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TISSUE PRIMARY DATA BASAL GANGLIA Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Consensus:116.4 nTPM
HPA Brain:116.9 nTPM
GTEx:116.4 nTPM
FANTOM5:80.7 Scaled Tags Per Million
Pig:106.0 nTPM
Mouse:113.4 nTPM
Allen mouse:4.5 Expression energy

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001169Antibody CAB011233
Glial cells LowMedium
Neuronal cells MediumLow





BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 79.8
2481 Female, age 94, left hemisphere 103.9
2288 Male, age 75, left hemisphere 83.9
2290 Female, age 72, unknown 81.6
2289 Male, age 61, right hemisphere 78.7
1781 Male, age 74, unknown 75.3
1857 Female, age 85, left hemisphere 72.5
1854 Male, age 80, left hemisphere 71.8
2846 Female, age 79, unknown 70.8
Globus pallidus, externus
nTPM: 116.9
1996 Male, age 80, right hemisphere 153.7
2646 Male, age 61, right hemisphere 134.8
2772 Female, age 79, unknown 128.5
2395 Male, age 75, both hemispheres 89.9
2567 Female, age 72, unknown 77.5
Globus pallidus, internus
nTPM: 116.4
2111 Female, age 85, right hemisphere 138.1
2778 Female, age 91, both hemispheres 129.9
2037 Male, age 80, right hemisphere 121.9
2287 Male, age 75, right hemisphere 118.0
2483 Female, age 94, right hemisphere 109.1
1818 Male, age 74, unknown 103.1
2566 Female, age 72, unknown 94.5
Nucleus accumbens
nTPM: 81.2
2732 Male, age 80, right hemisphere 101.9
2286 Male, age 75, left hemisphere 93.7
2391 Female, age 94, left hemisphere 92.7
2698 Female, age 72, unknown 88.9
1806 Female, age 85, left hemisphere 81.0
1783 Male, age 74, unknown 70.9
2824 Male, age 61, right hemisphere 61.2
1856 Female, age 91, right hemisphere 59.1
Nucleus basalis of Meynert
nTPM: 85.4
2569 Male, age 61, both hemispheres 124.9
2484 Female, age 94, left hemisphere 76.3
2393 Male, age 80, right hemisphere 70.7
2821 Male, age 75, both hemispheres 69.9
Nucleus of the diagonal band
nTPM: 68.9
1979 Male, age 74, unknown 86.8
1812 Female, age 91, both hemispheres 72.4
2195 Female, age 85, both hemispheres 69.3
2775 Male, age 80, right hemisphere 64.0
2029 Male, age 61, right hemisphere 51.9
Putamen
nTPM: 73.4
2482 Female, age 94, left hemisphere 100.5
2489 Female, age 72, unknown 83.5
2647 Male, age 75, left hemisphere 76.1
1829 Male, age 74, unknown 70.5
2466 Female, age 79, unknown 69.1
1937 Female, age 91, right hemisphere 61.9
1838 Male, age 80, right hemisphere 52.4
Septal nuclei
nTPM: 82.8
2199 Male, age 80, right hemisphere 107.2
2059 Female, age 85, both hemispheres 93.9
2394 Male, age 61, left hemisphere 82.3
2629 Female, age 94, right hemisphere 80.9
1960 Male, age 74, unknown 77.4
2009 Female, age 91, both hemispheres 70.7
2031 Female, age 72, unknown 67.3
Stria terminalis, bed nucleus
nTPM: 68.9
2201 Male, age 74, unknown 72.2
1974 Female, age 91, both hemispheres 71.9
2486 Female, age 94, both hemispheres 62.5

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

116.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 105.0
Samples: 246

Max nTPM: 236.0
Min nTPM: 28.7
Std nTPM: 30.8
Median nTPM: 100.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 236.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 203.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 196.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 190.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 184.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 182.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 177.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 173.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 173.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 170.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 168.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 167.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 161.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 158.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 155.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 153.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 153.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 153.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 152.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 151.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 150.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 149.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 147.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 147.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 144.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 144.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 141.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 140.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 138.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 137.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 137.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 136.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 136.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 136.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 136.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 136.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 136.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 136.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 135.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 134.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 132.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 131.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 130.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 130.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 129.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 128.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 128.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 128.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 127.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 127.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 127.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 126.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 125.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 125.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 125.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 125.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 124.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 123.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 123.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 123.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 123.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 122.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 122.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 122.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 122.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 121.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 121.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 121.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 120.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 119.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 118.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 118.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 118.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 117.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 117.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 116.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 115.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 115.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 115.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 115.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 115.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 114.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 114.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 114.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 112.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 112.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 112.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 111.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 111.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 111.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 111.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 110.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 110.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 110.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 110.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 110.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 109.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 109.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 109.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 107.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 107.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 107.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 107.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 107.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 107.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 106.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 106.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 105.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 104.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 104.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 103.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 102.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 102.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 102.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 101.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 101.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 101.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 101.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 101.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 101.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 100.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 100.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 100.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 99.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 99.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 99.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 98.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 97.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 97.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 97.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 97.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 97.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 96.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 96.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 96.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 95.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 95.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 95.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 95.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 94.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 94.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 94.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 94.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 93.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 93.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 93.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 92.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 92.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 92.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 91.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 91.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 91.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 91.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 91.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 90.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 90.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 90.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 90.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 89.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 89.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 89.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 89.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 88.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 88.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 88.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 88.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 87.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 87.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 87.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 87.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 85.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 85.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 85.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 84.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 84.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 84.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 84.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 83.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 83.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 83.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 82.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 81.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 81.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 81.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 81.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 81.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 81.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 80.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 80.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 79.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 79.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 79.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 78.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 77.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 77.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 77.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 77.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 77.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 77.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 76.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 75.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 75.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 75.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 75.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 74.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 73.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 72.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 72.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 71.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 71.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 71.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 70.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 70.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 70.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 69.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 69.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 69.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 69.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 69.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 69.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 68.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 68.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 68.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 68.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 68.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 67.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 65.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 65.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 64.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 62.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 61.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 57.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 56.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 51.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 47.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 44.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 28.7
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 103.1
Samples: 246

Max nTPM: 304.3
Min nTPM: 49.1
Std nTPM: 36.2
Median nTPM: 93.5
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 304.3
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 223.2
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 219.0
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 217.7
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 200.6
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 195.9
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 195.1
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 194.6
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 191.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 186.4
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 185.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 179.8
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 174.3
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 171.4
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 171.3
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 163.3
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 160.0
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 159.3
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 159.2
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 157.4
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 157.1
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 156.6
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 154.2
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 152.4
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 151.9
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 148.5
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 147.4
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 147.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 145.2
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 142.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 142.1
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 142.0
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 141.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 141.0
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 139.8
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 139.6
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 139.4
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 139.2
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 138.4
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 137.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 135.9
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 135.3
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 135.1
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 132.1
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 130.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 129.5
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 128.9
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 128.2
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 127.7
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 127.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 126.9
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 125.7
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 125.4
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 123.7
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 123.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 122.4
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 122.2
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 121.7
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 121.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 120.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 120.4
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 119.2
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 118.1
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 117.4
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 117.3
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 117.1
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 116.8
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 116.8
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 116.7
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 115.2
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 114.0
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 112.3
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 111.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 110.8
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 110.3
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 110.2
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 110.1
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 110.0
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 109.7
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 109.2
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 109.1
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 109.1
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 109.0
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 107.9
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 107.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 107.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 106.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 106.7
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 106.5
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 106.4
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 105.7
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 104.7
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 104.6
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 103.1
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 102.7
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 102.5
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 102.4
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 102.2
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 102.0
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 101.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 100.8
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 100.7
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 100.1
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 99.9
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 99.8
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 99.7
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 99.5
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 99.1
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 98.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 97.7
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 97.5
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 96.9
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 96.4
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 95.3
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 95.3
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 94.8
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 94.7
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 94.5
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 94.4
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 94.3
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 94.1
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 93.9
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 93.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 93.2
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 92.7
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 92.5
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 92.4
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 91.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 91.5
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 91.5
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 91.3
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 91.3
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 91.1
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 91.0
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 91.0
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 90.9
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 90.7
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 90.7
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 90.7
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 90.4
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 90.1
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 89.6
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 89.4
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 89.2
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 89.1
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 88.8
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 88.4
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 88.2
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 88.2
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 87.9
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 87.8
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 87.8
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 87.4
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 87.3
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 87.2
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 86.9
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 86.6
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 86.1
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 85.6
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 85.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 84.8
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 84.6
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 84.3
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 84.3
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 84.0
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 83.9
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 82.8
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 82.5
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 82.1
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 80.8
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 80.7
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 80.5
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 80.2
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 80.0
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 79.8
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 79.8
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 79.6
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 79.6
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 79.1
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 79.0
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 78.8
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 78.7
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 78.5
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 78.3
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 78.1
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 77.7
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 77.6
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 77.3
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 76.9
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 76.9
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 76.0
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 75.9
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 75.8
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 75.3
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 75.2
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 75.1
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 75.0
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 74.8
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 74.8
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 74.8
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 74.5
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 74.2
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 74.0
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 73.9
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 73.5
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 73.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 73.4
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 72.8
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 72.2
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 71.9
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 71.6
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 71.5
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 70.2
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 69.9
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 69.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 69.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 69.2
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 68.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 68.2
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 67.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 67.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 67.0
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 66.9
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 66.8
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 66.7
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 66.2
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 65.1
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 63.5
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 63.4
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 63.1
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 62.6
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 61.6
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 60.5
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 60.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 60.3
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 59.9
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 59.5
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 59.0
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 59.0
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 58.9
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 58.3
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 58.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 54.9
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 54.6
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 49.1
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 49.1
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Brain - Putamen (basal ganglia)
Average nTPM: 116.4
Samples: 205

Max nTPM: 237.6
Min nTPM: 57.0
Std nTPM: 32.9
Median nTPM: 112.3
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 237.6
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 225.3
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 201.4
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 201.2
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 197.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 193.7
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 190.8
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 189.7
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 183.1
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 177.9
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 175.2
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 173.5
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 171.8
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 168.9
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 168.6
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 166.0
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 165.8
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 165.4
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 165.2
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 164.8
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 164.3
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 163.8
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 162.3
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 162.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 161.5
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 159.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 156.7
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 156.4
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 151.4
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 151.1
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 150.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 150.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 149.4
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 148.9
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 148.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 147.7
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 146.9
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 145.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 145.2
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 141.9
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 141.6
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 140.9
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 139.6
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 139.2
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 139.0
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 137.5
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 137.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 137.2
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 136.9
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 136.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 135.6
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 135.5
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 134.9
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 134.5
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 134.3
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 133.9
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 133.5
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 132.3
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 132.0
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 132.0
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 131.2
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 130.3
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 129.7
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 129.3
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 129.2
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 127.3
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 127.1
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 126.9
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 126.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 126.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 125.1
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 124.6
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 124.1
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 122.9
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 122.5
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 122.2
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 120.3
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 120.2
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 120.2
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 119.7
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 119.4
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 119.3
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 119.2
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 117.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 116.5
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 116.3
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 116.3
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 115.8
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 115.8
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 115.6
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 115.5
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 115.1
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 114.1
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 113.9
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 113.8
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 113.7
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 113.5
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 113.3
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 112.9
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 112.8
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 112.5
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 112.4
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 112.3
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 112.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 112.0
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 111.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 110.9
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 110.3
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 110.2
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 109.4
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 109.1
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 108.8
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 108.5
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 108.0
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 106.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 106.3
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 106.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 104.5
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 104.1
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 103.8
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 103.7
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 103.6
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 103.5
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 103.0
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 102.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 102.4
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 102.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 101.4
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 100.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 100.1
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 98.8
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 98.1
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 97.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 97.3
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 97.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 96.9
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 96.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 96.5
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 96.1
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 95.7
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 94.9
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 94.8
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 94.3
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 94.0
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 93.5
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 93.1
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 93.0
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 92.5
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 92.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 92.1
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 91.9
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 91.9
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 91.8
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 91.7
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 91.4
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 91.4
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 91.2
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 90.8
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 89.7
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 89.4
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 89.2
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 89.1
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 88.7
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 88.6
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 88.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 88.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 88.0
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 87.8
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 87.2
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 87.1
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 87.0
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 86.8
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 86.5
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 85.9
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 85.8
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 85.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 85.6
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 85.1
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 84.9
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 83.9
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 83.8
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 82.5
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 82.5
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 81.5
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 81.0
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 80.0
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 78.9
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 77.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 77.1
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 76.5
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 74.1
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 73.9
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 73.8
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 72.9
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 72.1
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 71.4
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 68.9
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 68.6
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 68.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 67.3
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 67.0
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 65.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 64.8
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 57.5
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 57.0
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BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

80.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 77.6
FF:10164-103B2 76 years, female 77.6
Nucleus accumbens
Scaled Tags Per Million: 78.9
FF:10037-101F1 23-56 years, mixed 78.9
Putamen
Scaled Tags Per Million: 58.4
FF:10176-103C5 60 years, female 58.4
Globus pallidus
Scaled Tags Per Million: 80.7
FF:10161-103A8 76 years, female 87.0
FF:10175-103C4 60 years, female 74.5

BASAL GANGLIA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

106.0
Pig sample Sample description nTPM
Caudate
nTPM: 94.5
Samples: 4

Max nTPM: 119.6
Min nTPM: 73.4
Sample A Female 73.4
Sample B Female 99.2
Sample C Male 119.6
Sample D Male 85.6
Putamen
nTPM: 106.0
Samples: 4

Max nTPM: 134.3
Min nTPM: 80.8
Sample A Female 105.4
Sample B Female 80.8
Sample C Male 134.3
Sample D Male 103.6
Septum
nTPM: 90.1
Samples: 4

Max nTPM: 99.3
Min nTPM: 84.4
Sample A Female 87.6
Sample B Female 84.4
Sample C Male 99.3
Sample D Male 89.2
Ventral pallidum
nTPM: 96.2
Samples: 4

Max nTPM: 124.8
Min nTPM: 74.3
Sample A Female 74.3
Sample B Female 99.3
Sample C Male 124.8
Sample D Male 86.3

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

113.4
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 113.4
Samples: 4

Max nTPM: 117.7
Min nTPM: 108.0
Sample A Male 117.7
Sample B Male 117.5
Sample C Female 108.0
Sample D Female 110.3
Septum
nTPM: 77.7
Samples: 4

Max nTPM: 80.5
Min nTPM: 74.4
Sample A Male 80.2
Sample B Male 75.6
Sample C Female 80.5
Sample D Female 74.4
Ventral forebrain
nTPM: 109.2
Samples: 4

Max nTPM: 114.6
Min nTPM: 102.3
Sample A Male 114.6
Sample B Male 102.3
Sample C Female 110.4
Sample D Female 109.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

4.5
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.5
68301371 Antisense, RP_041130_01_B06, Mouse strain C57BL/6J (56 days, male) 4.5
Pallidum
Expression energy: 3.8
68301371 Antisense, RP_041130_01_B06, Mouse strain C57BL/6J (56 days, male) 3.8

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