5
2171 Female, age 85, both hemispheres 467.8
Medial vestibular nucleus
nTPM: 839.9
2093 Male, age 80, both hemispheres 1123.9
2801 Male, age 74, both hemispheres 1100.8
2803 Female, age 91, both hemispheres 969.3
2743 Female, age 85, both hemispheres 761.4
2624 Male, age 61, both hemispheres 709.6
2134 Male, age 76, both hemispheres 374.6
Motor facial nucleus
nTPM: 854.9
2126 Male, age 61, both hemispheres 1399.2
2365 Male, age 74, right hemisphere 1084.9
2795 Female, age 91, both hemispheres 748.2
2327 Male, age 80, both hemispheres 653.9
2697 Female, age 85, both hemispheres 649.4
2062 Male, age 76, both hemispheres 593.7
Motor hypoglossal nucleus
nTPM: 741.3
2125 Female, age 91, both hemispheres 1178.5
2132 Female, age 85, both hemispheres 1105.5
2182 Male, age 80, both hemispheres 895.3
2277 Male, age 76, both hemispheres 271.5
2461 Male, age 61, both hemispheres 255.8
Motor trigeminal nucleus
nTPM: 759.1
2321 Female, age 91, both hemispheres 944.5
2560 Male, age 74, both hemispheres 939.6
2079 Male, age 80, both hemispheres 690.3
2309 Male, age 76, both hemispheres 661.3
2335 Male, age 61, both hemispheres 560.0
Nuclei of the trapezoid body
nTPM: 796.8
2368 Female, age 91, both hemispheres 1041.3
2159 Male, age 61, both hemispheres 892.5
2166 Male, age 80, both hemispheres 888.7
1983 Male, age 76, both hemispheres 675.4
2735 Female, age 85, both hemispheres 485.8
Nucleus ambiguus
nTPM: 1101.1
2071 Male, age 76, both hemispheres 1349.1
2096 Female, age 85, both hemispheres 853.0
Nucleus cuneatus
nTPM: 965.0
2380 Male, age 80, both hemispheres 1356.9
2376 Male, age 61, both hemispheres 1346.5
2808 Female, age 85, both hemispheres 1218.9
2381 Male, age 80, both hemispheres 1214.0
2100 Male, age 76, both hemispheres 929.8
2564 Male, age 74, both hemispheres 832.5
2131 Male, age 76, both hemispheres 703.6
2562 Male, age 61, both hemispheres 546.5
2805 Female, age 91, both hemispheres 535.9
Nucleus gracilis
nTPM: 981.3
2382 Male, age 80, both hemispheres 1319.7
2299 Female, age 85, both hemispheres 827.2
2627 Male, age 74, both hemispheres 797.1
Nucleus raphe magnus
nTPM: 668.3
2459 Female, age 91, both hemispheres 973.3
2328 Male, age 80, both hemispheres 784.7
2455 Male, age 74, both hemispheres 758.5
2051 Male, age 76, both hemispheres 635.3
2160 Male, age 61, both hemispheres 492.6
2172 Female, age 85, both hemispheres 365.6
Nucleus raphe obscurus
nTPM: 1579.6
2845 Female, age 85, midline 1749.4
2800 Male, age 61, midline 1691.8
2142 Male, age 76, midline 1297.7
Nucleus raphe pallidus
nTPM: 1459.3
1924 Male, age 61, midline 2051.9
2145 Male, age 76, midline 1306.9
2183 Male, age 80, midline 1019.1
Nucleus tractus solitarii
nTPM: 347.0
2144 Female, age 91, right hemisphere 368.9
2191 Female, age 85, both hemispheres 343.7
2656 Male, age 76, both hemispheres 339.9
2307 Male, age 80, both hemispheres 335.3
Paramedian reticular nucleus
nTPM: 915.9
2057 Male, age 80, both hemispheres 1185.9
2052 Male, age 76, both hemispheres 922.6
2050 Female, age 85, both hemispheres 864.6
2313 Male, age 61, both hemispheres 690.6
Parvicellular reticular nuclei
nTPM: 831.0
2119 Male, age 80, both hemispheres 1032.2
2095 Male, age 76, both hemispheres 886.9
2558 Male, age 74, both hemispheres 574.0
Parvicellular reticular nuclei, medullary
nTPM: 718.7
2189 Female, age 91, both hemispheres 790.1
2091 Female, age 85, both hemispheres 753.6
2181 Male, age 80, left hemisphere 612.3
Pedunculopontine tegmental nucleus
nTPM: 724.5
2338 Male, age 61, both hemispheres 794.1
2334 Male, age 80, both hemispheres 754.9
1921 Female, age 85, both hemispheres 624.6
Peritrigeminal nucleus
nTPM: 1018.0
2067 Female, age 85, both hemispheres 1113.3
2179 Male, age 61, both hemispheres 1052.0
2136 Male, age 76, both hemispheres 888.8
Pontine nuclei
nTPM: 907.9
2454 Male, age 74, left hemisphere 1390.5
2109 Female, age 72, unknown 1177.9
2319 Female, age 91, both hemispheres 966.0
2727 Male, age 61, right hemisphere 896.4
1863 Male, age 55, unknown 834.0
2115 Male, age 80, left hemisphere 725.7
1968 Male, age 76, left hemisphere 712.2
2787 Female, age 85, both hemispheres 561.0
Pontine raphe nucleus
nTPM: 566.0
2122 Female, age 85, midline 612.1
2853 Male, age 76, midline 519.8
Posteroventral cochlear nucleus
nTPM: 1030.8
2341 Male, age 80, both hemispheres 1528.0
2135 Female, age 91, both hemispheres 1282.9
2070 Male, age 76, both hemispheres 901.6
2371 Male, age 61, both hemispheres 760.9
2752 Female, age 85, both hemispheres 680.4
Prepositus hypoglossal nucleus
nTPM: 994.1
2855 Female, age 85, right hemisphere 1405.4
2086 Male, age 80, both hemispheres 582.8
Principal sensory trigeminal nucleus
nTPM: 729.8
2367 Female, age 91, left hemisphere 1000.6
2008 Male, age 80, left hemisphere 778.4
2158 Male, age 61, both hemispheres 579.7
2324 Male, age 76, both hemispheres 560.4
Reticular pontine nucleus, caudal
nTPM: 997.0
2457 Female, age 91, both hemispheres 1308.5
2559 Male, age 74, both hemispheres 1103.3
2092 Male, age 76, both hemispheres 918.3
2332 Male, age 80, right hemisphere 658.0
Reticular pontine nucleus, oral
nTPM: 1082.3
2361 Male, age 74, both hemispheres 1654.2
2366 Female, age 91, both hemispheres 1072.2
1939 Male, age 80, both hemispheres 1032.3
2012 Female, age 85, both hemispheres 933.7
2167 Male, age 76, both hemispheres 718.9
Reticulotegmental nucleus
nTPM: 689.8
2322 Female, age 91, both hemispheres 893.0
2333 Male, age 80, both hemispheres 810.2
2452 Male, age 74, both hemispheres 681.8
2325 Male, age 76, both hemispheres 374.1
Spinal trigeminal nucleus, caudal
nTPM: 855.8
2312 Male, age 61, both hemispheres 1157.0
2308 Male, age 80, both hemispheres 942.7
2447 Male, age 76, both hemispheres 885.4
2390 Female, age 91, both hemispheres 753.7
2642 Male, age 74, both hemispheres 540.3
Spinal trigeminal nucleus, interpolar
nTPM: 676.3
2386 Female, age 85, both hemispheres 834.5
2033 Male, age 80, both hemispheres 812.5
2389 Female, age 91, both hemispheres 772.3
2066 Male, age 76, right hemisphere 599.1
2625 Male, age 61, both hemispheres 363.2
Spinal trigeminal nucleus, oral
nTPM: 691.0
2164 Male, age 80, both hemispheres 840.0
1978 Male, age 76, both hemispheres 626.5
2737 Female, age 85, both hemispheres 606.3
Spinal vestibular nucleus
nTPM: 862.9
2748 Male, age 76, both hemispheres 1107.7
2806 Female, age 85, both hemispheres 1013.8
2186 Female, age 91, both hemispheres 884.8
2384 Male, age 74, both hemispheres 857.2
2780 Male, age 80, both hemispheres 830.5
2796 Male, age 61, both hemispheres 483.4
Subcoeruleus area
nTPM: 780.6
2369 Female, age 85, left hemisphere 1529.0
1958 Male, age 80, both hemispheres 766.2
2089 Male, age 76, left hemisphere 667.8
2451 Male, age 74, both hemispheres 472.6
2323 Female, age 91, left hemisphere 467.6
Superior olive
nTPM: 917.6
2364 Male, age 74, right hemisphere 1211.4
2020 Male, age 76, both hemispheres 1032.4
2329 Male, age 80, right hemisphere 840.5
1875 Female, age 85, both hemispheres 775.7
2561 Female, age 91, both hemispheres 728.3
Superior vestibular nucleus
nTPM: 759.7
2015 Male, age 80, both hemispheres 979.5
2061 Male, age 76, both hemispheres 688.6
2383 Male, age 74, both hemispheres 610.9
Ventral medullary reticular nucleus
nTPM: 1227.1
2372 Male, age 61, both hemispheres 1421.3
2060 Male, age 76, both hemispheres 1032.9
Ventral periolivary nuclei
nTPM: 744.6
2023 Male, age 76, both hemispheres 1151.0
2165 Male, age 80, both hemispheres 779.6
2794 Female, age 91, left hemisphere 608.1
2130 Female, age 85, both hemispheres 439.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 988.9
2180 Male, age 61, both hemispheres 1220.0
2118 Male, age 80, both hemispheres 1192.1
2741 Female, age 85, both hemispheres 940.2
1986 Male, age 76, both hemispheres 803.4
2302 Female, age 91, both hemispheres 788.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 823.3
2456 Female, age 91, both hemispheres 1155.7
2449 Male, age 74, both hemispheres 818.1
1959 Male, age 76, both hemispheres 803.7
2359 Male, age 61, both hemispheres 751.6
2161 Male, age 80, both hemispheres 710.0
2840 Female, age 85, both hemispheres 700.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 1673.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1673.6
FF:10182-103D2 60 years, female 1703.0
FF:10165-103B3 76 years, female 1644.2
Medulla oblongata
Scaled Tags Per Million: 1516.6
FF:10038-101F2 18-64 years, mixed 1914.2
FF:10174-103C3 60 years, female 1388.7
FF:10155-103A2 76 years, female 1246.8
Pons
Scaled Tags Per Million: 1448.1
FF:10033-101E6 18-54 years, mixed 1448.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 1234.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 1234.8
Samples: 4

Max nTPM: 1509.0
Min nTPM: 817.4
Sample A Female 1365.3
Sample B Female 817.4
Sample C Male 1247.5
Sample D Male 1509.0
Pons
nTPM: 622.7
Samples: 4

Max nTPM: 922.1
Min nTPM: 461.3
Sample A Female 461.3
Sample B Female 493.9
Sample C Male 613.4
Sample D Male 922.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 1013.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 1013.7
Samples: 4

Max nTPM: 1101.6
Min nTPM: 922.1
Sample A Male 974.1
Sample B Male 922.1
Sample C Female 1056.9
Sample D Female 1101.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.8
68795444 Antisense, RP_041130_01_F08, Mouse strain C57BL/6J (56 days, male) 3.8
Pons
Expression energy: 2.4
68795444 Antisense, RP_041130_01_F08, Mouse strain C57BL/6J (56 days, male) 2.4

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