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MYL6
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:491.2 nTPM
FANTOM5:204.5 Scaled Tags Per Million
Pig:295.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA046859Antibody HPA063034
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

491.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 491.2
Samples: 246

Max nTPM: 945.5
Min nTPM: 222.8
Std nTPM: 132.8
Median nTPM: 465.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 945.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 917.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 845.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 844.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 840.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 833.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 824.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 823.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 809.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 808.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 794.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 792.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 775.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 773.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 751.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 733.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 732.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 728.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 697.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 691.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 682.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 668.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 668.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 662.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 656.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 653.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 652.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 651.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 645.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 637.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 632.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 632.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 631.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 630.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 625.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 625.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 623.8
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 619.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 616.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 616.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 610.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 608.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 607.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 606.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 605.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 605.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 598.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 594.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 594.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 592.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 584.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 582.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 580.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 579.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 579.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 578.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 578.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 578.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 575.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 574.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 573.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 570.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 568.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 565.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 564.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 563.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 562.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 555.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 554.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 553.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 551.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 551.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 543.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 538.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 536.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 535.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 533.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 532.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 530.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 529.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 524.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 523.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 523.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 519.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 516.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 515.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 514.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 513.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 511.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 511.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 510.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 509.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 506.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 506.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 502.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 501.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 498.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 497.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 494.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 493.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 493.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 489.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 488.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 487.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 487.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 486.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 486.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 484.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 483.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 482.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 481.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 481.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 477.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 476.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 472.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 472.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 469.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 469.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 469.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 469.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 468.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 468.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 465.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 465.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 463.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 462.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 461.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 461.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 460.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 457.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 456.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 454.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 453.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 453.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 452.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 451.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 451.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 451.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 451.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 450.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 450.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 449.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 449.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 448.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 447.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 447.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 447.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 447.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 446.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 445.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 441.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 437.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 437.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 437.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 436.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 436.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 435.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 434.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 434.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 434.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 433.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 432.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 431.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 430.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 430.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 429.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 428.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 428.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 428.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 423.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 421.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 418.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 418.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 414.5
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 414.3
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 414.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 412.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 412.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 410.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 409.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 409.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 404.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 400.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 398.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 397.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 396.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 395.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 392.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 388.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 387.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 385.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 385.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 384.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 381.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 381.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 379.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 378.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 376.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 376.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 374.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 370.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 370.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 368.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 367.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 367.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 361.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 361.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 357.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 357.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 357.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 356.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 356.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 354.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 353.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 353.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 353.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 350.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 344.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 343.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 342.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 341.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 340.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 339.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 334.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 334.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 331.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 330.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 328.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 326.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 325.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 324.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 321.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 321.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 318.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 317.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 316.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 302.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 301.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 298.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 296.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 296.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 274.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 271.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 262.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 258.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 222.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

204.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 204.5
FF:10164-103B2 76 years, female 204.5

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

295.0
Pig sample Sample description nTPM
Caudate
nTPM: 295.0
Samples: 4

Max nTPM: 351.7
Min nTPM: 253.9
Sample A Female 253.9
Sample B Female 307.5
Sample C Male 351.7
Sample D Male 267.0

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