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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:105.0 nTPM
FANTOM5:77.6 Scaled Tags Per Million
Pig:94.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001169Antibody CAB011233
Glial cells LowMedium
Neuronal cells MediumLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

105.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 105.0
Samples: 246

Max nTPM: 236.0
Min nTPM: 28.7
Std nTPM: 30.8
Median nTPM: 100.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 236.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 203.6
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 196.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 190.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 184.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 182.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 177.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 173.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 173.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 170.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 168.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 167.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 161.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 158.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 155.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 153.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 153.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 153.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 152.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 151.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 150.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 149.8
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 147.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 147.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 144.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 144.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 141.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 140.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 138.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 137.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 137.0
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 136.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 136.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 136.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 136.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 136.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 136.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 136.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 135.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 134.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 132.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 131.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 130.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 130.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 129.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 128.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 128.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 128.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 127.7
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 127.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 127.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 126.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 125.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 125.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 125.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 125.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 124.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 123.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 123.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 123.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 123.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 122.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 122.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 122.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 122.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 121.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 121.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 121.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 121.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 120.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 119.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 118.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 118.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 118.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 117.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 117.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 116.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 115.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 115.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 115.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 115.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 115.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 114.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 114.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 114.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 112.5
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 112.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 112.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 111.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 111.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 111.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 111.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 110.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 110.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 110.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 110.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 110.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 109.7
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 109.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 109.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 107.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 107.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 107.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 107.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 107.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 107.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 106.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 106.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 105.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 104.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 104.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 103.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 102.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 102.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 102.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 101.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 101.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 101.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 101.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 101.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 101.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 100.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 100.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 100.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 99.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 99.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 99.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 98.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 97.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 97.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 97.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 97.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 97.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 96.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 96.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 96.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 95.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 95.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 95.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 95.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 94.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 94.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 94.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 94.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 93.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 93.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 93.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 92.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 92.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 92.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 91.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 91.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 91.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 91.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 91.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 90.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 90.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 90.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 90.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 89.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 89.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 89.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 89.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 88.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 88.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 88.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 88.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 87.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 87.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 87.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 87.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 85.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 85.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 85.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 84.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 84.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 84.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 84.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 83.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 83.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 83.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 82.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 82.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 81.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 81.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 81.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 81.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 81.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 81.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 81.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 80.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 80.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 79.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 79.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 79.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 78.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 77.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 77.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 77.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 77.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 77.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 77.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 76.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 75.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 75.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 75.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 75.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 74.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 73.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 72.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 72.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 71.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 71.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 71.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 70.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 70.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 70.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 69.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 69.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 69.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 69.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 69.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 69.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 68.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 68.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 68.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 68.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 68.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 67.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 65.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 65.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 64.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 62.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 61.8
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 61.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 57.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 56.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 51.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 47.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 44.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 28.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

77.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 77.6
FF:10164-103B2 76 years, female 77.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

94.5
Pig sample Sample description nTPM
Caudate
nTPM: 94.5
Samples: 4

Max nTPM: 119.6
Min nTPM: 73.4
Sample A Female 73.4
Sample B Female 99.2
Sample C Male 119.6
Sample D Male 85.6

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